Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-218g4.2

Gene Name Gene ID Reads Annotation
si:ch211-218g4.2 ENSDARG00000078145 778 si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]










Genes with expression patterns similar to si:ch211-218g4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-218g4.2 ENSDARG00000078145 778 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]
2. pnpla7a ENSDARG00000062986 1793 1.652 - 0.889 - - - 0.763 - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
3. fahd1 ENSDARG00000031657 521 1.649 - 0.863 - - - 0.786 - - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
4. KIAA0355 3250 1.625 - 0.915 - - - - 0.710 - - KIAA0355 ortholog, transcript variant X1
5. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.605 - 0.806 - 0.799 - - - - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
6. fastkd2 ENSDARG00000074031 748 1.597 - - - 0.811 - - 0.786 - - FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
7. WNT7A WNT7A 320 1.597 - 0.897 - - - - 0.700 - -
8. immt ENSDARG00000102874 3435 1.592 - 0.876 - - - - 0.716 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
9. HUS1 ENSDARG00000101611 187 1.591 0.704 0.887 - - - - - - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
10. msrb3 ENSDARG00000045658 988 1.558 0.715 0.843 - - - - - - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
11. snai1a ENSDARG00000056995 1427 1.553 0.758 0.795 - - - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
12. srpx ENSDARG00000010318 946 1.541 - 0.830 - 0.711 - - - - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
13. NAIF1_1 NAIF1_1 1336 1.521 0.757 0.764 - - - - - - -
14. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 0.957 - 0.957 - - - - - - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
15. endog ENSDARG00000058865 679 0.957 - 0.957 - - - - - - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
16. bcs1l ENSDARG00000012295 664 0.956 - 0.956 - - - - - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
17. arid1aa ENSDARG00000101710 3644 0.946 - 0.946 - - - - - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
18. lyrm1 ENSDARG00000026281 303 0.944 - 0.944 - - - - - - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
19. ZNF281 ZNF281 1946 0.94 - 0.940 - - - - - - -
20. map2k2a ENSDARG00000006609 856 0.937 - 0.937 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
21. rrn3 ENSDARG00000102997 721 0.934 - 0.934 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:ZFIN;Acc:ZDB-GENE-080225-1]
22. sppl2 ENSDARG00000030448 1040 0.934 - 0.934 - - - - - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
23. loxl2b ENSDARG00000044074 1919 0.931 - 0.931 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
24. lrrc8da ENSDARG00000103370 676 0.928 - 0.928 - - - - - - - leucine rich repeat containing 8 VRAC subunit Da [Source:ZFIN;Acc:ZDB-GENE-061009-26]
25. nbr1 nbr1 1161 0.928 - 0.928 - - - - - - -
26. ENSDARG00000074705 ENSDARG00000074705 507 0.926 - 0.926 - - - - - - -
27. wwp2 ENSDARG00000061345 3459 0.925 - 0.925 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
28. cdc42ep3 ENSDARG00000052783 1485 0.925 - 0.925 - - - - - - - CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
29. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.924 - 0.924 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
30. CHORDC1 CHORDC1 544 0.922 - 0.922 - - - - - - -
31. coq3 ENSDARG00000069857, ENSDARG00000110000 708 0.922 - 0.922 - - - - - - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
32. hspb9 ENSDARG00000078674 2755 0.92 - 0.920 - - - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
33. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 0.918 - 0.918 - - - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
34. tubg1 ENSDARG00000015610 2433 0.918 - 0.918 - - - - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
35. slbp ENSDARG00000100558 3405 0.916 - 0.916 - - - - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
36. TNPO2 ENSDARG00000042887 2290 0.916 - 0.916 - - - - - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
37. kif2c ENSDARG00000076228 2281 0.916 - 0.916 - - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
38. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 0.916 - 0.916 - - - - - - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
39. cdyl ENSDARG00000038985 441 0.915 - 0.915 - - - - - - - chromodomain protein, Y-like [Source:ZFIN;Acc:ZDB-GENE-070912-561]
40. bccip ENSDARG00000004948 593 0.913 - 0.913 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
41. rb1 ENSDARG00000006782 1445 0.913 - 0.913 - - - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
42. zgc:136892 ENSDARG00000069505 365 0.913 - 0.913 - - - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
43. NAIF1 ENSDARG00000062753 696 0.912 - 0.912 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
44. aldh7a1 ENSDARG00000018426 4637 0.912 - 0.912 - - - - - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
45. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.912 - 0.912 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
46. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.91 - 0.910 - - - - - - - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
47. mgat2 ENSDARG00000052408 264 0.909 - 0.909 - - - - - - - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
48. zzz3 ENSDARG00000077581 1343 0.909 - 0.909 - - - - - - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
49. ldb1a ENSDARG00000010137 3035 0.909 - 0.909 - - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
50. OTTDARG00000032278 OTTDARG00000032278 1016 0.907 - 0.907 - - - - - - -
51. lepr ENSDARG00000070961, ENSDARG00000112744, ENSDARG00000114564 1014 0.907 - 0.907 - - - - - - - leptin receptor [Source:ZFIN;Acc:ZDB-GENE-080104-1]
52. syt16 ENSDARG00000030761 322 0.907 - 0.907 - - - - - - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
53. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.906 - 0.906 - - - - - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
54. C18H16orf70 C18H16orf70 542 0.906 - 0.906 - - - - - - -
55. rab9b ENSDARG00000103391 813 0.906 - 0.906 - - - - - - - RAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
56. cxxc1 cxxc1 914 0.905 - 0.905 - - - - - - -
57. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 0.904 - 0.904 - - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
58. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.904 - 0.904 - - - - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
59. siah1 ENSDARG00000030871 1590 0.903 - 0.903 - - - - - - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
60. vdac1 ENSDARG00000045132 8051 0.903 - 0.903 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
61. lhfp 700 0.903 - 0.903 - - - - - - - lipoma HMGIC fusion partner
62. mto1 ENSDARG00000055679 859 0.903 - 0.903 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
63. BOLA3 ENSDARG00000098130 1340 0.902 - 0.902 - - - - - - - bolA family member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-32]
64. tgm1 ENSDARG00000017799 442 0.902 - 0.902 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
65. COL4A3BP COL4A3BP 3288 0.901 - 0.901 - - - - - - -
66. zgc:162232 zgc:162232 251 0.899 - 0.899 - - - - - - -
67. klf15 ENSDARG00000091127 1037 0.899 - 0.899 - - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
68. ftsjd2 ftsjd2 2694 0.899 - 0.899 - - - - - - -
69. tmem161b ENSDARG00000055989 680 0.899 - 0.899 - - - - - - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
70. mark3 mark3 1375 0.899 - 0.899 - - - - - - -
71. GIT1 ENSDARG00000039489 1157 0.899 - 0.899 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
72. CU861453.1 ENSDARG00000097192 271 0.899 - 0.899 - - - - - - -
73. prelid1b ENSDARG00000044169 501 0.898 - 0.898 - - - - - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
74. smim7 ENSDARG00000074848 1260 0.897 - 0.897 - - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
75. si:dkey-19a16.4 ENSDARG00000071657 190 0.897 - - - 0.897 - - - - - si:dkey-19a16.4 [Source:ZFIN;Acc:ZDB-GENE-050208-652]
76. TNFRSF14_3 TNFRSF14_3 135 0.897 - 0.897 - - - - - - -
77. pltp ENSDARG00000104495 1037 0.897 - 0.897 - - - - - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
78. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 0.897 - 0.897 - - - - - - - BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
79. surf1 ENSDARG00000003592 551 0.896 - 0.896 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
80. ppp1r14bb ENSDARG00000030161 2349 0.896 - 0.896 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
81. tdrd3 ENSDARG00000025421 633 0.896 - 0.896 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
82. creld2 ENSDARG00000029071, ENSDARG00000116264 333 0.896 - 0.896 - - - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
83. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.896 - 0.896 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
84. slc30a9 ENSDARG00000057272 766 0.896 - 0.896 - - - - - - - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
85. ahsa1 ahsa1 2012 0.895 - 0.895 - - - - - - -
86. crcp ENSDARG00000069373 730 0.895 - 0.895 - - - - - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
87. ankrd50l ENSDARG00000007077 1115 0.895 - 0.895 - - - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
88. epb41l4a ENSDARG00000040087 1013 0.895 - 0.895 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
89. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 0.895 - 0.895 - - - - - - - reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
90. matk ENSDARG00000074670 225 0.894 - 0.894 - - - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
91. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 0.894 - 0.894 - - - - - - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
92. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 0.893 - 0.893 - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
93. pou2f1b ENSDARG00000007996 2172 0.893 - 0.893 - - - - - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
94. PHF13 ENSDARG00000102023 1102 0.893 - 0.893 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
95. sc5d ENSDARG00000044642 549 0.893 - 0.893 - - - - - - - sterol-C5-desaturase [Source:ZFIN;Acc:ZDB-GENE-040912-56]
96. si:ch211-198b3.1 si:ch211-198b3.1 765 0.893 - 0.893 - - - - - - -
97. Metazoa_SRP_7 Metazoa_SRP_7 513 0.893 - 0.893 - - - - - - -
98. zdhhc6 ENSDARG00000075721 1494 0.893 - 0.893 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
99. pik3r4 ENSDARG00000060469 381 0.892 - 0.892 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050309-84]
100. ints8 ENSDARG00000057986 1063 0.892 - 0.892 - - - - - - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]

There are 662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA