Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-216b21.2

Gene Name Gene ID Reads Annotation
si:ch211-216b21.2 ENSDARG00000060253 54 si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]










Genes with expression patterns similar to si:ch211-216b21.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-216b21.2 ENSDARG00000060253 54 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
2. cacng3b ENSDARG00000076401 91 2.631 0.904 - - - - 0.790 0.937 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
3. FUT9 FUT9 91 2.594 1.000 - - - - 0.757 0.837 - -
4. CRIP2 ENSDARG00000070670 323 2.494 0.955 - - - - 0.811 0.728 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
5. COX5B ENSDARG00000015978 70 2.493 1.000 - - - - 0.724 0.769 - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
6. ATP6AP1L ATP6AP1L 164 2.481 0.848 - - - - 0.727 0.906 - -
7. CR848045.1 CR848045.1 459 2.393 0.716 - - - - 0.752 0.925 - -
8. diras1a ENSDARG00000028066 126 2.376 0.853 - - - - 0.736 0.787 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
9. NEFH NEFH 101 2.363 0.792 - - - 0.712 - 0.859 - -
10. pou4f2 ENSDARG00000069737 451 2.358 0.951 - - - - 0.701 0.706 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
11. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.304 0.702 - - - - 0.743 0.859 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
12. C8H9orf172 C8H9orf172 113 1.983 1.000 - - - - - 0.983 - -
13. BX470131.1 BX470131.1 86 1.978 1.000 - - - - - 0.978 - -
14. si:dkey-17e6.2 si:dkey-17e6.2 72 1.975 1.000 - - - - - 0.975 - -
15. CABZ01065506.1 CABZ01065506.1 204 1.932 1.000 - - - - - 0.932 - -
16. trim9 ENSDARG00000039123 53 1.917 1.000 - - - - 0.917 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
17. elovl4a ENSDARG00000006773 412 1.885 1.000 - - - - - 0.885 - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
18. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.885 0.939 - - - - - 0.946 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
19. nrg2b ENSDARG00000086585 100 1.884 0.915 - - - - 0.969 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
20. thsd7a thsd7a 194 1.881 - - - - - 0.918 0.963 - -
21. FAXC FAXC 102 1.875 1.000 - - - - 0.875 - - -
22. CR524483.1 ENSDARG00000109248 86 1.873 1.000 - - - - - 0.873 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
23. LRRC4C ENSDARG00000113411 36 1.871 1.000 - - - - 0.871 - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
24. C21H5orf24 C21H5orf24 333 1.871 0.960 - - - - - 0.911 - -
25. PPFIA3 ENSDARG00000077053 310 1.869 0.879 - - - - - 0.990 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
26. BSN_1 BSN_1 21 1.842 - - - - - 0.950 0.892 - -
27. rtn4r ENSDARG00000090035 46 1.84 1.000 - - - - - 0.840 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
28. cbln1 ENSDARG00000057296 165 1.829 0.984 - - - - - 0.845 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
29. ndrg4 ENSDARG00000103937 1234 1.827 0.943 - - - - - 0.884 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
30. scn1bb ENSDARG00000105003 239 1.82 - - - - - 0.864 0.956 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
31. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.818 - - - - - 0.874 0.944 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
32. CAMSAP3 ENSDARG00000059475 263 1.805 - - - - - 0.903 0.902 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
33. WNK2 ENSDARG00000104989 429 1.784 - - - - - 0.892 0.892 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
34. spock2 ENSDARG00000075393 791 1.782 0.835 - - - - - 0.947 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
35. PPP2R5B ENSDARG00000054931 213 1.778 - - - - - 0.843 0.935 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
36. cuedc1a ENSDARG00000068716 232 1.776 - - - - - 0.869 0.907 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
37. dab1b ENSDARG00000003290 7 1.771 0.854 - - - - 0.917 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
38. gsx1 ENSDARG00000035735 1243 1.769 0.780 - - - - - 0.989 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
39. SKOR2 SKOR2 1041 1.768 0.850 - - - - - 0.918 - -
40. nlgn3b ENSDARG00000062376 171 1.765 - - - - - 0.793 0.972 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
41. atpv0e2 ENSDARG00000059057 585 1.765 0.841 - - - - - 0.924 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
42. calb1 ENSDARG00000031598 252 1.758 0.852 - - - - - 0.906 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
43. BRINP3 BRINP3 11 1.757 - - - - - 0.917 0.840 - -
44. si:rp71-36n21.1 93 1.741 0.802 - - - 0.939 - - - - si:rp71-36n21.1
45. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.74 0.821 - - - - - 0.919 - -
46. SV2A ENSDARG00000059945 1278 1.739 0.838 - - - - - 0.901 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
47. tagln3a ENSDARG00000079805 123 1.735 - - - - - 0.927 0.808 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
48. slc1a2b ENSDARG00000102453 3136 1.735 0.780 - - - - - 0.955 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
49. ankk1 ENSDARG00000056921 119 1.735 - - - - 0.853 0.882 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
50. hivep3a ENSDARG00000075928 17 1.735 0.818 - - - - 0.917 - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
51. fsd1 ENSDARG00000062017 207 1.731 - - - - - 0.972 0.759 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
52. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.73 - - - - - 0.846 0.884 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
53. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.729 1.000 - - - - 0.729 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
54. celf4 ENSDARG00000070045 1537 1.729 - - - - - 0.780 0.949 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
55. atp2b3b ENSDARG00000023445 1424 1.728 0.787 - - - - - 0.941 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
56. nptx1l ENSDARG00000074671 569 1.726 0.791 - - - - - 0.935 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
57. scn2b ENSDARG00000101713 796 1.724 - - - - - 0.772 0.952 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
58. gabrg2 ENSDARG00000053665 434 1.724 0.840 - - - - - 0.884 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
59. CSMD1 CSMD1 15 1.724 1.000 - - - - 0.724 - - -
60. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.723 0.730 - - - - - 0.993 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
61. eno2 ENSDARG00000014287 2162 1.721 0.746 - - - - - 0.975 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
62. adam11 ENSDARG00000079204 298 1.72 - - - - - 0.796 0.924 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
63. syt12 ENSDARG00000101776 215 1.719 - - - - - 0.745 0.974 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
64. BX571853.2 ENSDARG00000110441 21 1.719 - - - - - 0.950 0.769 - -
65. NPTXR NPTXR 241 1.718 - - - - - 0.749 0.969 - -
66. nacad ENSDARG00000012347 1268 1.717 0.827 - - - - - 0.890 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
67. add2 ENSDARG00000074581 1402 1.716 0.800 - - - - - 0.916 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
68. sez6l2 ENSDARG00000076052 360 1.715 0.763 - - - - - 0.952 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
69. si:dkey-238f9.1 ENSDARG00000079446 51 1.714 - - 0.896 - - - 0.818 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
70. CABZ01117437.1 CABZ01117437.1 11 1.713 0.945 - - - - 0.768 - - -
71. GADD45G GADD45G 382 1.711 0.813 - - - - - 0.898 - -
72. phactr3a ENSDARG00000058243 150 1.708 - - - - - 0.708 1.000 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
73. kcnk9 ENSDARG00000104563 92 1.706 0.793 - - - - 0.913 - - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
74. zgc:113210 ENSDARG00000002872 99 1.704 1.000 - - - - - 0.704 - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
75. IGLON5 ENSDARG00000022176 1353 1.703 - - - - - 0.739 0.964 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
76. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.701 0.754 - - - - - 0.947 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
77. TUSC3 ENSDARG00000078854 1021 1.699 - - - - - 0.777 0.922 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
78. rusc1 ENSDARG00000078125 617 1.696 0.732 - - - - - 0.964 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
79. CCDC89 CCDC89 40 1.695 - - - - 0.926 - 0.769 - -
80. JAKMIP1 ENSDARG00000076090 55 1.695 - - - - - 0.917 0.778 - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
81. CABZ01029822.1 ENSDARG00000086931 1654 1.693 0.883 - - - - 0.810 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
82. si:ch211-138k19.2 si:ch211-138k19.2 398 1.689 0.735 - - - - - 0.954 - -
83. nhlh2 ENSDARG00000025495 1860 1.684 - - - - - 0.710 0.974 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
84. rac3a ENSDARG00000090062 394 1.684 0.728 - - - - - 0.956 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
85. pou4f1 ENSDARG00000005559 821 1.683 - - - - - 0.734 0.949 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
86. SGSM1_1 SGSM1_1 40 1.682 0.854 - - - - - 0.828 - -
87. rbfox3 rbfox3 1443 1.678 - - - - - 0.719 0.959 - -
88. CR847998.1 ENSDARG00000104784 518 1.67 - - - - - 0.747 0.923 - -
89. cdk5r1b ENSDARG00000045087 2075 1.668 0.791 - - - - - 0.877 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
90. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.664 0.752 - - - - - 0.912 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
91. gng3 ENSDARG00000009553 2530 1.664 - - - - - 0.718 0.946 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
92. BX957322.2 ENSDARG00000095302 68 1.657 0.802 - - - - 0.855 - - -
93. syt3 ENSDARG00000075830 430 1.657 - - - - - 0.816 0.841 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
94. fhdc1 ENSDARG00000074812 934 1.656 0.799 - - - - - 0.857 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
95. map6 map6 70 1.655 - - - - - 0.707 0.948 - -
96. scn8aa ENSDARG00000005775 792 1.654 0.724 - - - - - 0.930 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
97. GABRG1 ENSDARG00000101995 201 1.653 0.722 - - - - - 0.931 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
98. gpr22 gpr22 115 1.652 0.766 - - - - - 0.886 - -
99. pcloa ENSDARG00000063299 353 1.65 0.904 - - - - - 0.746 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
100. ptpreb ENSDARG00000021151 739 1.645 - - - 0.748 - - 0.897 - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]

There are 1656 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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