Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-215c18.3

Gene Name Gene ID Reads Annotation
si:ch211-215c18.3 ENSDARG00000095308 11 si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]










Genes with expression patterns similar to si:ch211-215c18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-215c18.3 ENSDARG00000095308 11 4 1.000 - 1.000 - - - - 1.000 1.000 si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
2. si:dkey-200l5.4 ENSDARG00000095294 13 2 1.000 - - - - - - - 1.000 si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
3. si:dkey-79c1.1 ENSDARG00000093179 11 1.943 1.000 - - - - - - 0.943 - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
4. si:dkey-148e22.3 si:dkey-148e22.3 4 1.921 - - - - - - - 1.000 0.921
5. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.885 1.000 - - - - - - - 0.885 si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
6. ENSDARG00000096199 ENSDARG00000096199 15 1.739 1.000 - - - - - - - 0.739
7. CR388013.3 CR388013.3 45 1.462 - - 0.713 - - - - 0.749 -
8. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
9. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
10. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
11. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
12. taar14j ENSDARG00000075828, ENSDARG00000112737 3 1 - - - - - - - - 1.000 trace amine associated receptor 14j [Source:ZFIN;Acc:ZDB-GENE-041014-34]
13. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
14. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
15. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
16. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
17. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
18. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
19. ccdc79 2 1 - - - - - - - - 1.000 coiled-coil domain containing 79
20. PSMB11 PSMB11 3 1 - - - - - - - - 1.000
21. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
22. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
23. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
24. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
25. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
26. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
27. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
28. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
29. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
30. kcng4 kcng4 37 1 1.000 - - - - - - - -
31. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - - - - - 1.000
32. lppr4a lppr4a 141 1 1.000 - - - - - - - -
33. LRRC38 LRRC38 5 1 - - - - - - - 1.000 -
34. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
35. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
36. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
37. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
38. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
39. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
40. c6ast1 ENSDARG00000069216 8 1 - - - - - - - - 1.000 six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
41. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - - - 1.000 - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
42. CU856520.1 ENSDARG00000098941 2 1 - - - - - - - - 1.000
43. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
44. dapk3 ENSDARG00000074447 12 1 - - - - - - - 1.000 - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
45. eif4e1b ENSDARG00000014565 12 1 - - - - - - - - 1.000 eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
46. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
47. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
48. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
49. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
50. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
51. C24H7orf10 C24H7orf10 7 1 - - - - - - - - 1.000
52. SNORA57 SNORA57 148 1 - - - - - - - 1.000 -
53. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
54. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
55. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - - - - 1.000 -
56. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
57. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
58. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
59. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
60. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
61. ft2 ENSDARG00000109567 5 1 - - - - - - - - 1.000 alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
62. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
63. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
64. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
65. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
66. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
67. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
68. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
69. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
70. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
71. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
72. si:ch73-335d12.2 ENSDARG00000025505 1 1 - - - - - - - 1.000 - si:ch73-335d12.2 [Source:ZFIN;Acc:ZDB-GENE-060503-423]
73. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
74. si:ch211-125e6.5 ENSDARG00000069381 2 1 - - - - - - - 1.000 - si:ch211-125e6.5 [Source:ZFIN;Acc:ZDB-GENE-070912-39]
75. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
76. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
77. CREB3L3 CREB3L3 24 1 - - - - - - - - 1.000
78. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
79. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - - - 1.000 - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
80. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
81. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
82. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
83. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
84. ENSDARG00000029805 ENSDARG00000029805 4 1 - - - - - - - - 1.000
85. si:dkey-14a7.5 si:dkey-14a7.5 1 1 - - - - - - - 1.000 -
86. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
87. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
88. BX321871.2 BX321871.2 1 1 - - - - - - - - 1.000
89. mespab ENSDARG00000068761 1 1 - - - - - - - - 1.000 mesoderm posterior ab [Source:ZFIN;Acc:ZDB-GENE-090817-2]
90. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - - 1.000 - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
91. CR848787.1 CR848787.1 2 1 - - - - - - - - 1.000
92. si:dkey-21p1.3 ENSDARG00000002295 1 1 - - - - - - - - 1.000 si:dkey-21p1.3 [Source:ZFIN;Acc:ZDB-GENE-081105-162]
93. tlr5a ENSDARG00000044415 3 1 - - - - - - - - 1.000 toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
94. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
95. pnp4b ENSDARG00000029230 6 1 - - - - - - - - 1.000 purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
96. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
97. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
98. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
99. BICD1 BICD1 9 1 1.000 - - - - - - - -
100. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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