Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-210c8.5

Gene Name Gene ID Reads Annotation
si:ch211-210c8.5 si:ch211-210c8.5 6










Genes with expression patterns similar to si:ch211-210c8.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-210c8.5 si:ch211-210c8.5 6 4 1.000 - 1.000 1.000 1.000 - - - -
2. olfm3b ENSDARG00000039174 3 1.895 - - 1.000 0.895 - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
3. elovl4a ENSDARG00000006773 412 1.829 1.000 - - - 0.829 - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
4. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.789 0.807 - - - 0.982 - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
5. xkr8.1 ENSDARG00000004498 18 1.785 1.000 - - 0.785 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
6. wfikkn1 ENSDARG00000101364 11 1.714 1.000 - 0.714 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
7. ccdc78 ENSDARG00000030095 8 1.688 - - 0.793 0.895 - - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
8. KCNJ3 KCNJ3 24 1.612 0.854 - - - 0.758 - - - -
9. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
10. si:dkey-92c21.3 si:dkey-92c21.3 2 1 - - 1.000 - - - - - -
11. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
12. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - 1.000 - - - - - -
13. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
14. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
15. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
16. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
17. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
18. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
19. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
20. CU570981.1 CU570981.1 9 1 - - 1.000 - - - - - -
21. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
22. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
23. BICD1 BICD1 9 1 1.000 - - - - - - - -
24. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
25. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
26. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
27. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
28. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
29. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
30. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
31. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
32. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
33. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
34. fam154b fam154b 2 1 - - 1.000 - - - - - -
35. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
36. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
37. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
38. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
39. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
40. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - 1.000 - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
41. twsg1b 7 1 - - 1.000 - - - - - - twisted gastrulation BMP signaling modulator 1b
42. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
43. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
44. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
45. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
46. RGS9BP ENSDARG00000086756 65 1 - - 1.000 - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
47. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
48. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
49. BX950859.2 BX950859.2 10 1 - - 1.000 - - - - - -
50. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
51. CABZ01079442.1 CABZ01079442.1 1 1 - - 1.000 - - - - - -
52. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
53. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
54. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
55. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
56. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
57. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
58. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
59. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
60. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
61. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
62. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
63. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
64. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
65. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
66. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - 1.000 - - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
67. SLC4A8 ENSDARG00000015531 16 1 - - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
68. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
69. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
70. or131-2 ENSDARG00000073812 0 1 - - 1.000 - - - - - - odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
71. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
72. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
73. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
74. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
75. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
76. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
77. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
78. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
79. si:ch211-260c23.1 13 1 - - 1.000 - - - - - - si:ch211-260c23.1, transcript variant X7
80. zgc:153499 ENSDARG00000070166 8 1 - - 1.000 - - - - - - zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]
81. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
82. ROBO3 ENSDARG00000005645 10 1 - - 1.000 - - - - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
83. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
84. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
85. lppr4a lppr4a 141 1 1.000 - - - - - - - -
86. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
87. kcng4 kcng4 37 1 1.000 - - - - - - - -
88. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
89. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
90. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
91. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
92. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
93. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
94. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
95. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
96. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
97. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
98. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
99. si:ch211-234c11.2 ENSDARG00000093041, ENSDARG00000109255 1 1 - - 1.000 - - - - - - si:ch211-234c11.2 [Source:ZFIN;Acc:ZDB-GENE-110914-70]
100. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 1.000 - - - - - - - - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]

There are 536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA