Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209n20.58

Gene Name Gene ID Reads Annotation
si:ch211-209n20.58 si:ch211-209n20.58 1










Genes with expression patterns similar to si:ch211-209n20.58

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209n20.58 si:ch211-209n20.58 1 3 - - - 1.000 - - - 1.000 1.000
2. AL935296.1 AL935296.1 4 2 - - - - - - - 1.000 1.000
3. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
4. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
5. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
6. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
7. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
8. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
9. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
10. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
11. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
12. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
13. snoU109 snoU109 1 1 - - - - - - - 1.000 -
14. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
15. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
16. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
17. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
18. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
19. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
20. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
21. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
22. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
23. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
24. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
25. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
26. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
27. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
28. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
29. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - - 1.000 - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
30. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
31. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - - 1.000
32. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
33. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
34. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - - - 1.000 si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
35. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
36. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
37. zgc:113307 ENSDARG00000044894 17 1 - - - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
38. phc3 ENSDARG00000074604 2 1 - - - - - - - - 1.000 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
39. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
40. CR753866.2 CR753866.2 6 1 - - - - - - - 1.000 -
41. FP245465.3 FP245465.3 5 1 - - - - - - - - 1.000
42. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
43. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
44. gig2j ENSDARG00000069769, ENSDARG00000110674 1 1 - - - - - - - 1.000 - grass carp reovirus (GCRV)-induced gene 2j [Source:ZFIN;Acc:ZDB-GENE-081022-181]
45. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
46. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
47. cabp1b ENSDARG00000033411 2 1 - - - - - - - - 1.000 calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
48. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
49. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
50. U3_6 U3_6 0 1 - - - - - - - - 1.000
51. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
52. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
53. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
54. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
55. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
56. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
57. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
58. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
59. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
60. zgc:158345 2 1 - - - - - - - 1.000 - zgc:158345
61. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
62. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
63. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
64. prkar2ab ENSDARG00000009477 2 1 - - - - - - - - 1.000 protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
65. bicc2_1 ENSDARG00000076557 6 1 - - - 1.000 - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
66. CU638737.1 CU638737.1 17 1 - - - 1.000 - - - - -
67. zgc:113425 ENSDARG00000026616 29 1 - - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
68. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 - - - - - - - 1.000 - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
69. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
70. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - - - 1.000 RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
71. CCDC15 ENSDARG00000067517 28 1 - - - - - - - - 1.000 coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
72. mrap ENSDARG00000091992 9 1 - - - - - - - - 1.000 melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
73. uts1 ENSDARG00000014927 35 1 - - - 1.000 - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
74. srd5a2a ENSDARG00000043587 21 1 - - - 1.000 - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
75. bcdin3d ENSDARG00000074111 0 1 - - - 1.000 - - - - - BCDIN3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-327]
76. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - - - 1.000 odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
77. snoMBII-202_1 snoMBII-202_1 2 1 - - - 1.000 - - - - -
78. try 21 1 - - - - - - - - 1.000 trypsin
79. CT573356.3 CT573356.3 2 1 - - - - - - - - 1.000
80. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
81. or128-1 ENSDARG00000105730 1 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
82. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - - 1.000 si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
83. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
84. fhit ENSDARG00000078195 0 1 - - - - - - - - 1.000 fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
85. CR792453.3 ENSDARG00000110328 5 1 - - - - - - - - 1.000 uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
86. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
87. CENPQ 8 1 - - - 1.000 - - - - - centromere protein Q
88. CR589947.1 ENSDARG00000079269 5 1 - - - - - - - 1.000 -
89. ZNF70 ZNF70 2 1 - - - - - - - - 1.000
90. mespaa ENSDARG00000017078, ENSDARG00000114890 0 1 - - - 1.000 - - - - - mesoderm posterior aa [Source:ZFIN;Acc:ZDB-GENE-000406-8]
91. fam113 ENSDARG00000002685 0 1 - - - - - - - - 1.000 family with sequence similarity 113 [Source:ZFIN;Acc:ZDB-GENE-041212-23]
92. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - 1.000 - - - - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
93. or137-8 ENSDARG00000105705 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
94. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
95. CDR2_1 CDR2_1 8 1 - - - - - - - 1.000 -
96. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - - - - - 1.000 si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
97. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
98. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
99. CR854855.2 CR854855.2 1 1 - - - - - - - - 1.000
100. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA