Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-209j12.3

Gene Name Gene ID Reads Annotation
si:ch211-209j12.3 ENSDARG00000100568 2 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]










Genes with expression patterns similar to si:ch211-209j12.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209j12.3 ENSDARG00000100568 2 2 - - 1.000 - - - - - 1.000 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]
2. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - - - - - 1.000 crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
3. CABZ01067080.1 ENSDARG00000109240 1 1 - - - - - - - - 1.000 interferon-induced very large GTPase 1-like [Source:NCBI gene;Acc:101883914]
4. GCNT4 GCNT4 66 1 - - - - - - - - 1.000
5. mhc1zca ENSDARG00000069471 21 1 - - - - - - - - 1.000 major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
6. nexn_1 ENSDARG00000057317 1 1 - - - - - - - - 1.000 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
7. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - - - - - 1.000 si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
8. lhfpl5b ENSDARG00000056458, ENSDARG00000111760 1 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 5b [Source:ZFIN;Acc:ZDB-GENE-080220-51]
9. CU571333.2 CU571333.2 1 1 - - - - - - - - 1.000
10. MYO15B ENSDARG00000074852 6 1 - - - - - - - - 1.000 myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
11. SLITRK1 2 1 - - - - - - - - 1.000 SLIT and NTRK like family member 1
12. CABZ01073099.1 CABZ01073099.1 1 1 - - - - - - - - 1.000
13. C18H15orf48 C18H15orf48 3 1 - - - - - - - - 1.000
14. cnn1a ENSDARG00000017193 6 1 - - - - - - - - 1.000 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
15. NOX4 3 1 - - - - - - - - 1.000 NADPH oxidase 4
16. RGS14 RGS14 15 1 - - - - - - - - 1.000
17. CR392364.1 CR392364.1 1 1 - - - - - - - - 1.000
18. chia.4 ENSDARG00000008541 14 0.993 - - - - - - - - 0.993 chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
19. gig2n gig2n 5 0.991 - - - - - - - - 0.991
20. spire2 ENSDARG00000003084 6 0.974 - - - - - - - - 0.974 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
21. si:ch211-200o1.1 si:ch211-200o1.1 2 0.972 - - - - - - - - 0.972
22. ZNF135 ZNF135 14 0.972 - - - - - - - - 0.972
23. KBTBD11 ENSDARG00000104958 8 0.971 - - - - - - - - 0.971 kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
24. BX537305.1 ENSDARG00000113834 10 0.966 - - - - - - - - 0.966
25. zgc:173652 22 0.959 - - - - - - - - 0.959 zgc:173652
26. si:dkey-30j10.5 ENSDARG00000093186 13 0.953 - - - - - - - - 0.953 si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
27. slc7a14b ENSDARG00000079231 6 0.936 - - - - - - - - 0.936 solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
28. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 0.93 - - - - - - - - 0.930 zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
29. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.922 - - - - - - - - 0.922
30. FAM177A1 ENSDARG00000079636 19 0.919 - - 0.919 - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
31. si:ch211-271g18.4 ENSDARG00000115564 197 0.911 - - - - - - - - 0.911 si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
32. TNFRSF14_3 TNFRSF14_3 135 0.904 - - - - - - - - 0.904
33. cpne5 cpne5 16 0.897 - - - - - - - - 0.897
34. CR848814.2 CR848814.2 19 0.889 - - - - - - - - 0.889
35. tg ENSDARG00000020084 40 0.873 - - - - - - - - 0.873 thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
36. sgms2 57 0.869 - - - - - - - - 0.869 sphingomyelin synthase 2, transcript variant X1
37. CD109 ENSDARG00000060609 34 0.868 - - 0.868 - - - - - - CD109 molecule [Source:ZFIN;Acc:ZDB-GENE-120215-253]
38. lyve1b ENSDARG00000062483 14 0.866 - - - - - - - - 0.866 lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
39. bcan ENSDARG00000099412 18 0.86 - - 0.860 - - - - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
40. slco4a1 ENSDARG00000075948 74 0.857 - - - - - - - - 0.857 solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
41. CCDC171 ENSDARG00000027381 3 0.855 - - 0.855 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
42. CACNA2D1_1 ENSDARG00000073752 2 0.855 - - 0.855 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
43. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 0.855 - - 0.855 - - - - - -
44. BX927253.1 ENSDARG00000096072 1 0.855 - - 0.855 - - - - - -
45. pou4f3 ENSDARG00000006206 8 0.855 - - 0.855 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
46. HTRA2_8 HTRA2_8 0 0.855 - - 0.855 - - - - - -
47. si:dkey-188i13.8 ENSDARG00000092725 1 0.855 - - 0.855 - - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
48. ttc6 ENSDARG00000104125 7 0.855 - - 0.855 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
49. tyro3 ENSDARG00000005356 4 0.855 - - 0.855 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
50. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 0.855 - - 0.855 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
51. GARNL3 GARNL3 1 0.855 - - 0.855 - - - - - -
52. FHDC1 ENSDARG00000074812 2 0.855 - - 0.855 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
53. PEG3_36 PEG3_36 3 0.855 - - 0.855 - - - - - -
54. RASAL1 0 0.855 - - 0.855 - - - - - - RAS protein activator like 1
55. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 0.855 - - 0.855 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
56. abhd10a ENSDARG00000076435 3 0.855 - - 0.855 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
57. CABZ01088508.1 CABZ01088508.1 0 0.855 - - 0.855 - - - - - -
58. si:ch211-181l5.5 si:ch211-181l5.5 0 0.855 - - 0.855 - - - - - -
59. STRC ENSDARG00000105391 10 0.855 - - 0.855 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
60. syne2a_1 0 0.855 - - 0.855 - - - - - - spectrin repeat containing, nuclear envelope 2a
61. panx3 ENSDARG00000004627 7 0.855 - - 0.855 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
62. mxd ENSDARG00000023369 8 0.855 - - 0.855 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
63. CR626884.3 ENSDARG00000104648 1 0.855 - - 0.855 - - - - - -
64. CR536621.1 CR536621.1 2 0.855 - - 0.855 - - - - - -
65. si:ch211-215m21.27 si:ch211-215m21.27 3 0.855 - - 0.855 - - - - - -
66. pcdh2g12 5 0.855 - - 0.855 - - - - - - protocadherin 2 gamma 12
67. CABZ01012080.1 CABZ01012080.1 10 0.855 - - 0.855 - - - - - -
68. si:ch211-196h16.4 ENSDARG00000094782 0 0.855 - - 0.855 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
69. STOX2 STOX2 0 0.855 - - 0.855 - - - - - -
70. CU695076.1 CU695076.1 7 0.855 - - 0.855 - - - - - -
71. U4_1 U4_1 2 0.855 - - 0.855 - - - - - -
72. zgc:174642_2 zgc:174642_2 1 0.855 - - 0.855 - - - - - -
73. si:rp71-1h20.2 si:rp71-1h20.2 0 0.855 - - 0.855 - - - - - -
74. kcnq3 ENSDARG00000060085 0 0.855 - - 0.855 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
75. CABZ01079302.1 ENSDARG00000103230 2 0.855 - - 0.855 - - - - - -
76. SNORA53 SNORA53 10 0.855 - - 0.855 - - - - - -
77. zgc:114037_5 6 0.855 - - 0.855 - - - - - - zgc:114037
78. zgc:162322 zgc:162322 1 0.855 - - 0.855 - - - - - -
79. si:ch211-274f20.4 si:ch211-274f20.4 0 0.855 - - 0.855 - - - - - -
80. ralgps1 ENSDARG00000068370 39 0.855 - - 0.855 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
81. si:dkey-191j3.2 ENSDARG00000101997 1 0.855 - - 0.855 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
82. si:ch211-285c6.2 ENSDARG00000079234 1 0.855 - - 0.855 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
83. CR356247.1 CR356247.1 2 0.855 - - 0.855 - - - - - -
84. KCNJ3_1 KCNJ3_1 30 0.855 - - 0.855 - - - - - -
85. si:ch73-36i7.2 si:ch73-36i7.2 5 0.855 - - 0.855 - - - - - -
86. CR855307.2 CR855307.2 1 0.855 - - 0.855 - - - - - -
87. fn3krp ENSDARG00000098208 4 0.855 - - 0.855 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
88. gata2b ENSDARG00000009094 16 0.855 - - 0.855 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
89. si:dkey-165g20.2 si:dkey-165g20.2 3 0.855 - - 0.855 - - - - - -
90. si:rp71-7l19.7 si:rp71-7l19.7 1 0.855 - - 0.855 - - - - - -
91. si:dkey-26i24.1 ENSDARG00000102673 4 0.855 - - 0.855 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
92. zgc:174311 zgc:174311 3 0.855 - - 0.855 - - - - - -
93. si:dkey-16j24.1 2 0.855 - - 0.855 - - - - - - si:dkey-16j24.1, transcript variant X1
94. CU138503.2 CU138503.2 0 0.855 - - 0.855 - - - - - -
95. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 0.855 - - 0.855 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
96. hsf5 ENSDARG00000104686 9 0.855 - - 0.855 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
97. CABZ01087111.1 CABZ01087111.1 42 0.855 - - 0.855 - - - - - -
98. hbaa2 ENSDARG00000069735 10 0.855 - - 0.855 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
99. si:dkey-211e20.3 si:dkey-211e20.3 1 0.855 - - 0.855 - - - - - -
100. CU468041.1 ENSDARG00000092125 1 0.855 - - 0.855 - - - - - -

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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