Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209a2.1

Gene Name Gene ID Reads Annotation
si:ch211-209a2.1 250 si:ch211-209a2.1, transcript variant X2










Genes with expression patterns similar to si:ch211-209a2.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209a2.1 250 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-209a2.1, transcript variant X2
2. esrrgb ENSDARG00000011696 108 2.596 0.966 0.779 - - - 0.851 - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
3. acot11b ENSDARG00000042122 235 1.854 0.916 - - - - 0.938 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
4. asb6 ENSDARG00000007125 389 1.778 0.984 - - - - - - 0.794 - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
5. rdh5 ENSDARG00000008306 272 1.774 0.955 - - - - 0.819 - - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
6. dgat1a ENSDARG00000103503 63 1.772 0.986 - - - - 0.786 - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
7. pole ENSDARG00000058533, ENSDARG00000115430 381 1.75 0.977 - - 0.773 - - - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
8. PTDSS2 ENSDARG00000101018 881 1.738 0.955 - - - - 0.783 - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
9. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 1.714 0.988 - - - - 0.726 - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
10. zgc:100868 ENSDARG00000004748 2582 1.703 0.875 - - - - 0.828 - - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
11. KHDRBS3 ENSDARG00000101020 408 1.69 - 0.865 - 0.825 - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
12. ppp1r12c ENSDARG00000052423 183 1.682 - - - 0.818 - 0.864 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
13. wfdc1 ENSDARG00000058003 850 1.675 0.969 0.706 - - - - - - - WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
14. CABZ01057013.1 CABZ01057013.1 1308 1.669 0.895 - - 0.774 - - - - -
15. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.664 - - - - - 0.840 - 0.824 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
16. il6r ENSDARG00000104474 150 1.66 - - - - - 0.903 - 0.757 - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
17. slmapa ENSDARG00000054458 966 1.653 0.786 - - - - 0.867 - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
18. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 1.651 - - - - - 0.839 - 0.812 - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
19. rassf10a 417 1.647 0.925 - - - - 0.722 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
20. plekhf2 ENSDARG00000021141 529 1.638 0.857 - - - - 0.781 - - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
21. DIP2B DIP2B 18 1.638 - - - - - - 0.789 0.849 -
22. si:dkey-191g9.5 ENSDARG00000056080 60 1.632 - - - - - 0.791 - 0.841 - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
23. slx4ip ENSDARG00000039069 260 1.631 - - - - - 0.784 - 0.847 - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
24. FAM20A ENSDARG00000079486 61 1.603 - 0.773 - - - 0.830 - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
25. CABZ01073174.1 CABZ01073174.1 581 1.601 0.888 - - - - 0.713 - - -
26. foxf1 ENSDARG00000015399 205 1.6 - 0.842 - - - 0.758 - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
27. BX537137.1 ENSDARG00000092436 77 1.582 - - - 0.767 - 0.815 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
28. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 1.571 - - - 0.855 - 0.716 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
29. si:ch211-190k17.19 ENSDARG00000095756 19 1.57 - - - - - 0.729 - 0.841 - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
30. srsf9 ENSDARG00000008097 2405 1.565 0.861 - - - - 0.704 - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
31. gcm2 ENSDARG00000045413 417 1.553 0.773 - - - - 0.780 - - - glial cells missing homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050127-1]
32. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.55 0.838 - - - - 0.712 - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
33. wu:fb52c12 wu:fb52c12 763 1.541 - - - 0.751 - 0.790 - - -
34. rps6kb1a ENSDARG00000018399 627 1.535 0.769 - - 0.766 - - - - - ribosomal protein S6 kinase b, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-091113-52]
35. adamts9 ENSDARG00000077778 419 1.531 - 0.726 - - - - - 0.805 - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
36. fastkd1 ENSDARG00000056128 141 1.528 - - - - - 0.710 - 0.818 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
37. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 1.518 - - - - - 0.709 0.809 - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
38. mir10b-2 116 1.516 - 0.727 - - - - 0.789 - - microRNA 10b-2
39. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.515 - - - - - 0.724 0.791 - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
40. CABZ01030094.1 CABZ01030094.1 98 1.508 - - - - - 0.768 0.740 - -
41. si:dkey-183n20.15 ENSDARG00000094265 190 1.505 - 0.753 - - - 0.752 - - - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
42. tfap2a ENSDARG00000059279 3741 1.496 0.762 - - - - 0.734 - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
43. zgc:101566 ENSDARG00000086342 363 1.494 - - - 0.783 - 0.711 - - - zgc:101566 [Source:ZFIN;Acc:ZDB-GENE-041010-73]
44. ches1 ENSDARG00000043553 96 1.49 - - - 0.758 - - 0.732 - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
45. nup107 ENSDARG00000016010 1043 1.49 - 0.735 - - - 0.755 - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
46. tgm5l ENSDARG00000098837 174 1.483 - - - 0.721 - 0.762 - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
47. FAM69A FAM69A 28 1.479 - - - - - - 0.740 0.739 -
48. ACVR1B ACVR1B 4824 1.438 0.717 - - - - 0.721 - - -
49. BX005272.1 BX005272.1 553 1.416 - - - 0.708 - - - 0.708 -
50. CABZ01020207.1 CABZ01020207.1 145 0.993 0.993 - - - - - - - -
51. exd3 ENSDARG00000063140 119 0.992 0.992 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
52. brf1a ENSDARG00000017835 206 0.991 0.991 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
53. si:ch211-229b6.1 ENSDARG00000093422 151 0.991 0.991 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
54. plekhg7 ENSDARG00000062855 308 0.99 0.990 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
55. pou5f3 ENSDARG00000044774 212 0.99 0.990 - - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
56. gne ENSDARG00000099771 617 0.99 0.990 - - - - - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
57. si:dkey-164n2.1 47 0.99 0.990 - - - - - - - - si:dkey-164n2.1, transcript variant X1
58. si:ch211-191a16.5 ENSDARG00000096545 45 0.989 0.989 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
59. si:dkey-58f10.12 ENSDARG00000092680 258 0.989 0.989 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
60. si:dkey-7i1.4 si:dkey-7i1.4 77 0.989 0.989 - - - - - - - -
61. TMEM220 ENSDARG00000088981 28 0.989 0.989 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
62. mnd1 ENSDARG00000074451 182 0.989 0.989 - - - - - - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
63. C17H14orf1 C17H14orf1 256 0.989 0.989 - - - - - - - -
64. tvp23b ENSDARG00000057060 361 0.989 0.989 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
65. gpr78 gpr78 135 0.989 0.989 - - - - - - - -
66. zgc:85932 ENSDARG00000098239 373 0.988 0.988 - - - - - - - - zgc:85932 [Source:ZFIN;Acc:ZDB-GENE-040426-2460]
67. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.988 0.988 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
68. baiap2l1a ENSDARG00000029305 30 0.988 0.988 - - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
69. TMEM55B TMEM55B 76 0.987 0.987 - - - - - - - -
70. RFESD_1 RFESD_1 65 0.987 0.987 - - - - - - - -
71. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.987 0.987 - - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
72. rnf152 ENSDARG00000087782 141 0.987 0.987 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
73. zgc:101562 ENSDARG00000040179 90 0.987 0.987 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]
74. CU468896.2 CU468896.2 38 0.987 0.987 - - - - - - - -
75. nle1 ENSDARG00000057105 522 0.987 0.987 - - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
76. TMEM151A ENSDARG00000077986 78 0.987 0.987 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
77. nek1 ENSDARG00000022350 158 0.986 0.986 - - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
78. acp6 ENSDARG00000040064 197 0.986 0.986 - - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
79. EPHA2 EPHA2 867 0.986 0.986 - - - - - - - -
80. me3 ENSDARG00000002305 3305 0.986 0.986 - - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
81. sft2d3 ENSDARG00000070284 351 0.986 0.986 - - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
82. stm ENSDARG00000035694 1567 0.985 0.985 - - - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
83. ppfibp2a ENSDARG00000061977 199 0.984 0.984 - - - - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
84. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.984 0.984 - - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
85. ap2m1b ENSDARG00000033899 317 0.982 0.982 - - - - - - - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
86. kcnk5b ENSDARG00000012390 294 0.982 0.982 - - - - - - - - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
87. zgc:173726 ENSDARG00000077078 250 0.981 0.981 - - - - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
88. arfrp1 ENSDARG00000057857 2840 0.981 0.981 - - - - - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
89. lygl1 ENSDARG00000056874 309 0.981 0.981 - - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
90. itgb1b ENSDARG00000104484 51 0.981 0.981 - - - - - - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
91. BX539313.3 ENSDARG00000098016 638 0.981 0.981 - - - - - - - -
92. C22H19orf26 C22H19orf26 66 0.98 0.980 - - - - - - - -
93. myo1ea ENSDARG00000036179 891 0.98 0.980 - - - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
94. pho ENSDARG00000035133 670 0.979 0.979 - - - - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
95. rspry1 ENSDARG00000062558 1424 0.979 0.979 - - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
96. MYH9 MYH9 158 0.979 0.979 - - - - - - - -
97. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.978 0.978 - - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
98. strada ENSDARG00000037929 1614 0.978 0.978 - - - - - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
99. tpst1l ENSDARG00000044513 1339 0.977 0.977 - - - - - - - - tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
100. itgb1bp1 ENSDARG00000007169 2723 0.975 0.975 - - - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]

There are 1385 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA