Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-200o1.1

Gene Name Gene ID Reads Annotation
si:ch211-200o1.1 si:ch211-200o1.1 2










Genes with expression patterns similar to si:ch211-200o1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-200o1.1 si:ch211-200o1.1 2 2 - - - - 1.000 - - - 1.000
2. si:ch211-12e13.4 si:ch211-12e13.4 0 1 - - - - 1.000 - - - -
3. mgp ENSDARG00000086189 9 1 - - - - 1.000 - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
4. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - 1.000 - - - -
5. ZNF135 ZNF135 14 1 - - - - - - - - 1.000
6. CABZ01038329.1 CABZ01038329.1 8 1 - - - - 1.000 - - - -
7. smtna ENSDARG00000074652 6 1 - - - - 1.000 - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
8. si:dkey-30f3.2 ENSDARG00000098087 6 1 - - - - 1.000 - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
9. adgra1a ENSDARG00000054177 19 0.984 - - - - 0.984 - - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
10. cryabb ENSDARG00000101380, ENSDARG00000109545 8 0.972 - - - - - - - - 0.972 crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
11. CABZ01067080.1 ENSDARG00000109240 1 0.972 - - - - - - - - 0.972 interferon-induced very large GTPase 1-like [Source:NCBI gene;Acc:101883914]
12. GCNT4 GCNT4 66 0.972 - - - - - - - - 0.972
13. mhc1zca ENSDARG00000069471 21 0.972 - - - - - - - - 0.972 major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
14. nexn_1 ENSDARG00000057317 1 0.972 - - - - - - - - 0.972 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
15. si:dkey-49n23.3 ENSDARG00000095325 4 0.972 - - - - - - - - 0.972 si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
16. lhfpl5b ENSDARG00000056458, ENSDARG00000111760 1 0.972 - - - - - - - - 0.972 LHFPL tetraspan subfamily member 5b [Source:ZFIN;Acc:ZDB-GENE-080220-51]
17. MYO15B ENSDARG00000074852 6 0.972 - - - - - - - - 0.972 myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
18. CU571333.2 CU571333.2 1 0.972 - - - - - - - - 0.972
19. CABZ01073099.1 CABZ01073099.1 1 0.972 - - - - - - - - 0.972
20. C18H15orf48 C18H15orf48 3 0.972 - - - - - - - - 0.972
21. SLITRK1 2 0.972 - - - - - - - - 0.972 SLIT and NTRK like family member 1
22. cnn1a ENSDARG00000017193 6 0.972 - - - - - - - - 0.972 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
23. CR392364.1 CR392364.1 1 0.972 - - - - - - - - 0.972
24. si:ch211-209j12.3 ENSDARG00000100568 2 0.972 - - - - - - - - 0.972 si:ch211-209j12.3 [Source:ZFIN;Acc:ZDB-GENE-120709-21]
25. NOX4 3 0.972 - - - - - - - - 0.972 NADPH oxidase 4
26. RGS14 RGS14 15 0.972 - - - - - - - - 0.972
27. chia.4 ENSDARG00000008541 14 0.966 - - - - - - - - 0.966 chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
28. gig2n gig2n 5 0.963 - - - - - - - - 0.963
29. rs1 rs1 70 0.958 - - - - 0.958 - - - -
30. fam131c ENSDARG00000037320 6 0.958 - - - - 0.958 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
31. spire2 ENSDARG00000003084 6 0.947 - - - - - - - - 0.947 spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
32. KBTBD11 ENSDARG00000104958 8 0.943 - - - - - - - - 0.943 kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
33. tmem125b ENSDARG00000075980 2 0.942 - - - - 0.942 - - - - transmembrane protein 125b [Source:ZFIN;Acc:ZDB-GENE-080220-54]
34. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.938 - - - - 0.938 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
35. BX537305.1 ENSDARG00000113834 10 0.938 - - - - - - - - 0.938
36. zgc:173652 22 0.931 - - - - - - - - 0.931 zgc:173652
37. si:dkey-30j10.5 ENSDARG00000093186 13 0.926 - - - - - - - - 0.926 si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
38. syt5b ENSDARG00000011640 70 0.916 - - - - 0.916 - - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
39. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 0.915 - - - - 0.915 - - - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
40. slc7a14b ENSDARG00000079231 6 0.908 - - - - - - - - 0.908 solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
41. dbh ENSDARG00000069446, ENSDARG00000114942 60 0.905 - - - - 0.905 - - - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
42. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 0.903 - - - - - - - - 0.903 zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
43. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.895 - - - - - - - - 0.895
44. CABZ01075242.1 ENSDARG00000114227 9 0.895 - - - - - - - - 0.895
45. si:ch211-271g18.4 ENSDARG00000115564 197 0.884 - - - - - - - - 0.884 si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
46. TNFRSF14_3 TNFRSF14_3 135 0.878 - - - - - - - - 0.878
47. th ENSDARG00000030621, ENSDARG00000109947 6 0.873 - - - - 0.873 - - - - tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
48. cpne5 cpne5 16 0.871 - - - - - - - - 0.871
49. si:dkey-58f10.13 ENSDARG00000095532 11 0.871 - - - - - - - - 0.871 si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
50. CR848814.2 CR848814.2 19 0.862 - - - - - - - - 0.862
51. CCL-C11B CCL-C11B 51 0.856 - - - - - - - - 0.856
52. slco4a1 ENSDARG00000075948 74 0.855 - - - - - - - - 0.855 solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
53. slc6a2 ENSDARG00000016141 49 0.85 - - - - 0.850 - - - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
54. tg ENSDARG00000020084 40 0.847 - - - - - - - - 0.847 thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
55. trhrb ENSDARG00000036159 11 0.843 - - - - 0.843 - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
56. sgms2 57 0.842 - - - - - - - - 0.842 sphingomyelin synthase 2, transcript variant X1
57. lyve1b ENSDARG00000062483 14 0.841 - - - - - - - - 0.841 lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
58. acta2 ENSDARG00000045180 96 0.839 - - - - 0.839 - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
59. ETV3L ETV3L 67 0.824 - - - - 0.824 - - - -
60. p2rx8 ENSDARG00000024139 25 0.817 - - - - - - - - 0.817 purinergic receptor P2X, ligand-gated ion channel, 8 [Source:ZFIN;Acc:ZDB-GENE-030319-7]
61. kcnab1 kcnab1 10 0.814 - - - - - - - - 0.814
62. si:dkey-250k15.4 ENSDARG00000092169 19 0.812 - - - - - - - - 0.812 si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
63. si:ch211-260o22.1 si:ch211-260o22.1 34 0.808 - - - - 0.808 - - - -
64. si:dkey-15h8.6 si:dkey-15h8.6 13 0.806 - - - - 0.806 - - - -
65. p4ha3 ENSDARG00000103692 2 0.806 - - - - 0.806 - - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]
66. chrnb3b ENSDARG00000038508 7 0.802 - - - - - - - - 0.802 cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
67. pax1b ENSDARG00000073814 105 0.799 - - - - 0.799 - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
68. ENSDARG00000088389 ENSDARG00000088389 2 0.78 - - - - 0.780 - - - -
69. CT027754.1 CT027754.1 0 0.78 - - - - 0.780 - - - -
70. si:dkey-172k15.6 ENSDARG00000095717 0 0.78 - - - - 0.780 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
71. zgc:172131 ENSDARG00000076269 32 0.78 - - - - 0.780 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
72. CR356223.2_1 ENSDARG00000100655 1 0.78 - - - - 0.780 - - - -
73. taar20t ENSDARG00000095035 1 0.78 - - - - 0.780 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
74. CR352258.1 CR352258.1 3 0.78 - - - - 0.780 - - - -
75. si:ch73-27e22.2 ENSDARG00000092266 8 0.78 - - - - 0.780 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
76. si:ch211-198e13.3 5 0.78 - - - - 0.780 - - - - si:ch211-198e13.3, transcript variant X1
77. rbm22 ENSDARG00000010238 523 0.78 - - - - 0.780 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
78. MMP25 MMP25 0 0.78 - - - - 0.780 - - - -
79. ftr55 ENSDARG00000009161 3 0.78 - - - - 0.780 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
80. ssh1a ENSDARG00000056780 3 0.78 - - - - 0.780 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
81. trim35-21 ENSDARG00000102303 7 0.78 - - - - 0.780 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
82. trpm3 ENSDARG00000039181 2 0.78 - - - - 0.780 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
83. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 0.78 - - - - 0.780 - - - -
84. si:ch73-17k20.1 si:ch73-17k20.1 2 0.78 - - - - 0.780 - - - -
85. si:ch73-94f11.5 si:ch73-94f11.5 6 0.78 - - - - 0.780 - - - -
86. grm3 ENSDARG00000031712, ENSDARG00000110535 30 0.78 - - - - 0.780 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
87. nudt4b ENSDARG00000045878 10 0.78 - - - - 0.780 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
88. sele ENSDARG00000009123 122 0.78 - - - - 0.780 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
89. si:ch211-120f16.3 si:ch211-120f16.3 0 0.78 - - - - 0.780 - - - -
90. CU633740.1 CU633740.1 8 0.78 - - - - 0.780 - - - -
91. si:dkey-286j17.3 si:dkey-286j17.3 8 0.78 - - - - 0.780 - - - -
92. mlphb ENSDARG00000062481 14 0.78 - - - - 0.780 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
93. si:dkey-252l8.1 si:dkey-252l8.1 2 0.78 - - - - 0.780 - - - -
94. BX546446.1 BX546446.1 0 0.78 - - - - 0.780 - - - -
95. CSF3 CSF3 4 0.78 - - - - 0.780 - - - -
96. edn3b ENSDARG00000086669 8 0.78 - - - - 0.780 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
97. cpdb ENSDARG00000053877 5 0.78 - - - - 0.780 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
98. BX842593.1 BX842593.1 0 0.78 - - - - 0.780 - - - -
99. U1_16 U1_16 0 0.78 - - - - 0.780 - - - -
100. si:ch211-86k6.3 si:ch211-86k6.3 1 0.78 - - - - 0.780 - - - -

There are 135 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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