Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-199m9.3

Gene Name Gene ID Reads Annotation
si:ch211-199m9.3 50 si:ch211-199m9.3, transcript variant X3










Genes with expression patterns similar to si:ch211-199m9.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-199m9.3 50 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-199m9.3, transcript variant X3
2. CR790363.1 ENSDARG00000097364 145 2.623 - - - 0.888 - 0.911 0.824 - -
3. tnfsf13b ENSDARG00000012945 54 2.282 - - - - - 0.790 - 0.786 0.706 TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
4. scospondin ENSDARG00000067859 4 1.911 - - - - 1.000 0.911 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
5. CABZ01065246.2 CABZ01065246.2 45 1.892 - - - - 1.000 0.892 - - -
6. BX569789.4 BX569789.4 3 1.882 - - - - 1.000 0.882 - - -
7. LPXN ENSDARG00000079315 12 1.878 - - - - 1.000 - 0.878 - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
8. rp1 ENSDARG00000077687 18 1.824 0.866 - - - - - 0.958 - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
9. C11H1orf116 C11H1orf116 9 1.777 0.866 - - - - 0.911 - - -
10. npdc1 npdc1 221 1.775 0.866 - - 0.909 - - - - -
11. sesn2 ENSDARG00000070012 294 1.76 - 0.982 - - - 0.778 - - - sestrin 2 [Source:ZFIN;Acc:ZDB-GENE-070108-1]
12. nlgn3a ENSDARG00000104786 91 1.758 0.907 - - 0.851 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
13. zfyve26 ENSDARG00000040131 87 1.754 0.954 - - 0.800 - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
14. PLA2G4C_2 PLA2G4C_2 10 1.753 - 0.753 - - 1.000 - - - -
15. TEAD1 TEAD1 43 1.747 0.866 - - - - 0.881 - - -
16. UBAC2 ENSDARG00000093065, ENSDARG00000116281, ENSDARG00000116596 16 1.739 - - - - - 0.970 - - 0.769 UBA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-2122]
17. CABZ01084613.1 CABZ01084613.1 22 1.729 - - - - 0.837 0.892 - - -
18. ppp1r42 ENSDARG00000057632 32 1.719 0.852 - - - - 0.867 - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
19. MFAP4_7 MFAP4_7 43 1.714 0.919 - - - - - - - 0.795
20. camk2b1 ENSDARG00000011065 79 1.704 0.804 - - - - 0.900 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
21. si:ch211-197n1.2 58 1.691 0.949 0.742 - - - - - - - si:ch211-197n1.2, transcript variant X1
22. ccdc80l2 ENSDARG00000044695 150 1.69 - 0.794 - 0.896 - - - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
23. BX005085.3 ENSDARG00000103450 45 1.683 0.772 - - - - 0.911 - - -
24. ccbl1 702 1.668 0.849 - - - - 0.819 - - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
25. FP236810.2 ENSDARG00000113218 140 1.663 0.839 - - - - 0.824 - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
26. PMFBP1 ENSDARG00000101917 292 1.66 0.879 - - - - - 0.781 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
27. mctp2b ENSDARG00000073970 238 1.649 0.853 - - - - 0.796 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
28. FHOD1 ENSDARG00000051768 43 1.646 - - - - 0.759 0.887 - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
29. CT573393.1 CT573393.1 97 1.642 0.742 - - 0.900 - - - - -
30. BX649554.3_1 BX649554.3_1 1071 1.64 0.802 - - - - 0.838 - - -
31. slc6a6a ENSDARG00000012534 183 1.64 - 0.734 - - - 0.906 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
32. si:dkey-58f10.6 ENSDARG00000094489 123 1.64 - 0.798 - - - - 0.842 - - si:dkey-58f10.6 [Source:ZFIN;Acc:ZDB-GENE-060526-320]
33. si:ch211-255g12.9 si:ch211-255g12.9 78 1.63 - - - 0.857 - 0.773 - - -
34. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.625 0.912 - - - 0.713 - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
35. lamb1a_1 ENSDARG00000101209 13 1.619 0.866 0.753 - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
36. ches1 ENSDARG00000043553 96 1.614 - - - 0.798 - 0.816 - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
37. pde12 ENSDARG00000030964 615 1.604 - - - - - 0.840 - - 0.764 phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
38. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.602 - 0.761 - - - - 0.841 - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
39. si:ch73-334d15.1 ENSDARG00000061672 49 1.59 - - 0.772 - - 0.818 - - - si:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
40. SHF SHF 92 1.585 - 0.730 - - - 0.855 - - -
41. znhit2 ENSDARG00000030805 197 1.575 - 0.856 - - - 0.719 - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
42. si:dkey-117m1.3 si:dkey-117m1.3 154 1.575 - - - 0.849 - 0.726 - - -
43. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1.571 - 0.734 - - 0.837 - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
44. si:ch211-10m5.3 si:ch211-10m5.3 10 1.569 - - - - - 0.849 - 0.720 -
45. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 1.556 0.710 - - - - 0.846 - - - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
46. si:ch211-197h24.9 ENSDARG00000093760 168 1.548 - 0.801 - - - 0.747 - - - si:ch211-197h24.9 [Source:ZFIN;Acc:ZDB-GENE-031116-15]
47. LIN9 ENSDARG00000028475 227 1.547 0.777 0.770 - - - - - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
48. pde4cb ENSDARG00000002411 63 1.534 - 0.701 - - - - - - 0.833 phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
49. adamts9 ENSDARG00000077778 419 1.531 0.818 0.713 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
50. afap1l1a_1 ENSDARG00000089162, ENSDARG00000116849, ENSDARG00000117182 383 1.529 0.754 - - - - 0.775 - - - actin filament associated protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-050913-76]
51. CR388013.3 CR388013.3 45 1.527 - 0.753 - - - - - - 0.774
52. pigo ENSDARG00000011743 928 1.527 0.800 - - 0.727 - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
53. TTF1_2 TTF1_2 26 1.519 0.766 0.753 - - - - - - -
54. si:ch211-152l15.4 si:ch211-152l15.4 13 1.518 - - - - 0.814 - 0.704 - -
55. iqsec2 iqsec2 304 1.515 0.754 0.761 - - - - - - -
56. slc25a35 ENSDARG00000102783 129 1.514 - 0.705 - - - 0.809 - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
57. si:dkeyp-53d3.6 204 1.509 0.753 - - - - - 0.756 - - si:dkeyp-53d3.6, transcript variant X1
58. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.491 - 0.728 - - - 0.763 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
59. nck1a ENSDARG00000074262 833 1.461 - 0.716 - - - 0.745 - - - NCK adaptor protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-547]
60. rnf11a ENSDARG00000010442 592 1.435 - 0.726 - 0.709 - - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
61. mvb12ba ENSDARG00000091619 18 1 - - - - 1.000 - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
62. si:ch211-203b20.7 ENSDARG00000053036, ENSDARG00000113237 0 1 - - - - 1.000 - - - - si:ch211-203b20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-302]
63. cbln9 ENSDARG00000030254, ENSDARG00000111671 0 1 - - - - 1.000 - - - - cerebellin 9 [Source:ZFIN;Acc:ZDB-GENE-040724-34]
64. HYKK_1 HYKK_1 4 1 - - - - 1.000 - - - -
65. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 1.000 - - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
66. sox32 ENSDARG00000100591 2 1 - - - - 1.000 - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
67. SNORA16_1 SNORA16_1 1 1 - - - - 1.000 - - - -
68. TMEM132A ENSDARG00000105005 4 1 - - - - 1.000 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
69. BX323450.2 BX323450.2 2 1 - - - - 1.000 - - - -
70. BX901974.1 ENSDARG00000067592 2 1 - - - - 1.000 - - - -
71. si:ch73-289h5.4 ENSDARG00000077488 0 1 - - - - 1.000 - - - - si:ch73-289h5.4 [Source:ZFIN;Acc:ZDB-GENE-110913-10]
72. ighv8-3 ENSDARG00000114819 0 1 - - - - 1.000 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
73. CABZ01039424.1 CABZ01039424.1 15 1 - - - - 1.000 - - - -
74. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
75. CABZ01080134.1 CABZ01080134.1 2 1 - - - - 1.000 - - - -
76. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - - 1.000 - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
77. si:ch211-24n20.3 si:ch211-24n20.3 0 1 - - - - 1.000 - - - -
78. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - 1.000 - - - -
79. CMA1_7 CMA1_7 1 1 - - - - 1.000 - - - -
80. mep1a.1 ENSDARG00000029747 4 1 - - - - 1.000 - - - - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
81. si:ch73-196i15.4 si:ch73-196i15.4 0 1 - - - - 1.000 - - - -
82. GGT5 GGT5 1 1 - - - - 1.000 - - - -
83. si:dkey-109m8.1 si:dkey-109m8.1 2 1 - - - - 1.000 - - - -
84. U1_36 U1_36 0 1 - - - - 1.000 - - - -
85. U1 U1 0 1 - - - - 1.000 - - - -
86. CNTD1 2 1 - - - - 1.000 - - - - cyclin N-terminal domain containing 1
87. ATG16L2 ENSDARG00000043238, ENSDARG00000109384 0 1 - - - - 1.000 - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
88. U1_11 U1_11 0 1 - - - - 1.000 - - - -
89. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - 1.000 - - - -
90. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - 1.000 - - - -
91. si:dkey-47k20.5 ENSDARG00000115763 0 1 - - - - 1.000 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
92. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
93. BX005106.1 BX005106.1 22 1 - - - - 1.000 - - - -
94. hpse ENSDARG00000063634, ENSDARG00000112827 35 1 - - - - 1.000 - - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
95. ZBED1_4 ZBED1_4 2 1 - - - - 1.000 - - - -
96. U2_2 U2_2 2 1 - - - - 1.000 - - - -
97. tlr5a ENSDARG00000044415 3 1 - - - - 1.000 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
98. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
99. zgc:158345 2 1 - - - - 1.000 - - - - zgc:158345
100. avp ENSDARG00000058567 4 1 - - - - 1.000 - - - - arginine vasopressin [Source:ZFIN;Acc:ZDB-GENE-030407-2]

There are 1447 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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