Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-196c10.11

Gene Name Gene ID Reads Annotation
si:ch211-196c10.11 si:ch211-196c10.11 2










Genes with expression patterns similar to si:ch211-196c10.11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col17a1a ENSDARG00000069415 52 2 1.000 - - 1.000 - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
2. si:ch211-196c10.11 si:ch211-196c10.11 2 2 1.000 - - 1.000 - - - - -
3. CABZ01033130.1 CABZ01033130.1 5 1.986 1.000 - - 0.986 - - - - -
4. KBTBD3 ENSDARG00000060512 42 1.681 0.806 - - 0.875 - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
5. bnip1a ENSDARG00000078259 2 1 - - - 1.000 - - - - - BCL2 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-081107-44]
6. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
7. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
8. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
9. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
10. ATP13A5 ATP13A5 13 1 1.000 - - - - - - - -
11. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
12. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
13. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
14. angptl1 angptl1 82 1 1.000 - - - - - - - -
15. GPC6_1 GPC6_1 34 1 1.000 - - - - - - - -
16. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
17. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
18. GRID1 GRID1 51 1 1.000 - - - - - - - -
19. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
20. si:dkey-242e21.3 ENSDARG00000075723 77 1 1.000 - - - - - - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
21. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 1.000 - - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
22. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
23. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 1.000 - - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
24. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
25. PDE4B PDE4B 13 1 - - - 1.000 - - - - -
26. hoxb13a ENSDARG00000056015 174 1 - - - 1.000 - - - - - homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
27. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
28. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - 1.000 - - - - -
29. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
30. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
31. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
32. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
33. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
34. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
35. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
36. BX465205.1 ENSDARG00000097139 64 1 1.000 - - - - - - - -
37. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
38. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
39. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
40. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
41. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
42. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - 1.000 - - - - -
43. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
44. cox5aa ENSDARG00000088383 21 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
45. si:dkey-24l11.3 si:dkey-24l11.3 9 1 1.000 - - - - - - - -
46. rhcgb ENSDARG00000100265 4 1 - - - 1.000 - - - - - Rh family, C glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-040426-2595]
47. si:ch211-223a21.4 1 1 - - - 1.000 - - - - - si:ch211-223a21.4
48. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
49. DPYSL2 DPYSL2 4 1 1.000 - - - - - - - -
50. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
51. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
52. FAT1 FAT1 689 1 1.000 - - - - - - - -
53. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
54. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
55. si:ch211-226h7.5 ENSDARG00000074150 1 1 - - - 1.000 - - - - - si:ch211-226h7.5 [Source:ZFIN;Acc:ZDB-GENE-130531-3]
56. CR848763.1 CR848763.1 9 1 - - - 1.000 - - - - -
57. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
58. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
59. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
60. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
61. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
62. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
63. SCN1B SCN1B 191 1 1.000 - - - - - - - -
64. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
65. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
66. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
67. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
68. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 1.000 - - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
69. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - 1.000 - - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
70. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
71. stpg1 ENSDARG00000103765 19 1 - - - 1.000 - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
72. CU855899.1 CU855899.1 2 1 - - - 1.000 - - - - -
73. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
74. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
75. bon bon 20 1 1.000 - - - - - - - -
76. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
77. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
78. stap2b ENSDARG00000043281 174 1 - - - 1.000 - - - - - signal transducing adaptor family member 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2540]
79. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
80. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
81. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
82. hmha1 hmha1 58 1 1.000 - - - - - - - -
83. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
84. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
85. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
86. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
87. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
88. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
89. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
90. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
91. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
92. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
93. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
94. PAMR1 ENSDARG00000093480 40 1 1.000 - - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
95. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
96. snoU13 snoU13 2 1 1.000 - - - - - - - -
97. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
98. zgc:136872 ENSDARG00000008553 9 1 - - - 1.000 - - - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
99. FAM124B ENSDARG00000087489 16 0.992 - - - 0.992 - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
100. si:ch211-202n12.5 si:ch211-202n12.5 19 0.992 - - - 0.992 - - - - -

There are 174 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA