Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-190k17.31

Gene Name Gene ID Reads Annotation
si:ch211-190k17.31 si:ch211-190k17.31 29










Genes with expression patterns similar to si:ch211-190k17.31

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-190k17.31 si:ch211-190k17.31 29 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000
2. NLRP1 NLRP1 54 1.87 1.000 - - - - - 0.870 - -
3. si:dkey-249p7.4 ENSDARG00000096663 9 1.87 - 0.870 1.000 - - - - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
4. pdk3b ENSDARG00000099791 50 1.862 - 0.897 - - - - 0.965 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
5. tnr ENSDARG00000020771 20 1.849 1.000 0.849 - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
6. mir92a-1 20 1.849 1.000 0.849 - - - - - - - microRNA 92a-1
7. cx41.8 cx41.8 7 1.843 - - 0.923 0.920 - - - - -
8. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1.818 1.000 0.818 - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
9. WNK3 WNK3 36 1.818 1.000 0.818 - - - - - - -
10. btbd3b ENSDARG00000087517 107 1.818 1.000 0.818 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
11. fstl5 ENSDARG00000040198 213 1.818 1.000 0.818 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
12. BX000430.1 ENSDARG00000112057 135 1.818 1.000 0.818 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
13. si:dkey-21o19.6 si:dkey-21o19.6 18 1.818 1.000 0.818 - - - - - - -
14. zgc:114037_2 11 1.818 1.000 0.818 - - - - - - - zgc:114037
15. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1.818 - 0.818 1.000 - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
16. noxo1b ENSDARG00000056374 78 1.781 1.000 - - - - - 0.781 - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
17. pappab ENSDARG00000059858 11 1.773 - 0.818 0.955 - - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
18. gria2b ENSDARG00000052765 188 1.769 1.000 0.769 - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
19. slco4a1 ENSDARG00000075948 74 1.767 1.000 - 0.767 - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
20. si:dkeyp-107f9.4 ENSDARG00000104468 11 1.762 1.000 - - - - 0.762 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
21. si:dkey-24i24.3 ENSDARG00000088452 27 1.762 1.000 - - - - 0.762 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
22. CABZ01074946.1 CABZ01074946.1 119 1.762 1.000 - - - - 0.762 - - -
23. RP1 ENSDARG00000077687 6 1.762 1.000 - - - - 0.762 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
24. si:ch73-49p17.1 69 1.748 - 0.818 - 0.930 - - - - - si:ch73-49p17.1
25. ogfrl1 ENSDARG00000061223 64 1.733 - - 0.868 - - - 0.865 - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
26. DOC2B ENSDARG00000088293 178 1.731 0.959 - - - - - 0.772 - - double C2-like domains, beta [Source:ZFIN;Acc:ZDB-GENE-090615-1]
27. CR847906.1 ENSDARG00000099493 88 1.718 - 0.818 - - - - 0.900 - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
28. tnnc1a ENSDARG00000011400 165 1.715 - - - 0.953 - 0.762 - - - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
29. nrxn3a ENSDARG00000043746 54 1.707 0.764 - - - - 0.943 - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
30. PLEKHS1_1 PLEKHS1_1 23 1.705 - - - - - 0.762 0.943 - -
31. mir15a-1 36 1.703 1.000 0.703 - - - - - - - microRNA 15a-1
32. gpr19 ENSDARG00000102226 17 1.703 1.000 0.703 - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
33. tnni1b ENSDARG00000052708 478 1.682 - - - 0.920 - 0.762 - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
34. wbp2 ENSDARG00000056605 101 1.682 0.750 - - - - - 0.932 - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
35. lppr5b lppr5b 23 1.674 - 0.818 - 0.856 - - - - -
36. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1.636 0.818 0.818 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
37. RBBP6_8 RBBP6_8 10 1.632 - 0.870 - - - 0.762 - - -
38. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1.632 - 0.870 - - - 0.762 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
39. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1.629 - - - 0.867 - 0.762 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
40. pcp4l1 ENSDARG00000023181 117 1.602 - 0.849 - 0.753 - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
41. TMEM246 ENSDARG00000061553 168 1.601 0.767 - - - - - 0.834 - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
42. tmtc1 ENSDARG00000063149, ENSDARG00000110207 235 1.6 0.764 - - - - - 0.836 - - transmembrane and tetratricopeptide repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-219]
43. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.597 0.835 - - - - 0.762 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
44. BX530066.1 BX530066.1 42 1.595 - - - 0.833 - 0.762 - - -
45. SGSM1 SGSM1 254 1.593 0.775 0.818 - - - - - - -
46. si:dkey-58f10.9 si:dkey-58f10.9 86 1.582 - 0.822 - - - - 0.760 - -
47. si:dkey-4j21.1 17 1.58 - 0.818 - - - 0.762 - - - si:dkey-4j21.1, transcript variant X2
48. AC024175.21 AC024175.21 10 1.58 - 0.818 - - - 0.762 - - -
49. RECK ENSDARG00000090039 15 1.58 - 0.818 - - - 0.762 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
50. rab14l ENSDARG00000035188 18 1.58 - 0.818 - - - 0.762 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
51. ftr76 ENSDARG00000076093 1 1.58 - 0.818 - - - 0.762 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
52. CABZ01083834.1 CABZ01083834.1 38 1.577 - - - 0.703 - - 0.874 - -
53. si:ch211-132b12.7 ENSDARG00000068374 30 1.574 - - - 0.812 - 0.762 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
54. MAN1B1 MAN1B1 47 1.562 0.799 - - - - 0.763 - - -
55. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.561 - 0.818 - 0.743 - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
56. foxg1d ENSDARG00000070053 32 1.558 - 0.818 - 0.740 - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
57. zgc:171901 ENSDARG00000074365 129 1.55 0.811 - - - - - 0.739 - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
58. polk ENSDARG00000059963 5 1.532 - - 0.770 - - 0.762 - - - polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
59. nceh1a ENSDARG00000020427 35 1.526 0.764 - - - - 0.762 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
60. STPG2 ENSDARG00000061060 16 1.526 0.764 - - - - 0.762 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
61. thsd7ba ENSDARG00000095022 231 1.523 - 0.743 - 0.780 - - - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
62. evlb ENSDARG00000099720 245 1.518 - 0.818 - 0.700 - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
63. eif2ak2 ENSDARG00000068729 184 1.516 0.743 - - 0.773 - - - - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
64. aasdhppt ENSDARG00000037501 90 1.513 - 0.774 - - - 0.739 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:ZFIN;Acc:ZDB-GENE-050913-36]
65. CR391961.2 CR391961.2 107 1.513 0.766 - - 0.747 - - - - -
66. CU861664.1 CU861664.1 53 1.506 - - 0.744 - - 0.762 - - -
67. elfn1b ENSDARG00000074372 25 1.505 - - 0.789 0.716 - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
68. si:dkey-25i10.5 si:dkey-25i10.5 18 1.477 0.715 - - - - 0.762 - - -
69. ggcta ENSDARG00000076406 33 1.465 - 0.703 - - - 0.762 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
70. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
71. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - 1.000 - - - - - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
72. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
73. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
74. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
75. neu3.5 ENSDARG00000096368 5 1 - - 1.000 - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
76. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
77. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
78. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
79. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
80. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
81. PLD1 PLD1 158 1 1.000 - - - - - - - -
82. es1 ENSDARG00000094516 2 1 - - 1.000 - - - - - - es1 protein [Source:ZFIN;Acc:ZDB-GENE-980526-188]
83. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
84. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
85. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
86. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
87. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
88. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
89. C10H11orf63 C10H11orf63 65 1 - - 1.000 - - - - - -
90. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
91. nipbla ENSDARG00000098272 26 1 - - - - - 1.000 - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
92. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
93. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
94. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
95. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
96. crispld1a ENSDARG00000077275 7 1 1.000 - - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
97. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
98. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - 1.000 - - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
99. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
100. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5

There are 1406 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA