Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-190k17.13

Gene Name Gene ID Reads Annotation
si:ch211-190k17.13 si:ch211-190k17.13 48










Genes with expression patterns similar to si:ch211-190k17.13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-190k17.13 si:ch211-190k17.13 48 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CABZ01111953.1 ENSDARG00000099747 38 2.698 - 0.876 - - 0.862 - 0.960 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
3. crb2b ENSDARG00000060081 144 2.585 - 0.771 - - - - 0.929 - 0.885 crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
4. si:dkey-175g6.2 ENSDARG00000086665 39 2.549 - 0.876 - - 0.897 - - 0.776 - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
5. pdcb ENSDARG00000017634 10 1.953 - - - - - - 1.000 - 0.953 phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
6. si:dkey-261l7.2 ENSDARG00000094345 51 1.942 - - - - - - 1.000 - 0.942 si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
7. slc6a2 ENSDARG00000016141 49 1.919 - - - - - - 1.000 - 0.919 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
8. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.876 - 0.876 - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
9. FAM177B 9 1.876 - 0.876 - - - - 1.000 - - family with sequence similarity 177 member B
10. zp2.5 ENSDARG00000086522 15 1.876 - 0.876 - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
11. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.872 - - - 0.943 - - - - 0.929 multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
12. slc52a2 ENSDARG00000102035 57 1.842 - - - - 0.842 1.000 - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
13. gnb3b ENSDARG00000002696 46 1.829 - 0.876 - - - - - - 0.953 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
14. si:ch211-10j20.1 si:ch211-10j20.1 24 1.821 - - - - 0.867 - - - 0.954
15. lmx1a ENSDARG00000020354 111 1.813 - - - - - 1.000 - - 0.813 LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
16. dbpa ENSDARG00000063014 107 1.784 - - - - - - 1.000 - 0.784 D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
17. si:ch1073-181h11.2 ENSDARG00000103883 24 1.775 - 0.775 - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
18. nfat5 nfat5 94 1.774 - - - - - - 0.856 - 0.918
19. SGSM1_1 SGSM1_1 40 1.769 - - - 0.769 - 1.000 - - -
20. top3b ENSDARG00000027586 8 1.769 - - - 0.769 - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
21. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1.767 - 0.767 - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
22. fbxo32 ENSDARG00000040277 93 1.746 - - - - - - 1.000 0.746 - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
23. si:dkey-250k10.4 ENSDARG00000099751 2 1.735 - 0.876 - - - 0.859 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
24. CABZ01036951.1 CABZ01036951.1 71 1.731 - - - - - 0.859 0.872 - -
25. ugt2b3 46 1.73 - - - - - - 0.806 - 0.924 UDP glucuronosyltransferase 2 family, polypeptide B3
26. CR388046.3 ENSDARG00000105537 108 1.72 - - - - - - 0.856 - 0.864
27. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.716 - - - - - - 0.820 - 0.896 si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
28. vcpip1 ENSDARG00000060177 56 1.707 - 0.848 - - - 0.859 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
29. EP400 ENSDARG00000100965 45 1.704 - 0.704 - - - - 1.000 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
30. zgc:162160 ENSDARG00000060259 117 1.693 - 0.893 - - - - 0.800 - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
31. elovl4b ENSDARG00000027495 107 1.687 - - 0.840 - - - - - 0.847 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
32. si:ch211-105d18.7 si:ch211-105d18.7 6 1.683 - - - 0.769 - - 0.914 - -
33. U2 U2 52 1.683 - - - - 0.744 - 0.939 - -
34. si:ch211-284e13.5 ENSDARG00000094725 68 1.669 - - - - - - 0.783 - 0.886 si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
35. NINJ1 ENSDARG00000103663 43 1.664 - 0.876 - - - - - 0.788 - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
36. rabggta ENSDARG00000061024 332 1.662 - - - - - - 0.908 - 0.754 Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
37. spata17 ENSDARG00000054414 64 1.66 - - - - - - 0.872 0.788 - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
38. si:dkey-29n10.3 si:dkey-29n10.3 66 1.659 - 0.783 - - - 0.876 - - -
39. BX510934.1 ENSDARG00000087544 140 1.647 - 0.704 - - - - 0.943 - -
40. kctd7 ENSDARG00000061580 44 1.644 - - - - - - 0.760 - 0.884 potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
41. atp1b2b ENSDARG00000034424, ENSDARG00000113354 56 1.642 - - - - - - - 0.735 0.907 ATPase Na+/K+ transporting subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-010718-1]
42. BAI1_1 BAI1_1 57 1.633 - - - - - - - 0.766 0.867
43. P2RY1 ENSDARG00000105281 45 1.632 - - 0.772 - 0.860 - - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
44. myb ENSDARG00000053666, ENSDARG00000114024 58 1.622 - 0.783 - - 0.839 - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
45. CCSER2 CCSER2 272 1.615 - - - - - - - 0.763 0.852
46. rab11fip1a ENSDARG00000046124 69 1.614 - - - - - - 0.845 - 0.769 RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
47. GM2A ENSDARG00000088439 55 1.614 - - - 0.769 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
48. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 1.593 - 0.771 - - - - - - 0.822 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
49. CABZ01072853.1 CABZ01072853.1 35 1.571 - - - 0.725 - - - - 0.846
50. C2CD3 ENSDARG00000074137 51 1.568 - - - - 0.712 - 0.856 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
51. C2H3orf58 C2H3orf58 39 1.564 - 0.707 - - - 0.857 - - -
52. cdh13 ENSDARG00000014215 106 1.53 - 0.767 - - - 0.763 - - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
53. frzb ENSDARG00000018383 93 1.523 - 0.775 - - - - - 0.748 - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
54. CLDND1 CLDND1 155 1.523 - - - - - - - 0.719 0.804
55. mapk8b ENSDARG00000009870 295 1.521 - 0.772 - - - 0.749 - - - mitogen-activated protein kinase 8b [Source:ZFIN;Acc:ZDB-GENE-010202-1]
56. bmp6 ENSDARG00000015686 211 1.511 - - - - - - 0.794 0.717 - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
57. si:dkey-220a11.10 si:dkey-220a11.10 258 1.508 - - - - - - 0.745 0.763 -
58. TMEM221 TMEM221 62 1.503 - - - 0.747 - - - - 0.756
59. CR847511.1 CR847511.1 80 1.493 - - - - - 0.748 0.745 - -
60. pik3cg ENSDARG00000017757 157 1.476 - 0.759 0.717 - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
61. CR293532.1 ENSDARG00000115628 204 1.466 - 0.732 - - - - - 0.734 -
62. dmtn ENSDARG00000013110 791 1.452 - - - - - - 0.721 - 0.731 dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
63. desi1a ENSDARG00000033140 92 1.449 - 0.701 - - - - - 0.748 - desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
64. PMFBP1 ENSDARG00000101917 292 1.435 - - - - 0.719 - - 0.716 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
65. CABZ01034082.1 ENSDARG00000099583 2237 1.428 - - - - - - 0.712 0.716 -
66. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
67. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
68. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
69. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
70. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
71. mtus2 mtus2 22 1 - - - - - - 1.000 - -
72. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
73. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
74. MMP20 MMP20 1 1 - - - - - - 1.000 - -
75. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
76. st6galnac ENSDARG00000086292 29 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
77. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
78. PSMB11 PSMB11 3 1 - - - - - 1.000 - - -
79. mamdc2b ENSDARG00000073695 26 1 - - - - - 1.000 - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
80. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
81. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
82. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
83. si:dkey-58f10.11 ENSDARG00000094935 1 1 - - - - - - 1.000 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
84. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - - - - - 1.000 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
85. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
86. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
87. FP103005.1 ENSDARG00000099852 4 1 - - - - - 1.000 - - -
88. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - - 1.000 - -
89. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
90. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
91. si:ch211-122l24.5 si:ch211-122l24.5 1 1 - - - - - - 1.000 - -
92. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
93. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
94. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
95. CR762480.2 ENSDARG00000102728 1 1 - - - - - - 1.000 - -
96. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
97. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
98. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
99. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
100. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -

There are 1494 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA