Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-171h4.7

Gene Name Gene ID Reads Annotation
si:ch211-171h4.7 ENSDARG00000088408 168 si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]










Genes with expression patterns similar to si:ch211-171h4.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-171h4.7 ENSDARG00000088408 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
2. MAGI3 MAGI3 114 2.425 - 0.777 - - - 0.740 0.908 - -
3. paqr7a ENSDARG00000100462 15 1.924 1.000 - - - - 0.924 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
4. htra1b ENSDARG00000014907 146 1.914 1.000 - - - - 0.914 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
5. CABZ01068153.1 CABZ01068153.1 211 1.861 0.945 - - - - 0.916 - - -
6. and3 ENSDARG00000056873 22650 1.795 0.977 - - - - 0.818 - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
7. cpeb4 cpeb4 57 1.791 0.871 - - - - - 0.920 - -
8. cnstb ENSDARG00000042759 105 1.762 0.838 - - - - 0.924 - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
9. xdh ENSDARG00000055240 250 1.752 1.000 0.752 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
10. SHF SHF 92 1.734 - 0.817 - - - - 0.917 - -
11. MPPED1 ENSDARG00000088181 117 1.732 1.000 0.732 - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
12. inpp5e ENSDARG00000103926 567 1.719 0.934 - - - - 0.785 - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
13. zgc:114046 ENSDARG00000091728 68 1.719 - 0.855 - - - - 0.864 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
14. hist2h3c ENSDARG00000094154 124 1.686 0.905 - - - - 0.781 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
15. irs1 ENSDARG00000054087 1809 1.684 - - - - - 0.802 0.882 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
16. APOL4 APOL4 27 1.667 0.794 - - - - 0.873 - - -
17. AL929092.1 ENSDARG00000092217 50 1.664 0.756 - - - - - 0.908 - -
18. rad51c ENSDARG00000068919 98 1.651 - - - - 0.732 - 0.919 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
19. foxn3 ENSDARG00000012833 169 1.65 - - - - - 0.889 0.761 - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
20. gnai2b ENSDARG00000017294 686 1.649 0.750 0.899 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
21. CU367845.1 CU367845.1 215 1.645 0.756 - - - - 0.889 - - -
22. si:ch211-11n16.2 ENSDARG00000099779 417 1.639 0.826 - - - - - 0.813 - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
23. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 1.638 - - - - - 0.777 0.861 - - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
24. CR847511.1 CR847511.1 80 1.635 0.865 0.770 - - - - - - -
25. HIST1H4J HIST1H4J 31 1.634 - 0.715 - - - - 0.919 - -
26. mir184 48 1.618 - - - - - 0.725 0.893 - - microRNA 184
27. CU570684.5 CU570684.5 55 1.605 - 0.708 - - - - 0.897 - -
28. zgc:112038 ENSDARG00000046140 73 1.575 - 0.703 - - - - 0.872 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
29. gpr143 ENSDARG00000034572 559 1.574 0.770 - - - - - 0.804 - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
30. otof otof 127 1.568 0.771 0.797 - - - - - - -
31. kdm5bb ENSDARG00000003098 531 1.563 - 0.716 - - - - 0.847 - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
32. zgc:64189 ENSDARG00000033501 244 1.551 - - - - - 0.800 0.751 - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
33. wu:fd44f01 wu:fd44f01 391 1.539 0.794 - - - - - 0.745 - -
34. vcana ENSDARG00000103515 611 1.538 0.773 - - - - 0.765 - - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
35. NFATC2 NFATC2 88 1.529 0.733 - - - - - 0.796 - -
36. nudt5 ENSDARG00000078073 779 1.499 - - - - - 0.777 0.722 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
37. CR774186.2 CR774186.2 104 1.493 0.760 - - - - 0.733 - - -
38. olfml3a ENSDARG00000061852 139 1.493 0.723 0.770 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
39. MYO1C MYO1C 140 1.489 - 0.770 - - - 0.719 - - -
40. ing1 ENSDARG00000019116 394 1.48 0.723 - - - - 0.757 - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
41. TBC1D24 ENSDARG00000069339 1300 1.46 - - - - - 0.709 0.751 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
42. rgs7 rgs7 208 1.421 - - - - - 0.711 0.710 - -
43. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
44. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
45. edil3 edil3 24 1 1.000 - - - - - - - -
46. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
47. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
48. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
49. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
50. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
51. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
52. C3AR1 18 1 1.000 - - - - - - - - C3a anaphylatoxin chemotactic receptor
53. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
54. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
55. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
56. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
57. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
58. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
59. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
60. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
61. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
62. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
63. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
64. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
65. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
66. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
67. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
68. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
69. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
70. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
71. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
72. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
73. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
74. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
75. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
76. elfn2 elfn2 1 1 1.000 - - - - - - - -
77. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
78. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
79. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
80. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
81. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
82. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
83. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
84. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
85. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
86. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
87. DSEL DSEL 1 1 1.000 - - - - - - - -
88. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
89. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
90. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
91. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
92. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
93. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
94. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
95. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
96. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
97. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
98. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
99. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
100. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]

There are 1239 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA