Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-163l21.8

Gene Name Gene ID Reads Annotation
si:ch211-163l21.8 ENSDARG00000042899 724 si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]










Genes with expression patterns similar to si:ch211-163l21.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-163l21.8 ENSDARG00000042899 724 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
2. arhgef6 ENSDARG00000006683 59 1.802 - 0.950 - - - - 0.852 - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
3. DPYD DPYD 52 1.768 - 0.779 - - - - 0.989 - -
4. si:ch211-152p23.2 ENSDARG00000094519 4 1.701 0.777 - - - - - 0.924 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
5. CCDC134_1 CCDC134_1 200 1.675 - - - 0.752 - - 0.923 - -
6. zgc:110353 ENSDARG00000039443 80 1.667 0.777 - - 0.890 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
7. atp8b5b 55 1.661 0.749 - - - - - 0.912 - - ATPase, class I, type 8B, member 5b
8. vav3a ENSDARG00000086623 498 1.657 0.878 0.779 - - - - - - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
9. mb ENSDARG00000031952 351 1.652 - 0.766 - - - - 0.886 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
10. parvg ENSDARG00000067711 147 1.65 - 0.828 - 0.822 - - - - - parvin, gamma [Source:ZFIN;Acc:ZDB-GENE-070410-67]
11. CDH16 ENSDARG00000077570 78 1.645 0.790 - - - - - 0.855 - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
12. CKMT2 CKMT2 10 1.631 - 0.779 - - - - 0.852 - -
13. tbc1d16 ENSDARG00000036994 948 1.618 - 0.828 - 0.790 - - - - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
14. si:dkeyp-53d3.6 204 1.613 0.739 - - 0.874 - - - - - si:dkeyp-53d3.6, transcript variant X1
15. HAP1 HAP1 481 1.611 - - - 0.897 - - 0.714 - -
16. C20H8orf82 C20H8orf82 91 1.58 - 0.841 - - - - 0.739 - -
17. cox5b2 ENSDARG00000068738 182 1.575 0.740 - - - - - 0.835 - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
18. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.568 - 0.758 - - - - 0.810 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
19. dnajb9a ENSDARG00000052072 578 1.557 0.726 - - 0.831 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
20. si:dkey-259p7.1 si:dkey-259p7.1 59 1.556 0.777 0.779 - - - - - - -
21. kcnj1a.1 ENSDARG00000091232 110 1.542 0.732 - - - - - 0.810 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
22. CELF6 ENSDARG00000101933 228 1.534 - 0.743 - 0.791 - - - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
23. CCDC180 ENSDARG00000032372 21 1.526 - 0.779 - - - - 0.747 - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
24. GEMIN6 ENSDARG00000105394 130 1.468 - 0.720 - - - - 0.748 - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
25. CU638868.1 ENSDARG00000115797 487 1.458 0.720 - - - - - 0.738 - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
26. ccl-c5a ccl-c5a 217 1.435 0.721 - - - - - 0.714 - -
27. dfna5 dfna5 361 1 - - - - - 1.000 - - -
28. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.999 - - - - - 0.999 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
29. yipf1 ENSDARG00000014474 542 0.999 - - - - - 0.999 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
30. SLC6A16 SLC6A16 630 0.999 - - - - - 0.999 - - -
31. PRIM2 ENSDARG00000052721 825 0.999 - - - - - 0.999 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
32. zgc:112484 zgc:112484 780 0.999 - - - - - 0.999 - - -
33. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.999 - - - - - 0.999 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
34. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - 0.999 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
35. zmynd8 ENSDARG00000007601 405 0.999 - - - - - 0.999 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
36. xirp1 ENSDARG00000030722 1486 0.999 - - - - - 0.999 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
37. TRIM35_3 TRIM35_3 172 0.999 - - - - - 0.999 - - -
38. mcts1 ENSDARG00000025972 4662 0.999 - - - - - 0.999 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
39. amt ENSDARG00000010862, ENSDARG00000113280 367 0.999 - - - - - 0.999 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
40. pld2 ENSDARG00000034262 952 0.999 - - - - - 0.999 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
41. trim44 ENSDARG00000051761 509 0.999 - - - - - 0.999 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
42. sec63 ENSDARG00000017740 3789 0.999 - - - - - 0.999 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
43. hdac9b ENSDARG00000056642 1148 0.999 - - - - - 0.999 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
44. mrpl41 ENSDARG00000002264 1756 0.999 - - - - - 0.999 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
45. cyb561a3a ENSDARG00000056281 667 0.999 - - - - - 0.999 - - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
46. rbm42 ENSDARG00000039910 1111 0.999 - - - - - 0.999 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
47. clip2 ENSDARG00000059596 529 0.999 - - - - - 0.999 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
48. nog2 ENSDARG00000043066 233 0.999 - - - - - 0.999 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
49. pbxip1b ENSDARG00000011824 3726 0.999 - - - - - 0.999 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
50. CASKIN2_1 CASKIN2_1 2299 0.999 - - - - - 0.999 - - -
51. eva1a ENSDARG00000061405 896 0.999 - - - - - 0.999 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
52. tdrd3 ENSDARG00000025421 633 0.999 - - - - - 0.999 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
53. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.999 - - - - - 0.999 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
54. pes ENSDARG00000018902 3286 0.999 - - - - - 0.999 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
55. klhl41a ENSDARG00000068888 1034 0.999 - - - - - 0.999 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
56. vac14 ENSDARG00000014303 941 0.999 - - - - - 0.999 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
57. C9H2orf76 C9H2orf76 559 0.999 - - - - - 0.999 - - -
58. pank2 ENSDARG00000003311 881 0.999 - - - - - 0.999 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
59. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.999 - - - - - 0.999 - - -
60. rc3h1 rc3h1 1087 0.998 - - - - - 0.998 - - -
61. CREM CREM 1333 0.998 - - - - - 0.998 - - -
62. mst4 mst4 1672 0.998 - - - - - 0.998 - - -
63. lap3 ENSDARG00000061981 1188 0.998 - - - - - 0.998 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
64. zfyve21 ENSDARG00000027887 1687 0.998 - - - - - 0.998 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
65. FAR2 FAR2 1459 0.998 - - - - - 0.998 - - -
66. sf3b4 ENSDARG00000018574 7470 0.998 - - - - - 0.998 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
67. si:dkey-3d4.3 ENSDARG00000074079 365 0.998 - - - - - 0.998 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
68. uggt1 ENSDARG00000054746 2060 0.998 - - - - - 0.998 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
69. pgm2 ENSDARG00000018178 985 0.998 - - - - - 0.998 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
70. BRCC3 ENSDARG00000098242 1123 0.998 - - - - - 0.998 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
71. FP102157.1 FP102157.1 1096 0.998 - - - - - 0.998 - - -
72. triqk ENSDARG00000076296 1274 0.998 - - - - - 0.998 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
73. yes1 ENSDARG00000005941 3577 0.998 - - - - - 0.998 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
74. GPR108 ENSDARG00000096651 1734 0.997 - - - - - 0.997 - - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
75. VPS37C ENSDARG00000031836 906 0.997 - - - - - 0.997 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
76. PROSER1 ENSDARG00000086302 1935 0.997 - - - - - 0.997 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
77. tnni2b.2 ENSDARG00000029995 935 0.997 - - - - - 0.997 - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
78. parn ENSDARG00000102634 2049 0.997 - - - - - 0.997 - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
79. canx ENSDARG00000037488 4328 0.997 - - - - - 0.997 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
80. sh3yl1 ENSDARG00000074393 815 0.997 - - - - - 0.997 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
81. tmem134 ENSDARG00000024828 3241 0.997 - - - - - 0.997 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
82. tcf7l1a ENSDARG00000038159 2288 0.997 - - - - - 0.997 - - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
83. SMARCA1 ENSDARG00000012776 673 0.996 - - - - - 0.996 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
84. imp4 ENSDARG00000054540 1396 0.996 - - - - - 0.996 - - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
85. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.996 - - - - - 0.996 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
86. creg2 ENSDARG00000000666 643 0.996 - - - - - 0.996 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
87. itpkb ENSDARG00000010059 2352 0.996 - - - - - 0.996 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
88. PLEKHG4 ENSDARG00000075964 2860 0.996 - - - - - 0.996 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
89. ndufv2 ENSDARG00000013044 3758 0.996 - - - - - 0.996 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
90. ppp2r2a ppp2r2a 5785 0.996 - - - - - 0.996 - - -
91. ociad1 ENSDARG00000052334 2797 0.996 - - - - - 0.996 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
92. flot2b ENSDARG00000069774 2831 0.996 - - - - - 0.996 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
93. rabgef1 ENSDARG00000014430 1176 0.995 - - - - - 0.995 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
94. ptp4a2 ptp4a2 3196 0.995 - - - - - 0.995 - - -
95. mpi ENSDARG00000030786 3052 0.995 - - - - - 0.995 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
96. stxbp3 ENSDARG00000008142 2604 0.995 - - - - - 0.995 - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
97. parp1 ENSDARG00000019529 6787 0.995 - - - - - 0.995 - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
98. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 0.995 - - - - - 0.995 - - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
99. parvaa ENSDARG00000043710 3495 0.995 - - - - - 0.995 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
100. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 0.995 - - - - - 0.995 - - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA