Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-163f10.4

Gene Name Gene ID Reads Annotation
si:ch211-163f10.4 si:ch211-163f10.4 1










Genes with expression patterns similar to si:ch211-163f10.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-163f10.4 si:ch211-163f10.4 1 2 - - - - - - 1.000 - 1.000
2. U4atac U4atac 47 1 - - - - - - 1.000 - -
3. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
4. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
5. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
6. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
7. spo11 ENSDARG00000013837 7 1 - - - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
8. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
9. tcp10 tcp10 1 1 - - - - - - - - 1.000
10. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
11. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
12. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
13. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
14. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
15. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
16. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
17. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
18. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
19. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
20. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
21. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
22. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
23. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
24. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
25. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
26. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
27. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
28. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - - 1.000 - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
29. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
30. DGKA DGKA 8 1 - - - - - - - - 1.000
31. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
32. wdr4 ENSDARG00000090581 42 1 - - - - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
33. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - - - - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
34. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
35. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
36. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
37. sim1b ENSDARG00000013789 47 1 - - - - - - 1.000 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
38. il1b ENSDARG00000098700 27 1 - - - - - - 1.000 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
39. acta2 ENSDARG00000045180 96 1 - - - - - - 1.000 - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
40. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
41. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
42. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
43. BX537350.1 BX537350.1 8 1 - - - - - - - - 1.000
44. b3galtlb b3galtlb 27 1 - - - - - - 1.000 - -
45. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
46. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
47. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - - - - - 1.000
48. foxi1 ENSDARG00000104566 176 1 - - - - - - 1.000 - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
49. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
50. wbp4 ENSDARG00000068082 1 1 - - - - - - - - 1.000 WW domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-342]
51. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
52. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
53. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
54. socs7_1 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 1 1 - - - - - - - - 1.000 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
55. si:ch211-207c6.14 si:ch211-207c6.14 19 1 - - - - - - - - 1.000
56. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
57. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
58. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
59. glsa ENSDARG00000062812 1 1 - - - - - - - - 1.000 glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
60. ifit5 ifit5 12 1 - - - - - - 1.000 - -
61. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
62. CST7 CST7 22 1 - - - - - - - - 1.000
63. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
64. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
65. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
66. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
67. POLR2E POLR2E 1 1 - - - - - - - - 1.000
68. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
69. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
70. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
71. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
72. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -
73. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
74. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
75. cda 3 1 - - - - - - - - 1.000 cytidine deaminase
76. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
77. GALNT8_1 GALNT8_1 10 1 - - - - - - 1.000 - -
78. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
79. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
80. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
81. RAPGEF4 ENSDARG00000079872 82 1 - - - - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
82. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
83. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
84. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
85. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
86. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
87. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
88. si:ch211-146g19.1 si:ch211-146g19.1 1 1 - - - - - - - - 1.000
89. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
90. GTF3A GTF3A 6 1 - - - - - - - - 1.000
91. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
92. NPFFR1 ENSDARG00000111997 29 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
93. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
94. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - - 1.000
95. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - - 1.000
96. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
97. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
98. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
99. psmd2 ENSDARG00000103190 141 1 - - - - - - 1.000 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
100. FAM13C FAM13C 1 1 - - - - - - - - 1.000

There are 171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA