Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-161n3.5

Gene Name Gene ID Reads Annotation
si:ch211-161n3.5 ENSDARG00000095981 1 si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]










Genes with expression patterns similar to si:ch211-161n3.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-161n3.5 ENSDARG00000095981 1 3 - - - - - 1.000 - 1.000 1.000 si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
2. si:ch211-119d14.3 ENSDARG00000075332 12 2 - - - - - 1.000 - - 1.000 si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
3. cep89 ENSDARG00000005092 4 1.744 - - - - - - - 1.000 0.744 centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
4. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.571 - - - - - 0.804 - - 0.767 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
5. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
6. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
7. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
8. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
9. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
10. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
11. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
12. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
13. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
14. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
15. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
16. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
17. CABZ01046996.1 ENSDARG00000111833 1 1 - - - - - - - - 1.000
18. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
19. si:ch73-296e2.3 ENSDARG00000079769 0 1 - - - - - - - - 1.000 si:ch73-296e2.3 [Source:ZFIN;Acc:ZDB-GENE-100922-156]
20. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
21. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
22. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
23. XPO5 ENSDARG00000098868 3 1 - - - - - - - - 1.000 exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
24. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
25. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
26. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - 1.000 - - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
27. M1AP ENSDARG00000099485 1 1 - - - - - - - - 1.000 meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
28. GABRA3 ENSDARG00000090883 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
29. galr1 galr1 9 1 - - - - - - - - 1.000
30. BPHL ENSDARG00000102877 28 1 - - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
31. clcn2 clcn2 13 1 - - - - - 1.000 - - -
32. si:dkey-45h7.1 ENSDARG00000093618 1 1 - - - - - - - - 1.000 si:dkey-45h7.1 [Source:ZFIN;Acc:ZDB-GENE-050420-369]
33. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
34. BX323448.1 ENSDARG00000116236 10 1 - - - - - - - - 1.000
35. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
36. FP102169.1 ENSDARG00000110967 1 1 - - - - - - - - 1.000 secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
37. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
38. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
39. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 1 - - - - - - - - 1.000 si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
40. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
41. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - - - - 1.000
42. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
43. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
44. si:ch211-288g17.4 ENSDARG00000070960 0 1 - - - - - - - - 1.000 si:ch211-288g17.4 [Source:ZFIN;Acc:ZDB-GENE-060531-62]
45. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
46. KIF25 ENSDARG00000017532 1 1 - - - - - - - - 1.000 kinesin family member 25 [Source:ZFIN;Acc:ZDB-GENE-041001-167]
47. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
48. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
49. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
50. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
51. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
52. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
53. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
54. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
55. hs3st2 ENSDARG00000059616 2 1 - - - - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
56. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
57. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
58. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
59. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
60. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
61. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
62. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -
63. UBXN11 ENSDARG00000053828 22 1 - - - - - 1.000 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
64. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
65. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
66. cobl ENSDARG00000091006 4 1 - - - - - - - - 1.000 cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
67. cnnm1 1 1 - - - - - - - - 1.000 cyclin and CBS domain divalent metal cation transport mediator 1, transcript variant X3
68. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
69. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - 1.000 - - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
70. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
71. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
72. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
73. lonrf1 ENSDARG00000075048 13 1 - - - - - 1.000 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
74. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
75. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
76. CU570981.1 CU570981.1 9 1 - - - - - 1.000 - - -
77. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
78. opn1lw1 ENSDARG00000044862, ENSDARG00000115464 0 1 - - - - - - - - 1.000 opsin 1 (cone pigments), long-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-41]
79. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - - - - - 1.000
80. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - - - - 1.000 si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
81. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
82. CR524823.2 CR524823.2 0 1 - - - - - - - - 1.000
83. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
84. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
85. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
86. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
87. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
88. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
89. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - - - - 1.000
90. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
91. si:ch211-213i16.3 2 1 - - - - - - - - 1.000 si:ch211-213i16.3, transcript variant X1
92. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
93. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - - - - 1.000 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
94. psmb11 psmb11 5 1 - - - - - - - 1.000 -
95. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
96. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - - - - - - - 1.000
97. abcd1 ENSDARG00000074876 6 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
98. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
99. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
100. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]

There are 342 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA