Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-161m3.4

Gene Name Gene ID Reads Annotation
si:ch211-161m3.4 ENSDARG00000103375 10 si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]










Genes with expression patterns similar to si:ch211-161m3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-161m3.4 ENSDARG00000103375 10 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
2. CR855327.1 CR855327.1 6 2.921 - 0.921 - - - 1.000 1.000 - -
3. usp46 ENSDARG00000045343 65 2.637 - 0.865 - - - 1.000 0.772 - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
4. klc4_1 ENSDARG00000086985 22 2 - 1.000 - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
5. FAM188B2 4 2 - - - - 1.000 1.000 - - - family with sequence similarity 188, member B2
6. cacna1aa ENSDARG00000037905 4 2 - 1.000 - - 1.000 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
7. VASH1 ENSDARG00000092716 33 2 - - - - 1.000 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
8. VSIG10L ENSDARG00000089237 12 2 - - - - 1.000 - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
9. ppm1na ENSDARG00000010231 3 2 - - - - - 1.000 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
10. BX324198.1 BX324198.1 12 2 - - - - 1.000 - 1.000 - -
11. ZCCHC6 2 2 - 1.000 - - 1.000 - - - - zinc finger, CCHC domain containing 6
12. si:ch211-131e11.14 si:ch211-131e11.14 7 2 - - - - - 1.000 1.000 - -
13. si:ch211-62a1.1 si:ch211-62a1.1 6 2 - 1.000 - - - 1.000 - - -
14. mir30b 4 2 - - - - 1.000 - 1.000 - - microRNA 30b
15. efhb ENSDARG00000069703 9 2 - 1.000 - - - - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
16. si:dkey-102m7.3 ENSDARG00000100366 27 2 - 1.000 - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
17. abcc13 ENSDARG00000062519 2 2 - 1.000 - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
18. si:dkey-22i16.9 ENSDARG00000095949 16 2 - 1.000 - - - 1.000 - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
19. sstr3 ENSDARG00000014477 14 2 - 1.000 - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
20. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.956 - - - - - 1.000 0.956 - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
21. crispld1a ENSDARG00000077275 7 1.916 - - - - 1.000 - 0.916 - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
22. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1.907 - 1.000 - 0.907 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
23. ciz1b ENSDARG00000089461 57 1.9 - 0.921 - - - 0.979 - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
24. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1.895 - - 0.895 - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
25. guca1a ENSDARG00000010454 9 1.887 - - 0.887 - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
26. zgc:172120 ENSDARG00000069199 278 1.881 - 1.000 - - - - 0.881 - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
27. ENDOD1_4 ENDOD1_4 2 1.865 - - - - - - 0.865 1.000 -
28. CR854948.2 CR854948.2 4 1.859 - - - - 0.908 - 0.951 - -
29. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.847 - - 0.847 - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
30. FNDC7_2 FNDC7_2 18 1.834 - - - - 1.000 0.834 - - -
31. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
32. cnr1 ENSDARG00000009020 33 1.813 - - - - - 1.000 0.813 - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
33. si:dkey-4p15.5 ENSDARG00000086272 7 1.808 - - - - - - 1.000 0.808 - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
34. socs1a ENSDARG00000038095 20 1.798 - - - - 1.000 0.798 - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
35. sumo2a ENSDARG00000104390 4 1.797 - - - - 0.797 - 1.000 - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
36. CCDC87 ENSDARG00000045683 27 1.775 - - - - - 0.853 0.922 - - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
37. TTC18 TTC18 58 1.764 - - - 0.883 - - 0.881 - -
38. C6H21orf58 C6H21orf58 14 1.75 - - - 0.834 - - 0.916 - -
39. si:dkey-14a7.4 si:dkey-14a7.4 5 1.748 - - - - 1.000 - 0.748 - -
40. wisp2 ENSDARG00000077882 3 1.746 - - - - 1.000 - - 0.746 - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
41. CT027705.3 CT027705.3 9 1.746 - - - - 1.000 - - 0.746 -
42. ZDHHC12 ZDHHC12 29 1.728 - 1.000 - - - - 0.728 - -
43. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 1.725 - - - - - 0.844 0.881 - - ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
44. c1ql3a ENSDARG00000010350 179 1.724 - 0.957 - - - - 0.767 - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
45. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1.714 - 1.000 - - - - 0.714 - -
46. skor1a ENSDARG00000069030 19 1.712 - 1.000 - - - - - 0.712 - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
47. cabp5a ENSDARG00000002576 14 1.703 - 0.703 - - - - 1.000 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
48. bora ENSDARG00000042688, ENSDARG00000112916 402 1.69 - 0.925 - - - - 0.765 - - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
49. TMPRSS5 ENSDARG00000087717 54 1.686 - - - 0.825 - 0.861 - - - transmembrane serine protease 5 [Source:ZFIN;Acc:ZDB-GENE-131121-184]
50. bcl11aa ENSDARG00000061352 61 1.685 - 0.921 - - - - 0.764 - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
51. NF1 NF1 62 1.683 - 0.847 - 0.836 - - - - -
52. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.675 - 0.719 - - - - 0.956 - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
53. mb21d2b mb21d2b 84 1.634 - - - - - 0.753 0.881 - -
54. dlg4 88 1.606 - 0.852 - - - 0.754 - - - discs large MAGUK scaffold protein 4, transcript variant X5
55. ptprz1b ENSDARG00000020871 435 1.599 - 0.779 - - - 0.820 - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
56. adat1 ENSDARG00000061348 62 1.598 - 0.717 - - - - 0.881 - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
57. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.588 - - - - - 0.754 0.834 - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
58. bcan ENSDARG00000099412 18 1.579 - - - - - 0.844 - 0.735 - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
59. tnk2a ENSDARG00000090646 133 1.577 - - - - - 0.714 0.863 - - tyrosine kinase, non-receptor, 2a [Source:ZFIN;Acc:ZDB-GENE-091118-85]
60. NACC2 160 1.56 - 0.812 - - - 0.748 - - - NACC family member 2
61. nsmfa ENSDARG00000060025 70 1.548 - 0.730 - - - - 0.818 - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
62. si:ch211-258f1.3 ENSDARG00000105119 23 1.537 - - - 0.722 - - 0.815 - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
63. ZNFX1 ENSDARG00000100280 118 1.533 - 0.712 - - - - 0.821 - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
64. ZNF70_8 ZNF70_8 2 1.516 - - 0.770 - - - - 0.746 -
65. RP1L1_1 RP1L1_1 11 1.509 - - 0.763 - - - - 0.746 -
66. U3_1 U3_1 61 1.492 - - - 0.773 - 0.719 - - -
67. SLC46A2 ENSDARG00000075229 78 1.491 - 0.716 0.775 - - - - - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
68. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
69. si:dkey-11f4.7 ENSDARG00000099207 1 1 - - - - 1.000 - - - - si:dkey-11f4.7 [Source:ZFIN;Acc:ZDB-GENE-070912-361]
70. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
71. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
72. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - 1.000 - -
73. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - 1.000 - - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
74. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
75. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
76. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
77. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - 1.000 - - - - ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
78. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
79. rhcga ENSDARG00000003203 7 1 - - - - 1.000 - - - - Rh family, C glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-070424-81]
80. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
81. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
82. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
83. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
84. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
85. slc34a1b ENSDARG00000054658 1 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
86. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
87. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
88. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
89. U1_21 U1_21 0 1 - - - - 1.000 - - - -
90. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - - 1.000 - - - -
91. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
92. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
93. zgc:172014 ENSDARG00000101775 3 1 - - - - - - 1.000 - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
94. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
95. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
96. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
97. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
98. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
99. U6_27 U6_27 1 1 - - - - - - 1.000 - -
100. SMC1B ENSDARG00000014402 0 1 - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]

There are 1225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA