Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-160d14.9

Gene Name Gene ID Reads Annotation
si:ch211-160d14.9 8 si:ch211-160d14.9, transcript variant X1










Genes with expression patterns similar to si:ch211-160d14.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-160d14.9 8 5 1.000 - - - 1.000 - 1.000 1.000 1.000 si:ch211-160d14.9, transcript variant X1
2. SOX8 SOX8 22 2 1.000 - - - - - 1.000 - -
3. 5S_rRNA_10 5S_rRNA_10 2 2 1.000 - - - - - 1.000 - -
4. F2RL3 ENSDARG00000079399 29 2 1.000 - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
5. ttc22 ENSDARG00000077836 21 1.997 1.000 - - - 0.997 - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
6. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.982 - - - - 0.982 - - - 1.000
7. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.966 1.000 - - - - - 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
8. dyx1c1 dyx1c1 36 1.927 - - - - - - 0.927 - 1.000
9. ano2 ENSDARG00000101363 50 1.923 1.000 - - - 0.923 - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
10. CABZ01069081.1 CABZ01069081.1 16 1.906 1.000 - - - - - 0.906 - -
11. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1.887 1.000 - - - 0.887 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
12. cacnb2a ENSDARG00000099045 374 1.881 1.000 - - - - - 0.881 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
13. FP565458.1 FP565458.1 61 1.843 1.000 - - - 0.843 - - - -
14. CABZ01081748.1 ENSDARG00000102139 31 1.83 - - - - 0.996 - 0.834 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
15. zgc:174700_1 zgc:174700_1 60 1.828 1.000 - - - 0.828 - - - -
16. vipr1b ENSDARG00000059058 62 1.809 1.000 - - - - - 0.809 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
17. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - - - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
18. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1.789 1.000 - - - 0.789 - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
19. ubxn10 ENSDARG00000052535 24 1.766 1.000 - - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
20. ARHGAP17 ARHGAP17 29 1.764 1.000 - - - - - 0.764 - -
21. si:dkey-217m5.3 si:dkey-217m5.3 22 1.748 1.000 - - - - - 0.748 - -
22. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.737 1.000 - - - 0.737 - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
23. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.733 1.000 - - - - - - - 0.733 NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
24. si:ch211-196n4.5 si:ch211-196n4.5 63 1.714 0.881 - - - - - 0.833 - -
25. CPNE7 ENSDARG00000102584 95 1.605 0.746 - - - - - 0.859 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
26. si:ch211-207c7.6 si:ch211-207c7.6 23 1.605 0.731 - - - - - 0.874 - -
27. chico ENSDARG00000019588 77 1.551 0.746 - - - 0.805 - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
28. CR387997.1 CR387997.1 190 1.511 - - - - 0.797 - 0.714 - -
29. slco5a1 slco5a1 383 1.452 0.717 - - - - - 0.735 - -
30. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
31. inpp5jb ENSDARG00000093359 4 1 - - - - - - - - 1.000 inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
32. CU062632.1 ENSDARG00000117236 0 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
33. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
34. pdk2 pdk2 32 1 - - - - - - 1.000 - -
35. si:ch73-381f5.2 ENSDARG00000092723 1 1 1.000 - - - - - - - - si:ch73-381f5.2 [Source:ZFIN;Acc:ZDB-GENE-090311-25]
36. SNORD18_2 SNORD18_2 7 1 - - - - - - 1.000 - -
37. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - - - - 1.000 zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
38. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
39. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1 1.000 - - - - - - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
40. ciita ENSDARG00000090851 5 1 1.000 - - - - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
41. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
42. ifit2 ifit2 11 1 1.000 - - - - - - - -
43. btr29 ENSDARG00000099138 5 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
44. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
45. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - - 1.000 si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
46. slc6a19b ENSDARG00000056719 140 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
47. ripply3 ENSDARG00000036974 30 1 - - - - - - 1.000 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
48. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - - - 1.000 - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
49. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
50. BX088525.2 ENSDARG00000117222 11 1 1.000 - - - - - - - -
51. fermt3a fermt3a 56 1 1.000 - - - - - - - -
52. cabp5a ENSDARG00000002576 14 1 - - - - - - 1.000 - - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
53. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]
54. plxnd1 ENSDARG00000086057 2 1 - - - - - - - - 1.000 plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
55. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
56. efhb ENSDARG00000069703 9 1 - - - - - - 1.000 - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
57. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 1.000 - - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
58. si:ch211-30g3.4 si:ch211-30g3.4 3 1 - - - - - - - - 1.000
59. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
60. epb41l3b ENSDARG00000019917 9 1 1.000 - - - - - - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
61. PHF1 ENSDARG00000057439 1 1 - - - - - - - - 1.000 PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
62. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
63. C6H3orf18 C6H3orf18 7 1 - - - - - - - - 1.000
64. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - - - - - 1.000 carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
65. BX649385.3 BX649385.3 1 1 - - - - - - - - 1.000
66. BX119910.2 BX119910.2 2 1 - - - - - - - - 1.000
67. fam207a ENSDARG00000071500 106 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
68. slc1a2a ENSDARG00000052138 5 1 1.000 - - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-100422-11]
69. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
70. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - - - - - 1.000
71. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
72. CNTD1 2 1 1.000 - - - - - - - - cyclin N-terminal domain containing 1
73. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
74. abhd10a ENSDARG00000076435 3 1 1.000 - - - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
75. klf6b ENSDARG00000038561 27 1 1.000 - - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
76. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
77. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - - - - - - - 1.000 calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
78. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
79. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
80. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
81. zgc:154055 ENSDARG00000103924 452 1 1.000 - - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
82. muc13b ENSDARG00000079647 67 1 1.000 - - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
83. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
84. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - - - 1.000
85. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
86. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - - - - 1.000 - -
87. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
88. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
89. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
90. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
91. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
92. hesx1 ENSDARG00000060734 2 1 - - - - - - - - 1.000 HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
93. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
94. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
95. C17H8orf74 C17H8orf74 4 1 - - - - - - 1.000 - -
96. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - - - - 1.000 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
97. brpf3 brpf3 15 1 1.000 - - - - - - - -
98. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
99. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
100. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA