Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-155o21.3

Gene Name Gene ID Reads Annotation
si:ch211-155o21.3 ENSDARG00000086518 301 si:ch211-155o21.3 [Source:ZFIN;Acc:ZDB-GENE-121214-24]










Genes with expression patterns similar to si:ch211-155o21.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-155o21.3 ENSDARG00000086518 301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-155o21.3 [Source:ZFIN;Acc:ZDB-GENE-121214-24]
2. C17H14orf159 128 1.542 - - - - 0.762 0.780 - - - c17h14orf159 homolog (H. sapiens)
3. fbxw9 ENSDARG00000058020 28 1.516 - - - - 0.806 0.710 - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
4. slc6a14 ENSDARG00000029866 61 1.486 - 0.776 - - - 0.710 - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
5. polr2b ENSDARG00000098783 90 1.452 - - - - - 0.710 0.742 - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
6. BX005380.2 ENSDARG00000110454 243 1.417 - - - - 0.701 - 0.716 - -
7. otud3 ENSDARG00000022648 263 1.414 - - - - 0.710 0.704 - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
8. lpcat4 ENSDARG00000035028 167 0.914 - - - - - - 0.914 - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
9. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.903 - 0.903 - - - - - - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
10. arhgef9a ENSDARG00000061746 58 0.891 - - - - - 0.891 - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
11. RBM22 ENSDARG00000010238 493 0.884 - - - - - 0.884 - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
12. faxdc2 ENSDARG00000023820 260 0.881 - 0.881 - - - - - - - fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
13. gpsm1b ENSDARG00000054874 1308 0.875 - 0.875 - - - - - - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
14. phip ENSDARG00000015970 1080 0.87 - - - - - - 0.870 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
15. U1_25 U1_25 283 0.857 - - - - - 0.857 - - -
16. CU183952.1 CU183952.1 32 0.857 - - - - - 0.857 - - -
17. FP245465.3 FP245465.3 5 0.857 - - - - - 0.857 - - -
18. si:ch211-106h11.1 ENSDARG00000017720 1 0.857 - - - - - 0.857 - - - si:ch211-106h11.1 [Source:ZFIN;Acc:ZDB-GENE-061009-2]
19. TMEM221 TMEM221 62 0.854 - - - - - 0.854 - - -
20. pdxkb ENSDARG00000036546 721 0.851 - - - - - - 0.851 - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
21. bmp1b ENSDARG00000028053 25 0.851 - - - - 0.851 - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
22. CABZ01025393.1 CABZ01025393.1 37 0.85 - - - - - 0.850 - - -
23. zgc:114041 ENSDARG00000052109 76 0.849 - - - - - 0.849 - - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
24. slc25a38b ENSDARG00000074533 354 0.844 - 0.844 - - - - - - - solute carrier family 25, member 38b [Source:ZFIN;Acc:ZDB-GENE-110214-1]
25. MICAL2 MICAL2 396 0.842 - 0.842 - - - - - - -
26. NFATC2 NFATC2 88 0.838 - - - - 0.838 - - - -
27. RFFL ENSDARG00000042833 73 0.837 - 0.837 - - - - - - - ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
28. AIFM2 ENSDARG00000077549 1419 0.835 - - - - - - 0.835 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
29. CABZ01061717.1 CABZ01061717.1 320 0.83 - - - - 0.830 - - - -
30. mplkip ENSDARG00000078986 1316 0.83 - 0.830 - - - - - - - M-phase specific PLK1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-070912-182]
31. cdr2l ENSDARG00000026834 254 0.829 - - - - 0.829 - - - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
32. zgc:173990 zgc:173990 161 0.827 - - - - - 0.827 - - -
33. lrrc9 ENSDARG00000054352 25 0.827 - - - - - 0.827 - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
34. zgc:153911 ENSDARG00000002509 110 0.826 - - - - 0.826 - - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
35. si:ch211-22k7.1 si:ch211-22k7.1 30 0.825 - 0.825 - - - - - - -
36. RBBP6_2 RBBP6_2 23 0.824 - - - - 0.824 - - - -
37. BX569789.2 BX569789.2 12 0.824 - - - - 0.824 - - - -
38. BX572619.1 ENSDARG00000089303 78 0.824 - - - - 0.824 - - - - wu:fa25f02 [Source:NCBI gene;Acc:562425]
39. mrpl3 ENSDARG00000103318 2308 0.823 - - - - - - 0.823 - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
40. oc90 ENSDARG00000001721, ENSDARG00000111394 553 0.823 - - - - - 0.823 - - - otoconin 90 [Source:ZFIN;Acc:ZDB-GENE-070912-300]
41. eef1a1b ENSDARG00000069951 35 0.823 - - - - 0.823 - - - - eukaryotic translation elongation factor 1 alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050417-327]
42. si:dkey-197d18.2 si:dkey-197d18.2 10 0.823 - - - - 0.823 - - - -
43. TRIM14_13 TRIM14_13 18 0.822 - - - - 0.822 - - - -
44. mapk7 ENSDARG00000023110 455 0.822 - - - - - - 0.822 - - mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
45. tbcela ENSDARG00000002682 1179 0.822 - 0.822 - - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
46. ARHGEF40 ENSDARG00000078979 25 0.821 - - - - 0.821 - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
47. grin2cb ENSDARG00000077560 9 0.821 - - - - 0.821 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
48. arl11l arl11l 31 0.821 - - - - 0.821 - - - -
49. CABZ01068274.1 CABZ01068274.1 193 0.821 - - - - 0.821 - - - -
50. si:ch211-198k9.10 si:ch211-198k9.10 47 0.82 - - - - 0.820 - - - -
51. si:ch1073-396h14.1 ENSDARG00000057590 503 0.82 - - - - - - 0.820 - - si:ch1073-396h14.1 [Source:ZFIN;Acc:ZDB-GENE-070705-6]
52. nub1 ENSDARG00000061417 33 0.819 - - - - 0.819 - - - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
53. si:ch211-281g2.4 si:ch211-281g2.4 121 0.819 - - - - 0.819 - - - -
54. TMCC1 TMCC1 463 0.817 - - - - - - 0.817 - -
55. HBQ1 HBQ1 413 0.816 - 0.816 - - - - - - -
56. slc27a6 ENSDARG00000046053 57 0.816 - - - - 0.816 - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
57. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.815 - - - - 0.815 - - - -
58. ptn ENSDARG00000102340 229 0.814 - - - - - 0.814 - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
59. kctd16b ENSDARG00000020102 83 0.814 - - - - - 0.814 - - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
60. imp4 ENSDARG00000054540 1396 0.813 - - - - - - 0.813 - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
61. taok2b_1 ENSDARG00000100620 2082 0.813 - - - - - - 0.813 - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
62. hace1 ENSDARG00000062280 556 0.812 - - - - - - 0.812 - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
63. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 0.81 - 0.810 - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
64. kctd15a ENSDARG00000045893 1272 0.809 - - - - - - 0.809 - - potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
65. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.809 - - - - 0.809 - - - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
66. kif16ba ENSDARG00000100225 114 0.808 - - - - - 0.808 - - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
67. GEMIN6 ENSDARG00000105394 130 0.806 - 0.806 - - - - - - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
68. vac14 ENSDARG00000014303 941 0.805 - - - - 0.805 - - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
69. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.805 - - - - 0.805 - - - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
70. psmd4b ENSDARG00000023279 2002 0.805 - - - - - - 0.805 - - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
71. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.804 - - - - 0.804 - - - -
72. cwf19l2 ENSDARG00000091760 1372 0.804 - - - - - - 0.804 - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
73. zbtb8b ENSDARG00000035889 680 0.803 0.803 - - - - - - - - zinc finger and BTB domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-050417-42]
74. ppp1r14aa ENSDARG00000011239 980 0.803 - - - - - - 0.803 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
75. si:ch211-214p16.2 ENSDARG00000094975 59 0.802 - 0.802 - - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
76. zgc:77056 ENSDARG00000029615 297 0.8 - - - - - - 0.800 - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
77. CPXM1 CPXM1 201 0.8 - 0.800 - - - - - - -
78. si:dkey-222f2.3 si:dkey-222f2.3 8 0.8 - - - - - 0.800 - - -
79. si:ch73-191k20.3 ENSDARG00000094206 104 0.8 - 0.800 - - - - - - - si:ch73-191k20.3 [Source:ZFIN;Acc:ZDB-GENE-090312-62]
80. eral1 ENSDARG00000059887 149 0.8 - - - - 0.800 - - - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
81. kiaa0947l kiaa0947l 61 0.798 - - - - 0.798 - - - -
82. GPATCH3 ENSDARG00000052747 394 0.798 - 0.798 - - - - - - - G patch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070112-902]
83. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 0.798 - - - - - 0.798 - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
84. slc25a43 ENSDARG00000102048 489 0.797 - 0.797 - - - - - - - solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
85. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 0.797 - - - - - - 0.797 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
86. ppp1r37 ENSDARG00000078458 49 0.794 - - - - 0.794 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
87. nlgn1 ENSDARG00000077710 72 0.793 - - - - 0.793 - - - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
88. RAB38 122 0.793 - 0.793 - - - - - - - RAB38, member RAS oncogene family
89. notch1a ENSDARG00000103554 498 0.793 - 0.793 - - - - - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
90. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.793 0.793 - - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
91. d2hgdh ENSDARG00000060210 362 0.793 - 0.793 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
92. sh3gl1b ENSDARG00000002642, ENSDARG00000113208 61 0.793 - 0.793 - - - - - - - SH3-domain GRB2-like 1b [Source:ZFIN;Acc:ZDB-GENE-031001-6]
93. si:dkey-191g9.5 ENSDARG00000056080 60 0.791 - - - - 0.791 - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
94. agpat9 agpat9 938 0.79 - - - - - 0.790 - - -
95. GAB2 ENSDARG00000105120 147 0.79 - - - - 0.790 - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
96. hs3st1 82 0.789 - - - - - 0.789 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1, transcript variant X1
97. thoc5 ENSDARG00000038290 1489 0.789 - 0.789 - - - - - - - THO complex 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3789]
98. rcor1 ENSDARG00000031434 2733 0.788 - - - - - - 0.788 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
99. chka ENSDARG00000041078, ENSDARG00000115973 468 0.787 - - - - 0.787 - - - - choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
100. ABHD12B_1 ABHD12B_1 57 0.787 - - - - 0.787 - - - -

There are 508 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA