Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-141e20.2

Gene Name Gene ID Reads Annotation
si:ch211-141e20.2 ENSDARG00000093349 61 si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]










Genes with expression patterns similar to si:ch211-141e20.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-141e20.2 ENSDARG00000093349 61 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
2. hcst ENSDARG00000092074 172 1.879 - 1.000 - 0.879 - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
3. pvrl4 155 1.858 - 1.000 - - - 0.858 - - - poliovirus receptor-related 4
4. tekt1 ENSDARG00000101331 27 1.856 - 1.000 - - - - 0.856 - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
5. dre-mir-126b ENSDARG00000098981 40 1.845 - - 0.887 0.958 - - - - - dre-mir-126b [Source:miRBase;Acc:MI0010848]
6. zgc:171673 ENSDARG00000102473 256 1.802 - - - 0.868 - 0.934 - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
7. foxq1a ENSDARG00000030896 121 1.794 - 1.000 0.794 - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
8. cyp2j20 ENSDARG00000094057 44 1.78 - 1.000 - - 0.780 - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
9. her3 ENSDARG00000076857 131 1.767 - 1.000 - 0.767 - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
10. slc44a1a ENSDARG00000015946 10 1.766 - - - - - 0.931 - - 0.835 solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
11. zgc:153654 ENSDARG00000060322 9 1.751 - 1.000 - - - - - - 0.751 zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
12. aspn ENSDARG00000002192 218 1.751 - 1.000 - - 0.751 - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
13. prdm14 ENSDARG00000045371 106 1.748 - 1.000 - 0.748 - - - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
14. zgc:158464 ENSDARG00000100342 18 1.746 - - 0.890 - 0.856 - - - - zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
15. CR854923.1 CR854923.1 18 1.738 - - - - 0.857 0.881 - - -
16. TNFRSF14_4 TNFRSF14_4 5 1.721 - - - - 0.857 - - 0.864 -
17. CABZ01054405.1 CABZ01054405.1 115 1.706 - 1.000 - 0.706 - - - - -
18. si:dkeyp-79c2.1 42 1.705 - 1.000 - - - - 0.705 - - si:dkeyp-79c2.1, transcript variant X2
19. mirlet7i 192 1.684 - - 0.751 - - 0.933 - - - microRNA let-7i
20. FAM196A 82 1.635 - 0.901 - - - - - 0.734 - family with sequence similarity 196 member A
21. ugt5b4 ENSDARG00000091916 130 1.621 - - - 0.836 - 0.785 - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
22. mtx3 ENSDARG00000090195 42 1.615 - - - 0.897 - - - 0.718 - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
23. SLC41A2 SLC41A2 202 1.594 - - - 0.779 - 0.815 - - -
24. cxcl-c1c cxcl-c1c 159 1.587 - - - 0.851 - 0.736 - - -
25. dnajb6a ENSDARG00000004680 914 1.58 - - - 0.794 - 0.786 - - - DnaJ (Hsp40) homolog, subfamily B, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-45]
26. r3hdm4 ENSDARG00000063254 201 1.563 - - - 0.813 - - 0.750 - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
27. rnft2 ENSDARG00000053019 270 1.556 - 0.822 - 0.734 - - - - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
28. si:dkey-253d23.5 ENSDARG00000058566 237 1.546 - - 0.766 0.780 - - - - - si:dkey-253d23.5 [Source:ZFIN;Acc:ZDB-GENE-050208-729]
29. slc12a9 ENSDARG00000060366 293 1.532 - - 0.754 0.778 - - - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
30. ddx55 ENSDARG00000009864 415 1.511 - 0.704 - - - 0.807 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
31. si:ch211-80h18.1 ENSDARG00000078522 1941 1.491 - 0.710 - - - 0.781 - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
32. mvk ENSDARG00000004130 105 1.481 - 0.750 - - - - - 0.731 - mevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-041114-37]
33. si:dkey-93n13.2 ENSDARG00000092816 119 1.481 - - - 0.712 - 0.769 - - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
34. RFWD3 ENSDARG00000087752 167 1.479 - - 0.721 0.758 - - - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
35. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.462 - - - - 0.718 - - 0.744 - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
36. NAV2 NAV2 538 1.456 - - 0.744 - - 0.712 - - -
37. si:dkey-32n7.7 ENSDARG00000063444 4 1 - 1.000 - - - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
38. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
39. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
40. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - 1.000 - - - - - - -
41. calb1 ENSDARG00000031598 252 1 - 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
42. pif1 ENSDARG00000020289 216 1 - 1.000 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
43. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
44. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1 - 1.000 - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
45. TUBB2A TUBB2A 142 1 - 1.000 - - - - - - -
46. arl11l arl11l 31 1 - 1.000 - - - - - - -
47. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
48. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
49. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
50. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
51. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - 1.000 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
52. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
53. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
54. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
55. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
56. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
57. CR388095.2 ENSDARG00000117604 76 1 - 1.000 - - - - - - -
58. CU571323.1 CU571323.1 7 1 - 1.000 - - - - - - -
59. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
60. BX469915.2 BX469915.2 48 1 - 1.000 - - - - - - -
61. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
62. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
63. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
64. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
65. mir184 48 1 - 1.000 - - - - - - - microRNA 184
66. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
67. si:ch211-138k19.2 si:ch211-138k19.2 398 1 - 1.000 - - - - - - -
68. cdh10 cdh10 38 1 - 1.000 - - - - - - -
69. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
70. XRCC2 ENSDARG00000013933 15 1 - 1.000 - - - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
71. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
72. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
73. FP074874.2 ENSDARG00000105724 107 1 - 1.000 - - - - - - -
74. ifit2 ifit2 11 1 - 1.000 - - - - - - -
75. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
76. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
77. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
78. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
79. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
80. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
81. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
82. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
83. C6H3orf67 C6H3orf67 1 1 - 1.000 - - - - - - -
84. CR769772.1 ENSDARG00000092772 0 1 - 1.000 - - - - - - -
85. def6b ENSDARG00000044524 99 1 - 1.000 - - - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
86. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
87. nkiras2_1 ENSDARG00000052594 31 1 - 1.000 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
88. CABZ01041769.1 CABZ01041769.1 17 1 - 1.000 - - - - - - -
89. ddx26b 79 1 - 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
90. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
91. tagln3a ENSDARG00000079805 123 1 - 1.000 - - - - - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
92. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
93. DNAH10 ENSDARG00000061486 29 1 - 1.000 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
94. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
95. hoxc9a ENSDARG00000092809 18 1 - 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
96. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
97. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
98. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - 1.000 - - - - - - -
99. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - 1.000 - - - - - - -
100. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]

There are 1148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA