Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-140b10.6

Gene Name Gene ID Reads Annotation
si:ch211-140b10.6 ENSDARG00000045342 795 si:ch211-140b10.6 [Source:ZFIN;Acc:ZDB-GENE-091204-382]










Genes with expression patterns similar to si:ch211-140b10.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-140b10.6 ENSDARG00000045342 795 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-140b10.6 [Source:ZFIN;Acc:ZDB-GENE-091204-382]
2. CPEB4 CPEB4 3249 1.658 - - - - - - 0.874 0.784 -
3. smc4 ENSDARG00000038882 4373 1.566 - - - - - 0.768 - 0.798 - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
4. CR387996.1 ENSDARG00000097774 3037 1.529 - - - - - - 0.704 0.825 -
5. top2a ENSDARG00000024488 4273 1.518 - - - - - - 0.702 0.816 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
6. BX682552.2 BX682552.2 1427 1.514 - - - - - - 0.751 0.763 -
7. acy1 ENSDARG00000038475, ENSDARG00000111129 576 1.508 - - - - - - 0.702 0.806 - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
8. sox19b ENSDARG00000040266 532 0.946 - - - - - - - 0.946 - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
9. ivns1abpb ENSDARG00000013946 1972 0.94 - - - - - - - 0.940 - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
10. acin1b ENSDARG00000026842 3806 0.939 - - - - - - - 0.939 - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
11. MAD2L2_1 MAD2L2_1 705 0.936 - - - - - - - 0.936 -
12. Sep-03 Sep-03 1124 0.928 - - - - - - - 0.928 -
13. ENSDARG00000087348 ENSDARG00000087348 2870 0.924 - - - - - - - 0.924 -
14. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 0.924 - - - - - - - 0.924 - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
15. ache ENSDARG00000031796 1985 0.92 - - - - - - - 0.920 - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
16. rbm4.2 ENSDARG00000055080 5241 0.913 - - - - - - - 0.913 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
17. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 0.9 - - - - - - - 0.900 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
18. pafah1b1a ENSDARG00000032013 3183 0.896 - - - - - - - 0.896 - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
19. samm50 ENSDARG00000045814 4511 0.895 - - - - - - - 0.895 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
20. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.894 - - - - - - - 0.894 - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
21. stx1b ENSDARG00000000503 2724 0.882 - - - - - - - 0.882 - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
22. btg2 ENSDARG00000020298 6616 0.877 - - - - - - - 0.877 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
23. hipk3b ENSDARG00000062082 1248 0.871 - - - - - - - 0.871 - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
24. myef2 ENSDARG00000059398 6050 0.86 - - - - - - - 0.860 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
25. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.857 - - - - - - - 0.857 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
26. BX322612.1 BX322612.1 236 0.855 - - - - - - - 0.855 -
27. chd5 ENSDARG00000105083 132 0.855 - - - - - - - 0.855 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
28. XKR7 ENSDARG00000026333 175 0.854 - - - - - - - 0.854 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
29. rnf216 ENSDARG00000087893 518 0.854 - - - - - - - 0.854 - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
30. DEDD ENSDARG00000029783 530 0.854 - - - - - - - 0.854 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
31. ift20 ENSDARG00000040556 285 0.854 - - - - - - - 0.854 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
32. xkr6 xkr6 286 0.854 - - - - - - - 0.854 -
33. U6 U6 931 0.854 - - - - - - - 0.854 -
34. GRM2 GRM2 372 0.854 - - - - - - - 0.854 -
35. ZNF784_2 ZNF784_2 181 0.854 - - - - - - - 0.854 -
36. KIRREL3 ENSDARG00000115903 206 0.854 - - - - - - - 0.854 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
37. lrrc4.2 ENSDARG00000003020 235 0.854 - - - - - - - 0.854 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
38. grna ENSDARG00000004954 189 0.854 - - - - - - - 0.854 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
39. eef1a1a ENSDARG00000039502 234 0.853 - - - - - - - 0.853 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
40. CABZ01073424.1 ENSDARG00000107858 688 0.853 - - - - - - - 0.853 -
41. wdr92 ENSDARG00000037334 329 0.853 - - - - - - - 0.853 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
42. ppp1r8 ppp1r8 310 0.853 - - - - - - - 0.853 -
43. zgc:171727 ENSDARG00000105781 350 0.853 - - - - - - - 0.853 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
44. PRKDC ENSDARG00000075083 693 0.853 - - - - - - - 0.853 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
45. sh3bp5a ENSDARG00000100529 642 0.853 - - - - - - - 0.853 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
46. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.853 - - - - - - - 0.853 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
47. SIPA1L3 ENSDARG00000061699 268 0.853 - - - - - - - 0.853 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
48. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.853 - - - - - - - 0.853 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
49. rapgef1a ENSDARG00000043593 416 0.853 - - - - - - - 0.853 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
50. RBM33 RBM33 1954 0.853 - - - - - - - 0.853 -
51. bsk146 ENSDARG00000099069 274 0.852 - - - - - - - 0.852 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
52. ghitm 1443 0.852 - - - - - - - 0.852 - growth hormone inducible transmembrane protein
53. anapc5 ENSDARG00000008461 434 0.852 - - - - - - - 0.852 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
54. THEM4 ENSDARG00000061621 364 0.852 - - - - - - - 0.852 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
55. SB:CB827 SB:CB827 245 0.852 - - - - - - - 0.852 -
56. nkain4 ENSDARG00000062699 377 0.852 - - - - - - - 0.852 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
57. sgsm3 ENSDARG00000019038 352 0.851 - - - - - - - 0.851 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
58. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.851 - - - - - - - 0.851 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
59. pold3 ENSDARG00000076169 694 0.851 - - - - - - - 0.851 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
60. TTC28 ENSDARG00000114920 580 0.851 - - - - - - - 0.851 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
61. fstl5 ENSDARG00000040198 213 0.851 - - - - - - - 0.851 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
62. psmd5 ENSDARG00000059046 622 0.851 - - - - - - - 0.851 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
63. mapre3b ENSDARG00000102878 362 0.851 - - - - - - - 0.851 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
64. ezh1 ENSDARG00000037894 294 0.851 - - - - - - - 0.851 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
65. map7d2b ENSDARG00000045316 702 0.851 - - - - - - - 0.851 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
66. dok7 ENSDARG00000060236 364 0.85 - - - - - - - 0.850 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
67. MANEAL ENSDARG00000056450 262 0.85 - - - - - - - 0.850 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
68. snrpb ENSDARG00000011125 11729 0.85 - - - - - - - 0.850 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
69. LPL_1 LPL_1 1150 0.85 - - - - - - - 0.850 -
70. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.849 - - - - - - - 0.849 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
71. dennd5a ENSDARG00000017006 3426 0.849 - - - - - - - 0.849 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
72. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.849 - - - - - - - 0.849 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
73. wdr47a ENSDARG00000078136 522 0.849 - - - - - - - 0.849 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
74. si:ch211-195b13.1 ENSDARG00000016623 427 0.849 - - - - - - - 0.849 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
75. E2F1 ENSDARG00000103868 638 0.848 - - - - - - - 0.848 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
76. GANAB_1 GANAB_1 685 0.848 - - - - - - - 0.848 -
77. gltscr1l gltscr1l 782 0.848 - - - - - - - 0.848 -
78. tchp ENSDARG00000035605 1695 0.848 - - - - - - - 0.848 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
79. ufm1 ENSDARG00000043857 4152 0.848 - - - - - - - 0.848 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
80. irf2a ENSDARG00000007387 915 0.848 - - - - - - - 0.848 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
81. cetn2 ENSDARG00000101510 541 0.848 - - - - - - - 0.848 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
82. DVL3 1098 0.847 - - - - - - - 0.847 - dishevelled segment polarity protein 3
83. fzd3b ENSDARG00000058692 627 0.847 - - - - - - - 0.847 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
84. CR354611.2 CR354611.2 2040 0.847 - - - - - - - 0.847 -
85. crb2a ENSDARG00000060106 1307 0.847 - - - - - - - 0.847 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
86. B3GNT1 B3GNT1 601 0.847 - - - - - - - 0.847 -
87. pcdh10b ENSDARG00000102824 732 0.847 - - - - - - - 0.847 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
88. epb41a ENSDARG00000099283 860 0.847 - - - - - - - 0.847 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
89. LTN1 ENSDARG00000003984 1076 0.847 - - - - - - - 0.847 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
90. si:ch211-113e8.11 ENSDARG00000076585 721 0.846 - - - - - - - 0.846 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
91. dock7 ENSDARG00000078675 1995 0.846 - - - - - - - 0.846 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
92. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.846 - - - - - - - 0.846 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
93. ank3a ENSDARG00000061736 361 0.846 - - - - - - - 0.846 - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
94. TDG TDG 1191 0.846 - - - - - - - 0.846 -
95. PRRT2 ENSDARG00000103588 913 0.846 - - - - - - - 0.846 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
96. ankrd10b ENSDARG00000004771 654 0.846 - - - - - - - 0.846 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
97. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.846 - - - - - - - 0.846 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
98. ehd3 ENSDARG00000007869 3238 0.846 - - - - - - - 0.846 - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
99. SBNO2 SBNO2 773 0.845 - - - - - - - 0.845 -
100. plk4 ENSDARG00000004576 688 0.845 - - - - - - - 0.845 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]

There are 427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA