Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-139k8.2

Gene Name Gene ID Reads Annotation
si:ch211-139k8.2 143 si:ch211-139k8.2, transcript variant X4










Genes with expression patterns similar to si:ch211-139k8.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-139k8.2 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-139k8.2, transcript variant X4
2. TMC5 ENSDARG00000013252 22 1.818 - - - - - 0.904 0.914 - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
3. cd8a ENSDARG00000044797 7 1.802 - - - - - 0.904 0.898 - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
4. rs1 rs1 70 1.802 - - - - - 0.904 0.898 - -
5. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 1.72 - - - 0.816 - 0.904 - - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]
6. KCTD20 6 1.698 - - - - - 0.800 0.898 - - potassium channel tetramerization domain containing 20, transcript variant X2
7. si:dkey-192g7.3 ENSDARG00000094012 105 1.632 - - - 0.901 - - 0.731 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
8. zgc:111991 zgc:111991 159 1.622 - 0.734 - 0.888 - - - - -
9. myo6b ENSDARG00000042141 349 1.61 - - - 0.880 - 0.730 - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]
10. apooa ENSDARG00000104696 665 1.592 - 0.748 - 0.844 - - - - - apolipoprotein O, a [Source:ZFIN;Acc:ZDB-GENE-031118-91]
11. AL929322.1 AL929322.1 300 1.561 0.745 - - 0.816 - - - - -
12. zfyve9a ENSDARG00000101903 437 1.557 - 0.710 - 0.847 - - - - - zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
13. GEMIN6 ENSDARG00000105394 130 1.555 - - - - - 0.782 0.773 - - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
14. zgc:174310 ENSDARG00000076442 112 1.488 - - - - - 0.738 0.750 - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
15. kmo ENSDARG00000009160 7 1.48 - - - - - 0.744 0.736 - - kynurenine 3-monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030424-4]
16. micall2a ENSDARG00000102366 173 1.469 - - - - - 0.736 0.733 - - mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
17. pkn2 ENSDARG00000101983 1211 1.468 - 0.734 - 0.734 - - - - - protein kinase N2 [Source:ZFIN;Acc:ZDB-GENE-061207-42]
18. mettl21a ENSDARG00000012051 86 1.426 - 0.724 - - 0.702 - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
19. xkr8.2 ENSDARG00000076820 51 0.953 - - - 0.953 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
20. dytn ENSDARG00000071025 38 0.952 - - - - - - 0.952 - - dystrotelin [Source:ZFIN;Acc:ZDB-GENE-070124-2]
21. zgc:154125 ENSDARG00000071463 7 0.952 - - - - - - 0.952 - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
22. smyhc2 ENSDARG00000099115, ENSDARG00000103969, ENSDARG00000111606 153 0.952 - - - - - - 0.952 - - slow myosin heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-070822-12]
23. si:rp71-1c10.11 ENSDARG00000096721 39 0.948 - - - - - 0.948 - - - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
24. klc3 ENSDARG00000055965 116 0.946 - - - 0.946 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
25. BX324003.4 BX324003.4 24 0.945 - - - 0.945 - - - - -
26. si:ch211-103f14.3 ENSDARG00000088315 67 0.944 - - - - - 0.944 - - - si:ch211-103f14.3 [Source:ZFIN;Acc:ZDB-GENE-110411-160]
27. grm2a ENSDARG00000004150 64 0.938 - - - 0.938 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
28. si:dkey-93l1.9 13 0.937 - - - 0.937 - - - - - si:dkey-93l1.9
29. tpi1a ENSDARG00000025012 562 0.937 - - - 0.937 - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
30. SPA17 ENSDARG00000069361 141 0.936 - - - 0.936 - - - - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
31. NAPB_1 NAPB_1 33 0.935 - - - 0.935 - - - - -
32. pcdh1gb9 ENSDARG00000088475 71 0.934 - - - 0.934 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
33. C24H16orf11 C24H16orf11 32 0.932 - - - 0.932 - - - - -
34. trpa1b ENSDARG00000031875 39 0.931 - - - 0.931 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
35. VSTM2B VSTM2B 149 0.93 - - - 0.930 - - - - -
36. olfm1a ENSDARG00000018270 107 0.927 - - - 0.927 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
37. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.927 - - - 0.927 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
38. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 0.925 - - - 0.925 - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
39. tmem187 ENSDARG00000051989 136 0.924 - - - 0.924 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
40. prelp ENSDARG00000070597 99 0.923 - - - - - 0.923 - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
41. ubox5 ENSDARG00000058563 161 0.922 - - - 0.922 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
42. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.921 - - - 0.921 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
43. phyh ENSDARG00000086740 88 0.921 - - - 0.921 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
44. ids ENSDARG00000071699 265 0.92 - - - 0.920 - - - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
45. ftsjd1 ftsjd1 137 0.92 - - - 0.920 - - - - -
46. NRSN2 NRSN2 57 0.919 - - - 0.919 - - - - -
47. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.917 - - - 0.917 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
48. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.916 - - - 0.916 - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
49. gmcl1 ENSDARG00000020948 261 0.916 - - - 0.916 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
50. sox17 ENSDARG00000101717 11 0.916 - - - - - 0.916 - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
51. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.916 - - - 0.916 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
52. fam43b ENSDARG00000070222 92 0.914 - - - 0.914 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
53. LINS LINS 42 0.914 - - - - - - 0.914 - -
54. si:ch211-197h24.7 si:ch211-197h24.7 25 0.914 - - - - - - 0.914 - -
55. slc6a19a slc6a19a 41 0.914 - - - - - - 0.914 - -
56. CU856173.1 CU856173.1 26 0.914 - - - - - - 0.914 - -
57. ano2 ENSDARG00000101363 50 0.914 - - - - - - 0.914 - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
58. CCDC134_1 CCDC134_1 200 0.914 - - - - - - 0.914 - -
59. si:ch211-152p23.2 ENSDARG00000094519 4 0.914 - - - - - - 0.914 - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
60. si:dkey-238m4.1 si:dkey-238m4.1 71 0.914 - - - - - - 0.914 - -
61. psma6l ENSDARG00000043899 3 0.914 - - - - - - 0.914 - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
62. U1_33 U1_33 76 0.914 - - - - - - 0.914 - -
63. CU855821.2 CU855821.2 21 0.914 - - - - - - 0.914 - -
64. zgc:153738 ENSDARG00000069230 84 0.914 - - - - - - 0.914 - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
65. rtn4rl2b ENSDARG00000037495 11 0.914 - - - - - - 0.914 - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
66. map3k3 ENSDARG00000060348 1482 0.913 - - - 0.913 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
67. itprip ENSDARG00000015576 62 0.913 - - - 0.913 - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
68. si:dkey-261e22.5 si:dkey-261e22.5 68 0.911 - - - 0.911 - - - - -
69. cx39.9 ENSDARG00000004082 148 0.91 - - - - - - 0.910 - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
70. si:ch211-161h7.5 ENSDARG00000093044 12 0.91 - - - - - - 0.910 - - si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
71. APOBEC2 APOBEC2 9 0.91 - - - - - - 0.910 - -
72. CABZ01118627.1 CABZ01118627.1 18 0.91 - - - - - - 0.910 - -
73. tmem222b ENSDARG00000104097 132 0.91 - - - 0.910 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
74. ADAP2 ENSDARG00000070565 29 0.91 - - - - - - 0.910 - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
75. si:ch211-202n12.2 ENSDARG00000096665 4 0.91 - - - - - - 0.910 - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
76. pclob ENSDARG00000098880 60 0.91 - - - - - - 0.910 - - piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]
77. mcm5_1 ENSDARG00000019507 10 0.91 - - - - - - 0.910 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
78. nos1apb ENSDARG00000058701 148 0.909 - - - 0.909 - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
79. lrrcc1 ENSDARG00000078535 118 0.908 - - - 0.908 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
80. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.907 - - - - - 0.907 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
81. dnah9l ENSDARG00000062630 268 0.905 - - - 0.905 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
82. vgf ENSDARG00000105529 247 0.905 - - - 0.905 - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
83. CU468012.1 ENSDARG00000077794 3 0.904 - - - - - 0.904 - - -
84. si:ch211-157l15.4 si:ch211-157l15.4 92 0.904 - - - - - 0.904 - - -
85. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.904 - - - - - 0.904 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
86. si:ch211-271e10.1 ENSDARG00000095735 15 0.904 - - - - - 0.904 - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
87. DXO ENSDARG00000036852 16 0.904 - - - - - 0.904 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
88. traf1 ENSDARG00000069482 50 0.904 - - - - - 0.904 - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
89. XCR1 XCR1 9 0.904 - - - - - 0.904 - - -
90. si:dkeyp-66d7.5 si:dkeyp-66d7.5 1 0.904 - - - - - 0.904 - - -
91. ENTPD5 ENTPD5 42 0.904 - - - - - 0.904 - - -
92. CU855880.2 CU855880.2 3 0.904 - - - - - 0.904 - - -
93. sh3bp1 ENSDARG00000078119 5 0.904 - - - - - 0.904 - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
94. TGFBR3L TGFBR3L 16 0.904 - - - - - 0.904 - - -
95. si:dkey-126g1.6 si:dkey-126g1.6 1 0.904 - - - - - 0.904 - - -
96. fam136a ENSDARG00000098401 50 0.904 - - - - - 0.904 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
97. grk7a ENSDARG00000020602 10 0.904 - - - - - 0.904 - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
98. RNF222 24 0.904 - - - - - 0.904 - - - ring finger protein 222
99. mthfsd ENSDARG00000062042 34 0.904 - - - - - 0.904 - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
100. si:ch211-67f13.7 ENSDARG00000077845 8 0.904 - - - - - 0.904 - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]

There are 962 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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