Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-133l5.5

Gene Name Gene ID Reads Annotation
si:ch211-133l5.5 si:ch211-133l5.5 123










Genes with expression patterns similar to si:ch211-133l5.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-133l5.5 si:ch211-133l5.5 123 5 - - 1.000 1.000 1.000 - - 1.000 1.000
2. RCVRN_1 RCVRN_1 46 3.978 - - 1.000 0.982 - - - 1.000 0.996
3. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 3.953 - - 1.000 0.990 - - - 0.964 0.999 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
4. ETV3L ETV3L 67 2.998 - - 1.000 - - - - 1.000 0.998
5. gnb3b ENSDARG00000002696 46 2.939 - - - 0.946 - - - 1.000 0.993 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
6. arr3a ENSDARG00000056511, ENSDARG00000114648 192 2.892 - - - 0.897 - - - 1.000 0.995 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
7. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 2.855 - - - 0.901 - - - 0.995 0.959 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
8. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.824 - - 0.987 - - - - 0.978 0.859 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
9. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.737 - - 1.000 0.751 - - - - 0.986 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
10. saga ENSDARG00000012610 63 2.718 - - - 0.796 - - - 0.988 0.934 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
11. rpe65a ENSDARG00000007480 52 2.639 - - 0.749 0.919 - - - - 0.971 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
12. UNC119 UNC119 104 2 - - 1.000 - - - - - 1.000
13. gngt2b ENSDARG00000103543 132 1.999 - - - - - - - 1.000 0.999 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
14. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.996 - - 1.000 - - - - - 0.996 guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
15. sagb ENSDARG00000038378 28 1.991 - - - - - - - 0.998 0.993 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
16. CABZ01068819.1 CABZ01068819.1 20 1.991 - - 1.000 - - - - - 0.991
17. zgc:109965 ENSDARG00000012126 11 1.977 - - 1.000 0.977 - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
18. slc6a2 ENSDARG00000016141 49 1.962 - - - - - - - 0.999 0.963 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
19. crx ENSDARG00000011989, ENSDARG00000113850 330 1.958 - - 1.000 0.958 - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
20. grk7a ENSDARG00000020602 10 1.953 - - - 0.953 - - - - 1.000 G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
21. fut9d ENSDARG00000028098 427 1.947 - - - - - - - 0.963 0.984 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
22. gnat2 ENSDARG00000042529 112 1.946 - - 1.000 - - - - - 0.946 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
23. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.945 - - - - - - - 0.997 0.948 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
24. guk1b ENSDARG00000005776 23 1.93 - - 1.000 - - - - - 0.930 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
25. si:ch211-130m23.2 ENSDARG00000095136 121 1.916 - - - - - - - 0.982 0.934 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
26. TULP1 TULP1 50 1.909 - - - - - - - 0.992 0.917
27. muc13a ENSDARG00000069559 985 1.901 - - - - - - - 0.985 0.916 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
28. cck cck 62 1.881 - - 0.935 - - - - 0.946 -
29. dhrs9 ENSDARG00000019260 250 1.875 - - - - - - - 0.949 0.926 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
30. si:ch73-211l2.1 605 1.868 - - - - - - - 0.956 0.912 si:ch73-211l2.1
31. ppp1r3da ENSDARG00000077513 109 1.85 - - - - - - - 0.936 0.914 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
32. CR974475.2 CR974475.2 38 1.84 - - 0.935 - - - - - 0.905
33. si:ch211-117m20.5 ENSDARG00000091996 7246 1.835 - - - - - - - 0.965 0.870 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
34. aanat2 ENSDARG00000079802 175 1.821 - - - - - - - 0.902 0.919 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
35. th ENSDARG00000030621, ENSDARG00000109947 6 1.815 - - 0.928 0.887 - - - - - tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
36. zgc:163030 ENSDARG00000069192 2963 1.804 - - - - - - - 0.832 0.972 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
37. NPFFR1 ENSDARG00000111997 29 1.788 - - 0.800 - - - - - 0.988 neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
38. zgc:158340 zgc:158340 21 1.77 - - 0.843 - - - - - 0.927
39. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 1.761 - - - 0.806 - - - - 0.955 recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
40. ncaldb ENSDARG00000011334 123 1.759 - - - - - - - 0.897 0.862 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
41. tgm1l4 ENSDARG00000101407 800 1.745 - - - - - - - 0.872 0.873 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
42. phlda3 ENSDARG00000037804 1116 1.743 - - - - - - - 0.922 0.821 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
43. scamp2l ENSDARG00000017010 491 1.743 - - - - - - - 0.837 0.906 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
44. SLC5A8 ENSDARG00000087120 60 1.733 - - - - 0.799 - - 0.934 - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
45. flh flh 47 1.723 - - 0.735 0.988 - - - - -
46. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.722 - - - - - - - 0.827 0.895 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
47. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.704 - - - - - - - 0.768 0.936 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
48. ap1s3b ENSDARG00000027966 1064 1.692 - - - - - - - 0.869 0.823 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
49. cyp26a1 ENSDARG00000033999 1136 1.676 - - - - - - - 0.773 0.903 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
50. rbp4l ENSDARG00000044684 3292 1.671 - - - - - - - 0.913 0.758 retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
51. casp9 ENSDARG00000004325 306 1.67 - - - - - - - 0.942 0.728 caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
52. CABZ01048956.1 ENSDARG00000117474 253 1.669 - - - - - - - 0.712 0.957 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
53. otud3 ENSDARG00000022648 263 1.641 - - - - - - - 0.894 0.747 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
54. fam46ba 4575 1.64 - - - - - - - 0.849 0.791 family with sequence similarity 46, member Ba
55. CCDC64B CCDC64B 337 1.622 - - - - - - - 0.820 0.802
56. exosc2 ENSDARG00000028688 726 1.573 - - - - - - - 0.809 0.764 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
57. sh3bp5b ENSDARG00000103978 513 1.55 - - - - - - - 0.828 0.722 SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
58. kcnab2b ENSDARG00000062134 80 1.54 - - - - 0.830 - - - 0.710 potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
59. gnat1 ENSDARG00000044199 251 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
60. dock3 ENSDARG00000063180 2 1 - - 1.000 - - - - - - dedicator of cytokinesis 3 [Source:ZFIN;Acc:ZDB-GENE-100624-1]
61. CABZ01117474.1 CABZ01117474.1 2 1 - - 1.000 - - - - - -
62. themis ENSDARG00000010619 5 1 - - 1.000 - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
63. si:ch211-166e11.1 si:ch211-166e11.1 1 1 - - 1.000 - - - - - -
64. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
65. ccnd3 ENSDARG00000027391 1 1 - - 1.000 - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
66. nptx2b ENSDARG00000045164 5 1 - - 1.000 - - - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
67. ENSDARG00000089816 ENSDARG00000089816 4 1 - - 1.000 - - - - - -
68. si:ch211-57i17.2 ENSDARG00000093354 58 1 - - 1.000 - - - - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
69. ft2 ENSDARG00000109567 5 1 - - 1.000 - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
70. sftpbb ENSDARG00000067566 13 1 - - 1.000 - - - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
71. med11 ENSDARG00000086416 13 1 - - - - - - - 1.000 - mediator complex subunit 11 [Source:ZFIN;Acc:ZDB-GENE-091207-2]
72. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - - 1.000 - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
73. kcnk15 ENSDARG00000077371 1 1 - - 1.000 - - - - - - potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
74. rxfp1 ENSDARG00000090071 6 1 - - 1.000 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
75. CR848788.1 ENSDARG00000103037 1 1 - - 1.000 - - - - - -
76. BX548011.3 ENSDARG00000113526 2 1 - - 1.000 - - - - - -
77. CU929036.1 CU929036.1 7 1 - - 1.000 - - - - - -
78. slc6a14 ENSDARG00000029866 61 1 - - 1.000 - - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
79. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - 1.000 - - - - - -
80. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - 1.000 - - - - - -
81. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - 1.000 - - - - - -
82. si:ch211-176m18.1 si:ch211-176m18.1 27 1 - - 1.000 - - - - - -
83. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - 1.000 - - - - - -
84. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1 - - - - - - - 1.000 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
85. RP1 ENSDARG00000077687 6 1 - - 1.000 - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
86. snoU13 snoU13 2 1 - - 1.000 - - - - - -
87. BX510935.2 BX510935.2 1 1 - - 1.000 - - - - - -
88. SIPA1L2 ENSDARG00000061640 2 1 - - 1.000 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
89. trim54 ENSDARG00000029907 10 1 - - 1.000 - - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
90. ZNF70_3 ZNF70_3 0 1 - - 1.000 - - - - - -
91. rasgrf2b ENSDARG00000002816, ENSDARG00000115886 0 1 - - 1.000 - - - - - - Ras protein-specific guanine nucleotide-releasing factor 2b [Source:ZFIN;Acc:ZDB-GENE-060504-1]
92. pcdh2ab6 ENSDARG00000091043 1 1 - - 1.000 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
93. BX901889.2 ENSDARG00000078427 0 1 - - 1.000 - - - - - -
94. zgc:153151 ENSDARG00000069563 126 1 - - 1.000 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
95. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 1 - - 1.000 - - - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
96. got1 ENSDARG00000039093 1 1 - - 1.000 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
97. CU464131.1 CU464131.1 0 1 - - 1.000 - - - - - -
98. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
99. CR759816.1 ENSDARG00000098977 27 1 - - 1.000 - - - - - -
100. si:dkey-26c10.5 ENSDARG00000088023 9 1 - - 1.000 - - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]

There are 841 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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