Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-127i16.2

Gene Name Gene ID Reads Annotation
si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]










Genes with expression patterns similar to si:ch211-127i16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
2. crb2b ENSDARG00000060081 144 1.736 - - - - - 0.944 - - 0.792 crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
3. srd5a3 ENSDARG00000043307 142 1.715 0.922 - - - - - 0.793 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
4. dhrs9 ENSDARG00000019260 250 1.712 0.911 - - - - - - - 0.801 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
5. BX664721.1 ENSDARG00000051804 21 1.709 - - - - 0.861 0.848 - - -
6. slc6a13l 121 1.699 - 0.788 - - - 0.911 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
7. insl5a ENSDARG00000070966, ENSDARG00000112563 45 1.697 0.849 - - - - 0.848 - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
8. sfrp5 ENSDARG00000039041 1777 1.695 0.878 0.817 - - - - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
9. pcdh1b ENSDARG00000036175 101 1.671 - 0.832 - - - 0.839 - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
10. zgc:136791 97 1.667 0.940 - - - - - 0.727 - - zgc:136791, transcript variant X3
11. dnajc12 ENSDARG00000086691 260 1.664 0.796 - - - - - 0.868 - - DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
12. si:ch211-222k6.3 ENSDARG00000071578 127 1.65 0.925 0.725 - - - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
13. zgc:92326 zgc:92326 94 1.648 - 0.808 - - - 0.840 - - -
14. zgc:173548 ENSDARG00000070048 558 1.638 0.859 0.779 - - - - - - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
15. strumpellin 212 1.629 0.884 - - - - 0.745 - - - strumpellin
16. tbcc ENSDARG00000022918 386 1.628 0.855 - - - - 0.773 - - - tubulin folding cofactor C [Source:ZFIN;Acc:ZDB-GENE-041008-103]
17. FAM132B FAM132B 39 1.619 - - - - - 0.851 0.768 - -
18. rxrab ENSDARG00000035127 231 1.61 - 0.837 - - - 0.773 - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
19. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.605 - - - - - 0.855 0.750 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
20. b3gnt3.4 ENSDARG00000058100 117 1.604 - 0.856 - - - 0.748 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
21. col12a1a ENSDARG00000078322 1833 1.603 - 0.808 - - 0.795 - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
22. CR925758.1 CR925758.1 83 1.597 0.824 0.773 - - - - - - -
23. CCDC132 CCDC132 267 1.591 0.880 0.711 - - - - - - -
24. zgc:113019 ENSDARG00000099743 994 1.589 0.868 - - - - - 0.721 - - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
25. MIER3 MIER3 114 1.582 - - - - - 0.849 0.733 - -
26. ildr1b ENSDARG00000040910 169 1.579 0.849 - - - - 0.730 - - - immunoglobulin-like domain containing receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040912-72]
27. pargl ENSDARG00000101719 155 1.576 - - - - 0.800 - 0.776 - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
28. cdc45 ENSDARG00000043720 353 1.572 - 0.770 - - - 0.802 - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
29. elovl4b ENSDARG00000027495 107 1.572 - - - - 0.845 - - - 0.727 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
30. C5H9orf78 C5H9orf78 1550 1.57 0.868 0.702 - - - - - - -
31. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.566 0.835 0.731 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
32. ncaldb ENSDARG00000011334 123 1.558 - - - - - 0.737 - - 0.821 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
33. CR396586.2 CR396586.2 103 1.552 0.844 - - - - - - - 0.708
34. slc1a9 ENSDARG00000098269 12 1.551 - - - - - 0.807 0.744 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
35. scamp2l ENSDARG00000017010 491 1.551 - - - - - 0.737 - - 0.814 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
36. rapgef5a ENSDARG00000075271 282 1.549 - - - - - 0.788 - - 0.761 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
37. SLC41A2 SLC41A2 202 1.547 - 0.777 - - - - 0.770 - -
38. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.547 - 0.836 - - - - 0.711 - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
39. slc6a6a ENSDARG00000012534 183 1.541 0.840 - - - - - 0.701 - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
40. si:ch73-269m14.4 ENSDARG00000086612 20 1.533 - - - - - 0.820 0.713 - - si:ch73-269m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-94]
41. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 1.528 0.754 - - - - 0.774 - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
42. uggt2 ENSDARG00000062089 661 1.527 0.744 0.783 - - - - - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
43. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1.527 0.816 - - - - 0.711 - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
44. IER2 IER2 604 1.521 - - - - - 0.767 - - 0.754
45. CR388068.1 CR388068.1 481 1.521 0.723 - - - - - - - 0.798
46. wu:fc32g12 wu:fc32g12 198 1.52 - 0.755 - - - - 0.765 - -
47. bmp7a ENSDARG00000018260 92 1.516 0.753 0.763 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
48. SNCAIP ENSDARG00000100198 522 1.513 - - - - - 0.725 0.788 - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
49. gadd45bb ENSDARG00000013576 331 1.512 - - - - - - 0.740 - 0.772 growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
50. dolpp1 ENSDARG00000036915 114 1.51 - 0.778 - - - 0.732 - - - dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11]
51. adhfe1 ENSDARG00000053518 499 1.508 0.767 0.741 - - - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
52. tmem168a ENSDARG00000068705 498 1.507 0.757 0.750 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
53. ERCC6L2 ENSDARG00000012403 236 1.506 - - - - - 0.780 0.726 - - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
54. CABZ01074081.1 CABZ01074081.1 109 1.504 - 0.744 - - - - - - 0.760
55. CTIF ENSDARG00000090617 270 1.496 - - - - 0.702 0.794 - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
56. slc35b1 ENSDARG00000038213 465 1.496 0.709 - - - - - - - 0.787 solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
57. cyba ENSDARG00000018283 702 1.492 - 0.713 - - - - 0.779 - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
58. ttc19 ENSDARG00000074435 249 1.49 - 0.777 - - 0.713 - - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
59. edem2 ENSDARG00000028448 236 1.485 0.745 - - - - 0.740 - - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
60. trim25l ENSDARG00000020863 292 1.48 - 0.725 - - - 0.755 - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
61. ESCO1 ENSDARG00000077057 1112 1.479 0.745 - - - - - - - 0.734 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
62. rn7sk ENSDARG00000081270 149 1.471 - - - - - - 0.724 - 0.747 RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
63. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 1.465 0.763 0.702 - - - - - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
64. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 1.465 - - - - - 0.705 - - 0.760 potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
65. uhrf1bp1l ENSDARG00000004055 419 1.458 - 0.713 - - - 0.745 - - - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
66. nrp2b ENSDARG00000038446 783 1.457 - - - - - 0.737 - - 0.720 neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
67. efnb2b ENSDARG00000074050 77 1.455 - - - - - 0.741 0.714 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
68. arl5a ENSDARG00000018627, ENSDARG00000117003 588 1.447 - 0.739 - - - 0.708 - - - ADP-ribosylation factor-like 5A [Source:ZFIN;Acc:ZDB-GENE-040718-28]
69. miox ENSDARG00000002764 588 1.446 - 0.733 - - - 0.713 - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
70. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.435 - 0.729 - - - 0.706 - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
71. slc27a6 ENSDARG00000046053 57 0.968 0.968 - - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
72. si:ch211-224l10.4 ENSDARG00000088762 36 0.964 0.964 - - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
73. tmco4 ENSDARG00000078924 330 0.962 0.962 - - - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
74. TRIM14_2 TRIM14_2 15 0.958 - - - - - 0.958 - - -
75. pgls ENSDARG00000021233 264 0.957 0.957 - - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
76. BX649498.2 BX649498.2 40 0.955 - - - - - 0.955 - - -
77. ccdc103 ENSDARG00000053455 81 0.954 0.954 - - - - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
78. mctp2a ENSDARG00000001414 307 0.954 0.954 - - - - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
79. cyth4b ENSDARG00000103984 27 0.948 - - - - - 0.948 - - - cytohesin 4b [Source:ZFIN;Acc:ZDB-GENE-080219-45]
80. si:dkey-152b24.7 ENSDARG00000099715 26 0.948 - - - - - 0.948 - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
81. dhcr24 ENSDARG00000013236 61 0.946 - - - - - 0.946 - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
82. BX649494.1 BX649494.1 195 0.946 0.946 - - - - - - - -
83. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.946 0.946 - - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
84. si:dkey-20i10.7 ENSDARG00000075269 133 0.946 0.946 - - - - - - - - si:dkey-20i10.7 [Source:ZFIN;Acc:ZDB-GENE-090313-232]
85. DOCK1 ENSDARG00000099093 21 0.943 0.943 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
86. six4.3 six4.3 492 0.943 0.943 - - - - - - - -
87. si:ch211-239j9.1 ENSDARG00000096319 27 0.942 0.942 - - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
88. stx8 ENSDARG00000103173 180 0.942 0.942 - - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
89. comtd1 ENSDARG00000078918 238 0.94 0.940 - - - - - - - - catechol-O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1072]
90. ctslb_1 ENSDARG00000039173, ENSDARG00000074306 486 0.94 0.940 - - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
91. mirlet7a-6 15 0.94 0.940 - - - - - - - - microRNA let7a-6
92. myhb ENSDARG00000001993 11 0.94 0.940 - - - - - - - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
93. mfsd4a mfsd4a 179 0.94 0.940 - - - - - - - -
94. CR762484.3 CR762484.3 395 0.94 0.940 - - - - - - - -
95. AC024175.9 AC024175.9 56 0.94 0.940 - - - - - - - -
96. CABZ01099881.1 CABZ01099881.1 4 0.94 0.940 - - - - - - - -
97. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 0.94 0.940 - - - - - - - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
98. ENSDARG00000039608 ENSDARG00000039608 23 0.94 0.940 - - - - - - - -
99. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.94 0.940 - - - - - - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
100. TMEM98 ENSDARG00000059743 214 0.94 0.940 - - - - - - - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]

There are 1315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA