Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-10j20.7

Gene Name Gene ID Reads Annotation
si:ch211-10j20.7 si:ch211-10j20.7 8










Genes with expression patterns similar to si:ch211-10j20.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-10j20.7 si:ch211-10j20.7 8 5 1.000 1.000 - - 1.000 - 1.000 1.000 -
2. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 3 1.000 1.000 - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
3. CSMD1 CSMD1 15 2.587 1.000 0.731 - - - - 0.856 - -
4. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
5. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
6. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
7. si:dkey-56m15.4 si:dkey-56m15.4 39 2 1.000 1.000 - - - - - - -
8. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
9. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
10. SEMA6B SEMA6B 35 2 - 1.000 - - - - 1.000 - -
11. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 2 - 1.000 - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
12. nitr3a_1 ENSDARG00000110676 44 2 - 1.000 - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
13. CR847504.1 ENSDARG00000102515 29 1.958 - 1.000 - - - - 0.958 - -
14. kcnip3a ENSDARG00000034229 63 1.933 - 1.000 - - - - 0.933 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
15. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.904 1.000 - - - - - 0.904 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
16. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
17. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
18. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
19. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
20. si:rp71-1f1.4 ENSDARG00000092476 11 1.875 - 1.000 - - - - - 0.875 - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
21. si:ch73-60p2.1 si:ch73-60p2.1 21 1.874 - - - - - - 0.933 0.941 -
22. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
23. odf3l2 36 1.86 1.000 - - - 0.860 - - - - outer dense fiber of sperm tails 3-like 2
24. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
25. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
26. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.833 - 1.000 - - - - - 0.833 -
27. ubxn1_1 ENSDARG00000090309 38 1.831 0.849 - - - - - 0.982 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
28. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
29. kcnt1 ENSDARG00000079484 45 1.794 1.000 - - - - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
30. WNK3 WNK3 36 1.794 - 1.000 - - - - 0.794 - -
31. slc9a3.2 ENSDARG00000036722 31 1.794 - - - - - - 0.853 0.941 - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
32. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
33. il11a ENSDARG00000037859 5 1.771 0.771 - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
34. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
35. SERINC3 SERINC3 21 1.761 - 1.000 - - - - - 0.761 -
36. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
37. disp2 ENSDARG00000042846 53 1.751 0.896 - - - - - 0.855 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
38. cep128 ENSDARG00000103771 75 1.746 0.940 - - - - - 0.806 - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
39. npffr1l3 ENSDARG00000010712 18 1.731 - 0.731 - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
40. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
41. oprk1 ENSDARG00000006894 43 1.72 - - - - 0.744 - 0.976 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
42. fgf10b ENSDARG00000100475 17 1.714 - - - - - - 0.976 0.738 - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
43. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
44. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
45. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
46. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
47. C2CD3 ENSDARG00000074137 51 1.658 0.802 - - - - - 0.856 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
48. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
49. NLRC5 ENSDARG00000024631 11 1.641 - - - - 0.796 - 0.845 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
50. FP085391.2 FP085391.2 85 1.638 - - - - 0.782 - 0.856 - -
51. si:dkey-165i8.5 si:dkey-165i8.5 21 1.627 0.854 - - - - - 0.773 - -
52. si:dkey-1h6.8 ENSDARG00000096703 45 1.611 0.771 - - - - - 0.840 - - si:dkey-1h6.8 [Source:ZFIN;Acc:ZDB-GENE-130603-8]
53. grnas ENSDARG00000091885 71 1.605 - 0.731 - - - - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
54. dmtn ENSDARG00000013110 791 1.531 0.810 - - - - - 0.721 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
55. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
56. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
57. KCNAB2 KCNAB2 129 1.487 0.733 - - - 0.754 - - - -
58. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
59. si:ch211-76l23.6 si:ch211-76l23.6 68 1.41 - 0.709 - - - - 0.701 - -
60. si:ch73-290k24.5 ENSDARG00000076310 39 1 - 1.000 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
61. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
62. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
63. si:dkey-179k24.6 si:dkey-179k24.6 5 1 1.000 - - - - - - - -
64. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
65. rtn4rl2a ENSDARG00000052012 5 1 - 1.000 - - - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
66. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
67. fabp10a ENSDARG00000038439 4 1 - 1.000 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
68. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
69. si:dkey-233h12.2 si:dkey-233h12.2 1 1 1.000 - - - - - - - -
70. dnajb2 ENSDARG00000058644 30 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
71. U1_35 U1_35 1 1 - - - - - - 1.000 - -
72. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
73. LPHN1_1 LPHN1_1 7 1 1.000 - - - - - - - -
74. CT867973.1 ENSDARG00000114801 13 1 - 1.000 - - - - - - -
75. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
76. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
77. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
78. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
79. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
80. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
81. PGBD4_5 PGBD4_5 16 1 - 1.000 - - - - - - -
82. si:dkey-78a14.4 ENSDARG00000036066 17 1 - 1.000 - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
83. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - 1.000 - - - - - - -
84. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
85. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
86. rccd1_1 ENSDARG00000071074 24 1 1.000 - - - - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
87. mir92b 95 1 - 1.000 - - - - - - - microRNA 92b
88. CABZ01021454.2 CABZ01021454.2 3 1 1.000 - - - - - - - -
89. dbpa ENSDARG00000063014 107 1 - - - - - - 1.000 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
90. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
91. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
92. PGBD4_4 PGBD4_4 15 1 - - - - - - 1.000 - -
93. XKR8 XKR8 9 1 - - - - - - 1.000 - -
94. adora1 adora1 149 1 - 1.000 - - - - - - -
95. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
96. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1 - 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
97. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
98. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
99. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
100. CABZ01032469.1 CABZ01032469.1 34 1 1.000 - - - - - - - -

There are 1175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA