Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-106g4.2

Gene Name Gene ID Reads Annotation
si:ch211-106g4.2 si:ch211-106g4.2 6










Genes with expression patterns similar to si:ch211-106g4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-106g4.2 si:ch211-106g4.2 6 4 1.000 - 1.000 - - - 1.000 1.000 -
2. si:dkey-256e7.8 ENSDARG00000092022 4 2 1.000 - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
3. fgf10b ENSDARG00000100475 17 2 1.000 - 1.000 - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
4. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1.98 - - 1.000 - - - 0.980 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
5. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.778 0.778 - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
6. ZNF408 ENSDARG00000036043 232 1.771 0.930 - - - - - 0.841 - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
7. BX571811.1 ENSDARG00000105621 25 1.766 - - 0.846 - - - 0.920 - -
8. si:dkey-202i12.5 si:dkey-202i12.5 20 1.736 1.000 - - - - - - 0.736 -
9. thap7 ENSDARG00000070704 225 1.736 1.000 - - - - - 0.736 - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
10. camkk1 camkk1 542 1.712 0.827 - - - - - 0.885 - -
11. fam46a fam46a 92 1.691 0.762 - - - - - 0.929 - -
12. tjap1 ENSDARG00000010681 457 1.688 0.812 - - - - - 0.876 - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
13. RAB35 RAB35 4 1.663 0.878 - 0.785 - - - - - -
14. traip ENSDARG00000011262 410 1.532 0.791 - - - - - 0.741 - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
15. SEMA4D ENSDARG00000067801 5 1.516 - - 0.702 - - - - 0.814 - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
16. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
17. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
18. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
19. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
20. CR626907.2 ENSDARG00000095315 1 1 - - - - - - - 1.000 - si:dkey-52d15.2 [Source:NCBI gene;Acc:100006993]
21. U6_13 U6_13 0 1 - - 1.000 - - - - - -
22. CR749741.2 CR749741.2 15 1 1.000 - - - - - - - -
23. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
24. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
25. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
26. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
27. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
28. FP236851.1 FP236851.1 10 1 1.000 - - - - - - - -
29. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
30. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
31. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
32. or137-1 ENSDARG00000105789 2 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
33. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
34. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
35. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
36. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
37. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
38. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
39. akap8l ENSDARG00000099635 2 1 - - - - - - - 1.000 - A kinase (PRKA) anchor protein 8-like [Source:ZFIN;Acc:ZDB-GENE-040426-2303]
40. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
41. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
42. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
43. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
44. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
45. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
46. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
47. SNORA62 SNORA62 39 1 1.000 - - - - - - - -
48. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
49. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
50. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
51. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
52. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
53. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
54. adipoqb ENSDARG00000100086 5 1 - - - - - - - 1.000 - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
55. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
56. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
57. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
58. dock1 ENSDARG00000099093 10 1 1.000 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
59. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
60. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - - - - - - - 1.000 -
61. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
62. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
63. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
64. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
65. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
66. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
67. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
68. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
69. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
70. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
71. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
72. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
73. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
74. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 - - - - - - 1.000 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
75. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
76. card9 ENSDARG00000067672 33 1 1.000 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
77. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
78. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
79. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
80. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
81. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
82. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
83. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
84. si:dkey-187i8.2 ENSDARG00000096624 8 1 - - - - - - - 1.000 - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
85. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
86. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
87. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
88. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
89. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
90. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
91. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
92. TOR4A TOR4A 70 1 1.000 - - - - - - - -
93. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
94. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
95. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
96. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1 - - - - - - - 1.000 - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
97. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
98. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
99. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
100. CU929160.1 ENSDARG00000110056 9 1 - - - - - - - 1.000 -

There are 778 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA