Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-280h16.1

Gene Name Gene ID Reads Annotation
si:ch1073-280h16.1 si:ch1073-280h16.1 229










Genes with expression patterns similar to si:ch1073-280h16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-280h16.1 si:ch1073-280h16.1 229 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ARSJ ENSDARG00000077590 684 2.299 - 0.771 - 0.798 - - 0.730 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
3. ENSDARG00000086878 ENSDARG00000086878 332 1.734 - - - - - 0.814 0.920 - -
4. got1l1 ENSDARG00000053644 49 1.725 - 0.873 - 0.852 - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
5. olfm1a ENSDARG00000018270 107 1.692 - - - - - 0.840 0.852 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
6. mcm9 ENSDARG00000013528 212 1.677 - 0.906 - - - 0.771 - - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
7. pld3 ENSDARG00000068199 205 1.673 - - - - - 0.821 0.852 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
8. glipr2l ENSDARG00000016837 440 1.67 - - - 0.836 - 0.834 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
9. uvrag ENSDARG00000023815 424 1.652 - 0.867 - - - 0.785 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
10. si:ch211-106h11.3 ENSDARG00000027360 154 1.632 - 0.818 - 0.814 - - - - - si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
11. ablim1a ENSDARG00000060149 228 1.627 - - - - - 0.768 0.859 - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
12. ENSDARG00000092910 ENSDARG00000092910 44 1.623 - - - 0.808 - - 0.815 - -
13. adarb1a ENSDARG00000041609 476 1.623 - - - 0.831 - 0.792 - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
14. BX004890.2 BX004890.2 84 1.616 - 0.809 - - - 0.807 - - -
15. nfyba ENSDARG00000039185 1804 1.61 - - - - - 0.761 0.849 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
16. ube3a ENSDARG00000055737 1874 1.602 - 0.769 - - - 0.833 - - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
17. CCDC142 ENSDARG00000101377 161 1.6 - - - - - 0.871 0.729 - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
18. hecw1 hecw1 241 1.595 - - - 0.796 - 0.799 - - -
19. BX649494.1 BX649494.1 195 1.592 - 0.802 - - - 0.790 - - -
20. SMIM20 ENSDARG00000112670 423 1.592 - - - 0.747 - 0.845 - - - small integral membrane protein 20 [Source:ZFIN;Acc:ZDB-GENE-131002-2]
21. CRTC2 ENSDARG00000074910 297 1.589 - - - 0.720 - 0.869 - - - CREB regulated transcription coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2214]
22. si:dkey-10p5.7 26 1.583 - 0.768 - - - - 0.815 - - si:dkey-10p5.7
23. rnd1 rnd1 1086 1.582 - 0.730 - - - 0.852 - - -
24. iah1 ENSDARG00000015765 326 1.579 - 0.830 - - - 0.749 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
25. thap4 ENSDARG00000077323 434 1.563 - - - 0.792 - 0.771 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
26. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1.559 - - - 0.816 - 0.743 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
27. CR388046.3 ENSDARG00000105537 108 1.554 - - - 0.801 - - 0.753 - -
28. fancd2 ENSDARG00000053574 247 1.551 - - - 0.738 - 0.813 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
29. ppp2r2ba 321 1.532 - - - 0.725 - 0.807 - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
30. CABZ01065506.1 CABZ01065506.1 204 1.527 - - - - - 0.715 0.812 - -
31. si:dkey-183n20.2 si:dkey-183n20.2 210 1.513 - - - 0.794 - 0.719 - - -
32. si:dkeyp-68b7.10 ENSDARG00000095024 273 1.509 - 0.707 - - - 0.802 - - - si:dkeyp-68b7.10 [Source:ZFIN;Acc:ZDB-GENE-070912-667]
33. sult2st3 ENSDARG00000028367 79 1.5 - 0.789 - - - - 0.711 - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
34. DHX36 ENSDARG00000101059 314 1.475 - - - - - 0.733 0.742 - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
35. ca16b ENSDARG00000060123 389 1.473 - - - - - 0.754 0.719 - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
36. si:ch211-162i8.5 ENSDARG00000111716 76 1.471 0.702 - - - - 0.769 - - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
37. CABZ01038514.1 CABZ01038514.1 724 1.461 - 0.726 - - - 0.735 - - -
38. si:dkeyp-53d3.6 204 1.454 0.749 - - - - 0.705 - - - si:dkeyp-53d3.6, transcript variant X1
39. CACFD1 ENSDARG00000090818 1298 1.452 - - - - - 0.732 0.720 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
40. osbpl5 ENSDARG00000076002 1220 1.442 - 0.715 - 0.727 - - - - - oxysterol binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5872]
41. st6gal2 st6gal2 1570 1.441 - - - 0.709 - 0.732 - - -
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.439 - - - - - 0.737 0.702 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. adam8b ENSDARG00000057644 108 1.439 - 0.705 - - - - 0.734 - - ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
44. stap2a ENSDARG00000092810 591 1.436 - 0.726 - - - 0.710 - - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
45. si:ch211-243j20.2 ENSDARG00000033916 347 1.432 - - - - - 0.723 0.709 - - si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]
46. DTX4 ENSDARG00000076302 2642 1.423 - - - - - 0.721 0.702 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
47. cdt1 ENSDARG00000051854 206 0.936 - 0.936 - - - - - - - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
48. zgc:171566 ENSDARG00000105118 340 0.925 - - - - - 0.925 - - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
49. fam193b ENSDARG00000102831 442 0.917 - 0.917 - - - - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
50. si:ch211-181d7.3 ENSDARG00000068621 87 0.915 0.915 - - - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
51. zgc:63691 zgc:63691 180 0.915 - 0.915 - - - - - - -
52. DENND6A DENND6A 648 0.906 - - - - - 0.906 - - -
53. mknk2b ENSDARG00000015164 2158 0.897 - - - - - 0.897 - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
54. CT867948.2 CT867948.2 131 0.895 - - - - - 0.895 - - -
55. zgc:101129 zgc:101129 641 0.891 - 0.891 - - - - - - -
56. CDA 491 0.891 - - - - - 0.891 - - - cytidine deaminase
57. BSN BSN 463 0.89 - - - - - - 0.890 - -
58. SLC9B1 SLC9B1 137 0.889 - - - - - 0.889 - - -
59. negr1 ENSDARG00000021607 1051 0.887 - 0.887 - - - - - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
60. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 0.886 - - - - - - 0.886 - - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
61. LSM5 ENSDARG00000071573 371 0.886 - - - - - 0.886 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
62. nudt3b ENSDARG00000042123 311 0.886 - - - - - - 0.886 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
63. plekhg7 ENSDARG00000062855 308 0.885 - - - - - - 0.885 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
64. ddx26b 79 0.885 - - - - - - 0.885 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
65. b2m ENSDARG00000053136 215 0.883 - - - - - 0.883 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
66. SB:CB827 SB:CB827 245 0.882 - - - - - 0.882 - - -
67. commd3 ENSDARG00000045402 1601 0.881 - - - - - 0.881 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
68. si:dkeyp-13d11.2 79 0.881 - - - - - - 0.881 - - si:dkeyp-13d11.2
69. ppfia4 ENSDARG00000053205 276 0.88 - - - - - - 0.880 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
70. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 0.878 - - - - - - 0.878 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
71. C4H12orf45 C4H12orf45 483 0.878 - - - - - 0.878 - - -
72. plat ENSDARG00000062707 491 0.878 - - - - - 0.878 - - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
73. dnaja1l dnaja1l 1536 0.878 - - - - - 0.878 - - -
74. ccdc11 ccdc11 79 0.877 - 0.877 - - - - - - -
75. tmem91 ENSDARG00000068456 81 0.877 - - - - - 0.877 - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
76. zgc:113307 ENSDARG00000044894 17 0.876 - - - - - 0.876 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
77. zgc:92218 zgc:92218 64 0.874 - - - - - - 0.874 - -
78. zgc:63568 ENSDARG00000087262 76 0.874 - - - - - - 0.874 - - zgc:63568 [Source:ZFIN;Acc:ZDB-GENE-040426-1165]
79. zdhhc12b ENSDARG00000052787 43 0.871 - - - - - 0.871 - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
80. fabp11a_1 ENSDARG00000017299 387 0.87 - - - - - 0.870 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
81. batf3 ENSDARG00000042577 34 0.869 - - - 0.869 - - - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
82. si:ch1073-357b18.4 ENSDARG00000096602 121 0.868 - - - - - 0.868 - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
83. slc22a2 ENSDARG00000030530 313 0.867 - - - - - 0.867 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
84. GRIK3 ENSDARG00000077715 178 0.867 - - - - - - 0.867 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
85. sec22bb ENSDARG00000100435 33 0.867 - - - 0.867 - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
86. pdcd2l ENSDARG00000002754 417 0.867 - - - - - 0.867 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
87. parp6a ENSDARG00000042703 112 0.864 - - - - - 0.864 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
88. eltd1 eltd1 295 0.864 - - - - - 0.864 - - -
89. CR847906.1 ENSDARG00000099493 88 0.863 - - - - - 0.863 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
90. slc25a21 ENSDARG00000060564 344 0.862 - - - - - 0.862 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
91. lyrm5b ENSDARG00000045827 91 0.862 - 0.862 - - - - - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
92. C9H2orf40 C9H2orf40 212 0.861 - - - 0.861 - - - - -
93. rnmtl1b 116 0.86 - - - 0.860 - - - - - RNA methyltransferase like 1b
94. SNORA57 SNORA57 148 0.859 - - - - - 0.859 - - -
95. rtfdc1 1792 0.858 - - - - - 0.858 - - - replication termination factor 2 domain containing 1, transcript variant X2
96. DSCAML1 ENSDARG00000098057 321 0.856 - - - - - 0.856 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
97. ZCCHC2 ENSDARG00000067950 204 0.856 - - - - - 0.856 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
98. hdr ENSDARG00000004392 351 0.855 - 0.855 - - - - - - - hematopoietic death receptor [Source:ZFIN;Acc:ZDB-GENE-030826-5]
99. b3gat2 ENSDARG00000030733 348 0.855 - - - - - - 0.855 - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
100. plk4 ENSDARG00000004576 688 0.855 - - - - - 0.855 - - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA