Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-170o4.1

Gene Name Gene ID Reads Annotation
si:ch1073-170o4.1 ENSDARG00000092780 18 si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]










Genes with expression patterns similar to si:ch1073-170o4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-170o4.1 ENSDARG00000092780 18 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
2. si:dkey-4i23.7 si:dkey-4i23.7 19 2.809 - 1.000 0.809 - - 1.000 - - -
3. ptger4a ENSDARG00000059236 13 2 - 1.000 - - - 1.000 - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
4. KBTBD11 ENSDARG00000104958 8 2 - 1.000 - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
5. gata1b ENSDARG00000059130 151 1.983 - 1.000 - - 0.983 - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
6. styxl1 ENSDARG00000026338 29 1.921 - - - - - 1.000 - - 0.921 serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
7. TNIP2 ENSDARG00000074501 35 1.917 - 0.917 - - - 1.000 - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
8. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1.902 - 0.902 - - - 1.000 - - -
9. C25H12orf29 C25H12orf29 31 1.869 - 1.000 - - - - - - 0.869
10. AL844567.1_1 AL844567.1_1 34 1.863 - 1.000 - - - - - 0.863 -
11. TNS3_1 TNS3_1 8 1.833 - 1.000 - - - 0.833 - - -
12. CABZ01117437.1 CABZ01117437.1 11 1.829 - 1.000 - - - - - - 0.829
13. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1.828 0.828 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
14. gaa ENSDARG00000090714 19 1.823 - 1.000 - - - 0.823 - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
15. elfn1b ENSDARG00000074372 25 1.784 0.784 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
16. il1rapl1b ENSDARG00000104853 52 1.778 0.778 1.000 - - - - - - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
17. CABZ01057951.1 CABZ01057951.1 10 1.776 0.828 - - - 0.948 - - - -
18. phf19 ENSDARG00000078050 117 1.751 0.828 0.923 - - - - - - - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
19. enpp6 ENSDARG00000040469 187 1.747 0.918 - - - 0.829 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
20. ubxn10 ENSDARG00000052535 24 1.747 - 0.747 - - - 1.000 - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
21. pde6a ENSDARG00000000380 40 1.745 0.828 0.917 - - - - - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
22. DYNC1H1 ENSDARG00000014717 11 1.743 0.743 1.000 - - - - - - - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
23. cyp2k18 ENSDARG00000104593 27 1.735 0.828 - - - - - - - 0.907 cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
24. FP085391.2 FP085391.2 85 1.727 - 1.000 - - - 0.727 - - -
25. EVA1B EVA1B 22 1.721 - 1.000 - - 0.721 - - - -
26. CU459094.1 ENSDARG00000110517 17 1.718 0.718 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
27. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.702 0.828 - - - - - - 0.874 -
28. si:ch211-250n8.1 ENSDARG00000088736 4 1.701 - - - - - 0.843 - 0.858 - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
29. lin9 ENSDARG00000028475 77 1.67 - - 0.737 - - 0.933 - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
30. si:ch211-285c6.3 ENSDARG00000026505 19 1.64 0.828 - - - - 0.812 - - - si:ch211-285c6.3 [Source:ZFIN;Acc:ZDB-GENE-040724-148]
31. si:ch73-96b22.1 si:ch73-96b22.1 393 1.632 0.903 - - - 0.729 - - - -
32. SLC15A5 ENSDARG00000089974 18 1.611 - 0.887 - 0.724 - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
33. chd 56 1.601 0.861 - - - - 0.740 - - - chordin
34. arhgap17b ENSDARG00000062263 55 1.594 - - 0.750 - - 0.844 - - - Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
35. abca4a ENSDARG00000057169 27 1.587 - 0.729 - - - - - 0.858 - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
36. zgc:172139 ENSDARG00000068830 10 1.582 - - - 0.724 - - - 0.858 - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
37. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 1.567 0.724 - - - - 0.843 - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
38. U2_4 U2_4 41 1.564 0.828 - - - - - - 0.736 -
39. trpa1a ENSDARG00000016699 43 1.561 - 0.769 - - - - - - 0.792 transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]
40. si:dkey-91f15.8 18 1.553 0.828 - 0.725 - - - - - - si:dkey-91f15.8, transcript variant X1
41. CABZ01112210.1 CABZ01112210.1 48 1.553 0.722 0.831 - - - - - - -
42. wu:fb63c12 26 1.552 - - - 0.724 - 0.828 - - - wu:fb63c12
43. eif2b5 ENSDARG00000074995 8 1.552 0.828 - - 0.724 - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
44. CDH12_1 CDH12_1 57 1.54 0.828 0.712 - - - - - - -
45. elna 38 1.502 0.718 - - - - - - - 0.784 elastin a, transcript variant X20
46. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
47. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
48. l3mbtl1a ENSDARG00000014828 119 1 - - - - - 1.000 - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
49. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
50. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
51. fxyd6 ENSDARG00000100971 51 1 - - - - - 1.000 - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
52. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
53. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
54. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
55. gpr155a ENSDARG00000090804 27 1 - - - - - 1.000 - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
56. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
57. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
58. fam178a fam178a 29 1 - - - - - 1.000 - - -
59. si:ch73-236c18.7 ENSDARG00000098706 6 1 - - - - - 1.000 - - - si:ch73-236c18.7 [Source:ZFIN;Acc:ZDB-GENE-121214-3]
60. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
61. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
62. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
63. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
64. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
65. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
66. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
67. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
68. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
69. CU694952.2 CU694952.2 3 1 - 1.000 - - - - - - -
70. CR847844.2 ENSDARG00000102680 1 1 - - - - - 1.000 - - -
71. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
72. polr2b ENSDARG00000098783 90 1 - - - - - 1.000 - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
73. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
74. scara3 ENSDARG00000008060 169 1 - 1.000 - - - - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
75. si:dkey-105h11.2 13 1 - - - - - 1.000 - - - si:dkey-105h11.2
76. rcv1 rcv1 77 1 - 1.000 - - - - - - -
77. zgc:66432 zgc:66432 16 1 - - - - - 1.000 - - -
78. ctskl ctskl 17 1 - 1.000 - - - - - - -
79. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
80. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
81. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
82. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - - - 1.000 - - -
83. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
84. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
85. ZNF337_14 ZNF337_14 4 1 - - - - - 1.000 - - -
86. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
87. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
88. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
89. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
90. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
91. PNPLA2 ENSDARG00000089390 0 1 - 1.000 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
92. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
93. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
94. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
95. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - 1.000 - - -
96. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
97. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
98. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
99. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
100. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -

There are 1095 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA