Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sema3aa

Gene Name Gene ID Reads Annotation
sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]










Genes with expression patterns similar to sema3aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
2. plch1 ENSDARG00000079253 1216 2.542 0.718 0.868 - - - - - - 0.956 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
3. pa2g4b ENSDARG00000070657 7999 2.203 - 0.764 - - - 0.722 0.717 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
4. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.865 - 0.919 - - - - - - 0.946 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
5. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.778 - 0.839 - - - - - - 0.939 GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
6. alpk3a ENSDARG00000078989 1992 1.759 - 0.884 - - - - - - 0.875 alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
7. zgc:113363 ENSDARG00000101206 474 1.738 - 0.794 - - - - - - 0.944 zgc:113363 [Source:ZFIN;Acc:ZDB-GENE-050327-7]
8. sipa1l1 ENSDARG00000020134 565 1.708 - 0.766 - - - - - - 0.942 signal-induced proliferation-associated 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9909]
9. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.693 - - - - - - 0.744 - 0.949 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
10. FILIP1 339 1.679 0.835 0.844 - - - - - - - filamin A interacting protein 1
11. cuedc1b ENSDARG00000054748 1638 1.678 - - - - - - 0.720 - 0.958 CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
12. per1b ENSDARG00000012499 320 1.675 - 0.712 - - - - - - 0.963 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
13. stxbp3 ENSDARG00000008142 2604 1.67 - - - - - - 0.714 - 0.956 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
14. tp53i11b ENSDARG00000006025 569 1.668 0.708 - - - - - - - 0.960 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
15. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.668 - - - - - 0.700 - - 0.968 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
16. lrrc20 ENSDARG00000105018 1970 1.666 - 0.832 - - - - - - 0.834 leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
17. cspg4 ENSDARG00000078227 1084 1.65 - 0.780 - - - - - - 0.870 chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
18. polr3a ENSDARG00000102569 1072 1.646 - 0.706 - - - - - - 0.940 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
19. PAQR4 PAQR4 2150 1.637 - 0.744 - - - - - - 0.893
20. abcg2c ENSDARG00000058574 1261 1.637 - 0.705 - - - - - - 0.932 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
21. mycb ENSDARG00000007241 3988 1.63 0.732 - - - - - - - 0.898 MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
22. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.627 - 0.714 - - - - - - 0.913 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
23. arvcfb ENSDARG00000061688 2388 1.624 - 0.801 - - - - - - 0.823 ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
24. mrpl9 ENSDARG00000063249 783 1.605 0.700 0.905 - - - - - - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
25. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.601 - 0.751 - - - - - - 0.850 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
26. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.598 - - - - - 0.785 0.813 - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
27. idh3a ENSDARG00000030278 2983 1.588 - - - - - - 0.703 - 0.885 isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
28. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 1.585 - 0.734 - - - - - - 0.851 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
29. chst11 ENSDARG00000034375 2701 1.574 0.720 - - - - - - - 0.854 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
30. nt5dc3 ENSDARG00000062949 816 1.568 - 0.716 - - - - - - 0.852 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
31. lamb2 ENSDARG00000002084 3265 1.566 0.779 0.787 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
32. AKAP2 AKAP2 4178 1.557 0.726 - - - - - - - 0.831
33. tnnt2d ENSDARG00000002988 7590 1.547 0.764 0.783 - - - - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
34. col27a1a 1747 1.541 - 0.743 - - - - - - 0.798 collagen, type XXVII, alpha 1a
35. col11a1b ENSDARG00000009014 9998 1.539 - 0.834 - - - 0.705 - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
36. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.535 - - - - - - 0.770 - 0.765 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
37. u2af1 ENSDARG00000015325 3217 1.534 - 0.810 - - - 0.724 - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
38. nop56 ENSDARG00000012820 15231 1.533 0.730 0.803 - - - - - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
39. CABZ01092303.1 CABZ01092303.1 8825 1.532 - - - - - - 0.714 - 0.818
40. mrpl12 ENSDARG00000038768 5539 1.532 0.714 0.818 - - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
41. tcp11l2 ENSDARG00000027316 1906 1.531 - - - - - - 0.753 - 0.778 t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
42. eftud2 ENSDARG00000012261 3081 1.528 - 0.818 - - - 0.710 - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
43. dnajc11 1939 1.526 - 0.785 - - - 0.741 - - - DnaJ heat shock protein family (Hsp40) member C11
44. txn2 ENSDARG00000034777 4071 1.525 - 0.777 - - - - 0.748 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
45. zgc:153662 zgc:153662 4604 1.525 0.702 0.823 - - - - - - -
46. ppp2r1b ppp2r1b 3469 1.525 - - - - - - 0.743 - 0.782
47. abi1b ENSDARG00000062991 1564 1.522 - 0.705 - - - - - - 0.817 abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
48. C1H10orf12 C1H10orf12 1663 1.521 - 0.820 - - - - - - 0.701
49. phf5a ENSDARG00000045155, ENSDARG00000114593 1365 1.519 - 0.719 - - - - - - 0.800 PHD finger protein 5A [Source:ZFIN;Acc:ZDB-GENE-021219-3]
50. dpp9 ENSDARG00000052606 2279 1.518 - 0.796 - - - 0.722 - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
51. ck2a1 ck2a1 3749 1.514 - 0.715 - - - - 0.799 - -
52. hdgfrp2 7462 1.509 - 0.797 - - - 0.712 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
53. pfkpa ENSDARG00000028000 1206 1.506 0.802 - - - - - 0.704 - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
54. dnajc15 ENSDARG00000038309 1274 1.498 0.744 0.754 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
55. dnajc19 ENSDARG00000044420 1756 1.496 - 0.744 - - - - 0.752 - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
56. dlg1 ENSDARG00000009677 706 1.495 - - - - - 0.754 0.741 - - discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
57. ube2g1b ENSDARG00000069527 5376 1.489 - 0.728 - - - - - - 0.761 ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
58. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.487 - - - - - - 0.712 - 0.775 heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
59. nop58 ENSDARG00000104353 8497 1.486 0.770 0.716 - - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
60. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.481 - - - - - - 0.775 - 0.706 VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
61. znf592 ENSDARG00000060885 776 1.48 - 0.755 - - - - 0.725 - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
62. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.476 - 0.748 - - - - 0.728 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
63. rprd1b ENSDARG00000038113 1105 1.474 - 0.703 - - - - 0.771 - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
64. surf4 ENSDARG00000104647 4203 1.469 - 0.769 - - - - 0.700 - - surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
65. eif3m ENSDARG00000013931 8117 1.469 - 0.703 - - - - 0.766 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
66. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.464 - 0.728 - - - - 0.736 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
67. ube2d3 ENSDARG00000038473 4096 1.461 - - - - - 0.758 0.703 - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
68. mrpl15 ENSDARG00000101306 2796 1.452 - 0.704 - - - 0.748 - - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
69. slc25a12 ENSDARG00000102362 2773 1.452 - 0.707 - - - - - - 0.745 solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
70. flot2a ENSDARG00000004830 5276 1.442 - - - - - 0.731 0.711 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
71. pgam5 ENSDARG00000035608 4044 1.438 - - - - - 0.701 - - 0.737 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
72. prmt3 ENSDARG00000019791 268 1.436 0.707 0.729 - - - - - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
73. esd ENSDARG00000019496 3192 1.435 - - - - - 0.710 - - 0.725 esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
74. tbl3 ENSDARG00000052344 1530 1.433 0.726 0.707 - - - - - - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
75. CABZ01062780.1 CABZ01062780.1 250 1.43 0.703 0.727 - - - - - - -
76. nfu1 ENSDARG00000068125 1743 0.972 - - - - - - - - 0.972 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
77. casp2 ENSDARG00000062052 559 0.969 - - - - - - - - 0.969 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
78. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.969 - - - - - - - - 0.969 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
79. EMP3 EMP3 523 0.969 - - - - - - - - 0.969
80. rnf165a ENSDARG00000077906 133 0.968 - - - - - - - - 0.968 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
81. FAM83H FAM83H 190 0.967 - - - - - - - - 0.967
82. CABZ01008011.1 CABZ01008011.1 761 0.967 - - - - - - - - 0.967
83. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.967 - - - - - - - - 0.967 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
84. asb13b ENSDARG00000089833 251 0.966 - - - - - - - - 0.966 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
85. GRAMD2 GRAMD2 300 0.966 - - - - - - - - 0.966
86. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.966 - - - - - - - - 0.966 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
87. ubap2l ENSDARG00000063219 1147 0.965 - - - - - - - - 0.965 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
88. CT030712.1 ENSDARG00000044355 83 0.965 - - - - - - - - 0.965 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
89. myo18ab ENSDARG00000061862 124 0.965 - - - - - - - - 0.965 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
90. CR388047.3 ENSDARG00000117023 89 0.965 - - - - - - - - 0.965
91. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.964 - - - - - - - - 0.964 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
92. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.964 - - - - - - - - 0.964 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
93. ACBD3 ENSDARG00000042623 159 0.964 - - - - - - - - 0.964 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
94. ERAP1_1 ERAP1_1 64 0.964 - - - - - - - - 0.964
95. si:ch211-129c21.1 ENSDARG00000024775 371 0.964 - - - - - - - - 0.964 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
96. enpp6 ENSDARG00000040469 187 0.964 - - - - - - - - 0.964 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
97. zgc:112263 zgc:112263 473 0.964 - - - - - - - - 0.964
98. trim33l ENSDARG00000086126 241 0.964 - - - - - - - - 0.964 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
99. CABZ01063402.1 CABZ01063402.1 64 0.963 - - - - - - - - 0.963
100. mlx ENSDARG00000037891 433 0.963 - - - - - - - - 0.963 MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]

There are 1381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA