Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sec13

Gene Name Gene ID Reads Annotation
sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]










Genes with expression patterns similar to sec13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
2. cercam ENSDARG00000079049, ENSDARG00000109573 2228 2.485 - 0.884 0.901 - - - - 0.700 - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
3. tead3a ENSDARG00000074321 2240 2.315 - 0.739 0.790 - - - - 0.786 - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
4. rnf114 ENSDARG00000009886 725 1.875 - - 0.915 - - - - 0.960 - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
5. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.828 - - 0.953 - - - - 0.875 - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
6. RBMS1 RBMS1 258 1.826 - 0.892 - - - - - 0.934 -
7. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.82 - 0.876 0.944 - - - - - -
8. FBLN1 ENSDARG00000103311 877 1.818 - - 0.951 - - - - 0.867 - fibulin 1 [Source:NCBI gene;Acc:30240]
9. CU855890.3 CU855890.3 307 1.785 - - 0.935 - - - - 0.850 -
10. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 1.78 - 0.894 - - - - - 0.886 - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
11. ormdl2 ENSDARG00000058022 1146 1.77 - 0.932 - - - - - 0.838 - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
12. map7d1b ENSDARG00000104701 1655 1.718 - 0.955 0.763 - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
13. sar1b ENSDARG00000103403 1699 1.71 - - 0.798 - - - - 0.912 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
14. CU929394.1 CU929394.1 405 1.709 - - 0.933 - - 0.776 - - -
15. ing5a ENSDARG00000022413 268 1.699 - - - - 0.759 - - 0.940 - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
16. nubp2 ENSDARG00000055653 803 1.685 - 0.895 - - - - - 0.790 - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
17. klf2b ENSDARG00000040432 1730 1.685 - 0.825 0.860 - - - - - - Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
18. gna13a ENSDARG00000073765 925 1.682 0.828 0.854 - - - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
19. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 1.68 0.728 - 0.952 - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
20. sptssa ENSDARG00000071203 2306 1.675 - 0.860 - - - - - 0.815 - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
21. mmp14a ENSDARG00000002235 911 1.672 - - 0.912 - - - - 0.760 - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
22. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.667 - 0.769 0.898 - - - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
23. mxra5b ENSDARG00000076309 190 1.661 - - 0.960 - - 0.701 - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
24. slc30a1a ENSDARG00000005463 1011 1.66 - 0.729 0.931 - - - - - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
25. si:dkeyp-104f11.9 ENSDARG00000096715 81 1.651 - - - - - 0.701 - 0.950 - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
26. rab11al ENSDARG00000014340 2116 1.643 - 0.902 0.741 - - - - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
27. kxd1 ENSDARG00000051934 828 1.641 - - - - - 0.756 - 0.885 - KxDL motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-207]
28. cc2d1b ENSDARG00000099445 253 1.641 - - - - - 0.760 - 0.881 - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
29. ZFYVE1 ENSDARG00000078652 631 1.64 - 0.893 - - - - - 0.747 - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
30. tbl1xr1b ENSDARG00000008966 2203 1.634 - 0.875 0.759 - - - - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
31. tmem150a tmem150a 543 1.633 0.712 0.921 - - - - - - -
32. IKBIP IKBIP 308 1.633 - - 0.895 - - 0.738 - - -
33. cdc23 ENSDARG00000044484 767 1.631 - - 0.877 - - - 0.754 - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
34. exoc3l4 ENSDARG00000058180 923 1.629 - 0.912 - - - - 0.717 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
35. spsb4b ENSDARG00000040538 372 1.616 - 0.819 - - - - - 0.797 - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
36. gys2 ENSDARG00000004904 212 1.602 - 0.840 - - - 0.762 - - - glycogen synthase 2 [Source:ZFIN;Acc:ZDB-GENE-030826-31]
37. gbgt1l4 ENSDARG00000068503 1009 1.599 - 0.757 - - - - - 0.842 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
38. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.599 - 0.876 - - - - 0.723 - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
39. dram2b ENSDARG00000044241 503 1.59 - 0.821 - - - - - 0.769 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
40. suco ENSDARG00000016532 1609 1.584 - 0.729 0.855 - - - - - - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
41. elovl1a ENSDARG00000099960 1650 1.572 - 0.713 - - - - - 0.859 - ELOVL fatty acid elongase 1a [Source:ZFIN;Acc:ZDB-GENE-041010-66]
42. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.558 - 0.848 - - - 0.710 - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
43. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 1.553 - 0.801 - - - - - 0.752 - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
44. IKZF2 ENSDARG00000069111 1366 1.549 0.702 0.847 - - - - - - - IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
45. mpzl1l ENSDARG00000059048 571 1.546 - - - - - - 0.708 0.838 - myelin protein zero-like 1 like [Source:ZFIN;Acc:ZDB-GENE-050417-455]
46. hnrnpa1 hnrnpa1 1302 1.545 - 0.827 - - - - 0.718 - -
47. aldh18a1 ENSDARG00000099579 2185 1.542 - 0.743 - - - - - 0.799 - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
48. stk38a ENSDARG00000019973 1343 1.535 - 0.767 - - - - - 0.768 - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
49. si:dkey-102c8.3 ENSDARG00000113572 4779 1.521 0.727 - - - - - - 0.794 - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
50. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 1.518 - 0.769 - - - - - 0.749 - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
51. gng7 ENSDARG00000038693 540 1.476 - - - - - - 0.734 0.742 - guanine nucleotide binding protein (G protein), gamma 7 [Source:ZFIN;Acc:ZDB-GENE-040718-93]
52. SEC16B ENSDARG00000099554 411 0.978 - 0.978 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
53. pddc1 pddc1 257 0.977 - 0.977 - - - - - - -
54. stap2b ENSDARG00000043281 174 0.97 - - - - - - - 0.970 - signal transducing adaptor family member 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2540]
55. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.969 - - 0.969 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
56. mfsd11 ENSDARG00000102828 1043 0.969 - 0.969 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
57. CABZ01073174.1 CABZ01073174.1 581 0.967 - - 0.967 - - - - - -
58. wdr66 ENSDARG00000059855 276 0.965 - - 0.965 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
59. F8A3 F8A3 646 0.964 - - 0.964 - - - - - -
60. wnt5b ENSDARG00000102464 1662 0.964 - - 0.964 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
61. alg6 ENSDARG00000017617 483 0.963 - - 0.963 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
62. CAPN2 CAPN2 1497 0.963 - - - - - - - 0.963 -
63. zgc:113377 335 0.963 - - 0.963 - - - - - - zgc:113377, transcript variant X2
64. GPSM3 GPSM3 257 0.962 - - 0.962 - - - - - -
65. map3k10 ENSDARG00000055672 284 0.962 - - 0.962 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
66. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 0.962 - - - - - - - 0.962 - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
67. mphosph10 ENSDARG00000012495 1679 0.962 - - 0.962 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
68. brf1a ENSDARG00000017835 206 0.961 - - 0.961 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
69. CMTM8 CMTM8 71 0.961 - - 0.961 - - - - - -
70. zgc:158260 ENSDARG00000101703 103 0.961 - - 0.961 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
71. pcdh8 ENSDARG00000006467 317 0.961 - - 0.961 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
72. slc35c1 ENSDARG00000104669 65 0.961 - - 0.961 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
73. CR942805.1 CR942805.1 94 0.961 - - 0.961 - - - - - -
74. kcnj1a.4 ENSDARG00000090635 356 0.961 - 0.961 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
75. CABZ01113061.1 CABZ01113061.1 51 0.961 - - 0.961 - - - - - -
76. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.961 - - 0.961 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
77. msgn1 ENSDARG00000070546 188 0.961 - - 0.961 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
78. RNase_MRP RNase_MRP 118 0.961 - - 0.961 - - - - - -
79. il2rb ENSDARG00000075720 116 0.96 - - 0.960 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
80. DACT3 DACT3 766 0.96 - - 0.960 - - - - - -
81. pex16 ENSDARG00000058202 486 0.96 - 0.960 - - - - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
82. CYP27A1_1 CYP27A1_1 329 0.96 - - 0.960 - - - - - -
83. inpp5e ENSDARG00000103926 567 0.959 - - 0.959 - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
84. BX649554.3_1 BX649554.3_1 1071 0.959 - - 0.959 - - - - - -
85. ndst2b ENSDARG00000060678 453 0.959 - - 0.959 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
86. TATDN3 ENSDARG00000044072 914 0.958 - - 0.958 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
87. TMEM230 TMEM230 351 0.958 - - - - - - - 0.958 -
88. BX908759.1 BX908759.1 52 0.957 - - - - - - - 0.957 -
89. si:ch211-89o5.1 si:ch211-89o5.1 91 0.957 - 0.957 - - - - - - -
90. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.957 - 0.957 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
91. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 0.957 - - 0.957 - - - - - - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
92. tlr18 ENSDARG00000040249 45 0.957 - - - - - - - 0.957 - toll-like receptor 18 [Source:ZFIN;Acc:ZDB-GENE-040220-2]
93. CU571255.1 CU571255.1 902 0.957 - - 0.957 - - - - - -
94. TRIM14_6 TRIM14_6 342 0.956 - - 0.956 - - - - - -
95. SCYL1 ENSDARG00000079854 78 0.956 - - - - - - - 0.956 - SCY1-like, kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8915]
96. npffr2.1 npffr2.1 60 0.956 - - - - - - - 0.956 -
97. CU367845.1_1 CU367845.1_1 43 0.956 - - - - - - - 0.956 -
98. sp7 ENSDARG00000019516 266 0.956 - - - - - - - 0.956 - Sp7 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040629-2]
99. CABZ01049802.1 CABZ01049802.1 195 0.956 - - - - - - - 0.956 -
100. rapgef1a ENSDARG00000043593 416 0.956 - - 0.956 - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]

There are 1214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA