Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sdccag3

Gene Name Gene ID Reads Annotation
sdccag3 239 serologically defined colon cancer antigen 3, transcript variant X2










Genes with expression patterns similar to sdccag3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdccag3 239 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serologically defined colon cancer antigen 3, transcript variant X2
2. CR848836.6 CR848836.6 93 2.54 0.871 0.781 - - - - 0.888 - -
3. si:ch211-152l15.4 si:ch211-152l15.4 13 1.902 1.000 - - - - - 0.902 - -
4. cntn5 ENSDARG00000021584 30 1.902 1.000 - - - - - 0.902 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
5. CABZ01044346.1 CABZ01044346.1 12 1.902 1.000 - - - - - 0.902 - -
6. CIR1 ENSDARG00000099733 66 1.887 1.000 - - - - 0.887 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
7. si:dkey-208k4.1 si:dkey-208k4.1 15 1.884 1.000 0.884 - - - - - - -
8. syt9b ENSDARG00000029239 31 1.855 0.905 - - - - - 0.950 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
9. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1.804 1.000 0.804 - - - - - - -
10. CABZ01072083.1 CABZ01072083.1 56 1.801 - - - - - 0.899 0.902 - -
11. si:ch73-196i15.3 ENSDARG00000094281 1005 1.798 - 0.902 - - - - 0.896 - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
12. rhoab ENSDARG00000094673 26 1.791 0.905 - - - - 0.886 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
13. FP085391.2 FP085391.2 85 1.781 1.000 0.781 - - - - - - -
14. mlc1 ENSDARG00000063026 29 1.781 1.000 0.781 - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
15. CU694319.1 CU694319.1 72 1.781 1.000 0.781 - - - - - - -
16. pcgf5b ENSDARG00000052388 163 1.762 0.871 - - - - 0.891 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
17. si:ch211-120c15.3 ENSDARG00000101807 19 1.697 0.916 0.781 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
18. gria4a ENSDARG00000037496 88 1.695 0.914 0.781 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
19. slc6a13 369 1.692 - - - - - 0.780 0.912 - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
20. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1.683 - 0.781 - - - - 0.902 - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
21. USH1G USH1G 25 1.683 - 0.781 - - - - 0.902 - -
22. dync2i1 dync2i1 83 1.676 0.823 0.853 - - - - - - -
23. FNBP1 FNBP1 441 1.67 0.868 - - - - 0.802 - - -
24. CR759816.1 ENSDARG00000098977 27 1.668 - 0.781 - - - 0.887 - - -
25. mkks ENSDARG00000016139 70 1.652 0.871 0.781 - - - - - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
26. trim35-27 ENSDARG00000035009 62 1.644 - 0.781 - - - - 0.863 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
27. CABZ01088365.1 CABZ01088365.1 66 1.634 - 0.781 - - - - 0.853 - -
28. limk1a ENSDARG00000103467 97 1.629 0.798 0.831 - - - - - - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
29. si:dkey-20l4.2 si:dkey-20l4.2 110 1.625 0.723 - - - - - 0.902 - -
30. tmem53 ENSDARG00000038789 411 1.624 - 0.732 - - - 0.892 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
31. CDH12_1 CDH12_1 57 1.623 - 0.718 - - - - 0.905 - -
32. rab42a ENSDARG00000034215 692 1.621 - 0.718 - - - - 0.903 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
33. NLRC5 ENSDARG00000024631 11 1.619 0.838 0.781 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
34. ncam2 ENSDARG00000017466 175 1.604 0.823 0.781 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
35. polg ENSDARG00000060951 33 1.604 0.823 0.781 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
36. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 1.604 - - - - - 0.890 0.714 - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
37. lrrn3 lrrn3 137 1.596 0.815 0.781 - - - - - - -
38. MYOF ENSDARG00000006112 436 1.593 0.729 - - - - 0.864 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
39. CT027762.3 CT027762.3 17 1.589 0.871 0.718 - - - - - - -
40. zdhhc9 ENSDARG00000060515 981 1.582 - - - - - 0.854 0.728 - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
41. gpr143 ENSDARG00000034572 559 1.579 0.770 - - - - 0.809 - - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
42. wfdc2 ENSDARG00000089187 653 1.579 - 0.788 - - - 0.791 - - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
43. pars2 ENSDARG00000044404, ENSDARG00000109425 271 1.57 0.754 0.816 - - - - - - - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
44. c1ql3b ENSDARG00000028521, ENSDARG00000036483 40 1.554 - 0.718 - - - - 0.836 - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
45. GRB7 ENSDARG00000042726 100 1.545 - - - - - 0.835 0.710 - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
46. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1.507 - 0.781 - - - - 0.726 - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
47. CU928220.1 CU928220.1 146 1.504 0.723 0.781 - - - - - - -
48. vax2 ENSDARG00000058702 175 1.496 - 0.781 - - - - 0.715 - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
49. stim1b ENSDARG00000061560 146 1.477 0.760 - - - - - 0.717 - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
50. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 1.464 0.723 - - - - - 0.741 - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
51. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
52. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
53. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
54. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
55. DSEL DSEL 1 1 1.000 - - - - - - - -
56. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
57. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
58. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
59. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
60. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
61. map3k8 ENSDARG00000061710 76 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
62. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
63. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
64. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
65. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
66. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
67. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
68. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
69. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
70. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
71. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
72. C18H15orf61 C18H15orf61 104 1 1.000 - - - - - - - -
73. cyp2aa2 ENSDARG00000104811 77 1 1.000 - - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
74. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
75. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
76. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
77. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
78. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
79. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
80. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
81. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
82. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
83. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
84. ftr42 4 1 1.000 - - - - - - - - finTRIM family, member 42
85. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
86. bcl11aa ENSDARG00000061352 61 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
87. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
88. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
89. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
90. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 1.000 - - - - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
91. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
92. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
93. nmrk1 ENSDARG00000037913 18 1 1.000 - - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
94. CR936540.2 CR936540.2 4 1 1.000 - - - - - - - -
95. msxa msxa 263 1 1.000 - - - - - - - -
96. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
97. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
98. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
99. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
100. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA