Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sdc2

Gene Name Gene ID Reads Annotation
sdc2 ENSDARG00000002731 6607 syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]










Genes with expression patterns similar to sdc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sdc2 ENSDARG00000002731 6607 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
2. ACTN4_1 ACTN4_1 8550 3.193 - 0.822 - - 0.781 0.764 0.826 - -
3. PRODH_1 PRODH_1 3400 2.751 - 0.974 - - 0.895 - 0.882 - -
4. tpd52l2b ENSDARG00000013655 9460 2.493 0.765 - - - - 0.784 0.944 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
5. calr ENSDARG00000076290 13987 2.475 - 0.956 - - - 0.763 0.756 - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
6. urah urah 4152 2.426 0.861 - 0.707 - - - 0.858 - -
7. aldh6a1 ENSDARG00000053485 7744 2.318 - - - - 0.826 0.731 - - 0.761 aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
8. srsf2a ENSDARG00000057484 25721 1.878 - 0.976 - - - - 0.902 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
9. cdk16_1 ENSDARG00000032072 2031 1.874 - 0.973 - - - - 0.901 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
10. mettl16 ENSDARG00000055838 818 1.856 - 0.972 - - 0.884 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
11. uba5 ENSDARG00000063588 1260 1.846 - 0.971 - - - - 0.875 - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
12. frem1a ENSDARG00000069473 1847 1.802 - 0.972 - - - - 0.830 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
13. ef1 1343 1.797 0.897 - - - - - 0.900 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
14. WDR83OS ENSDARG00000025554 7117 1.796 - 0.981 - - 0.815 - - - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
15. eif2ak3 ENSDARG00000062139 3276 1.794 0.879 - - - - - 0.915 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
16. mrpl27 ENSDARG00000032985 2158 1.772 - - - - 0.867 - 0.905 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
17. fa2h ENSDARG00000090063 1084 1.768 0.885 - - - - - 0.883 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
18. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.763 - - - - 0.865 - 0.898 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
19. zgc:111974 zgc:111974 1386 1.756 0.878 - - - 0.878 - - - -
20. zgc:161969 ENSDARG00000041359 898 1.748 - - - - 0.856 - 0.892 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
21. col6a1 ENSDARG00000074908 2339 1.746 - - - - - 0.811 0.935 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
22. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1.746 - - - - 0.881 - 0.865 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
23. fam129ba ENSDARG00000062970 1578 1.745 0.870 - - - 0.875 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
24. wu:fc34e06 1793 1.741 0.849 - - - - - 0.892 - - wu:fc34e06, transcript variant X10
25. acsf2 ENSDARG00000061201 4413 1.738 0.805 - - - - - 0.933 - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
26. mrpl12 ENSDARG00000038768 5539 1.737 - - - - 0.838 - 0.899 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
27. etfa ENSDARG00000101631 2946 1.737 0.823 - - - - - 0.914 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
28. cdkn2aipnl ENSDARG00000053395 5107 1.736 - - - - 0.823 - 0.913 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
29. kdm4b ENSDARG00000099675 2037 1.731 0.825 - - - - - 0.906 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
30. ccne2 ENSDARG00000098529 4695 1.729 0.751 0.978 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
31. ppp1cb ENSDARG00000044153 4748 1.727 - - - - 0.875 - 0.852 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
32. mcl1a ENSDARG00000009779 2058 1.725 0.809 - - - - - 0.916 - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
33. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.725 - 0.973 - - 0.752 - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
34. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.717 0.810 - - - - - 0.907 - - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
35. flot1b ENSDARG00000037998 13600 1.716 - - - - - 0.792 0.924 - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
36. tmem9b ENSDARG00000025693 2693 1.716 - 0.949 - - - 0.767 - - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
37. lzic ENSDARG00000055899 638 1.715 0.838 - - - - - 0.877 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
38. slc2a2 ENSDARG00000056196 2061 1.713 0.836 - - - - - 0.877 - - solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
39. chst11 ENSDARG00000034375 2701 1.712 - - - - 0.851 - 0.861 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
40. arf1l arf1l 9119 1.71 0.810 0.900 - - - - - - -
41. DYNC1I2 DYNC1I2 4131 1.698 - - - - - 0.787 0.911 - -
42. acsl5 ENSDARG00000075931 880 1.693 0.838 - - - - - 0.855 - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
43. ACVR1B ACVR1B 4824 1.69 - 0.973 - - - 0.717 - - -
44. inppl1a ENSDARG00000104222 6256 1.69 0.756 - - - - - 0.934 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
45. gpcpd1 ENSDARG00000016011 2563 1.689 0.810 - - - - - 0.879 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
46. slc11a2 ENSDARG00000024295 3197 1.689 - - - - - 0.770 0.919 - - solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-021115-1]
47. ak2 ENSDARG00000005926 7598 1.688 - - - - 0.755 - 0.933 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
48. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.688 0.833 - - - - - 0.855 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
49. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.675 - - - - 0.786 - 0.889 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
50. gstal gstal 1865 1.673 0.746 - - - - - 0.927 - -
51. gltscr2 gltscr2 5763 1.669 - - - - - 0.762 0.907 - -
52. arrb2b ENSDARG00000011545 3126 1.669 - - - - 0.876 0.793 - - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
53. mpdu1b ENSDARG00000040265 1968 1.666 0.768 - - - - - 0.898 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
54. arhgef1b ENSDARG00000055837 2330 1.661 - - - - 0.889 0.772 - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
55. CASKIN2_1 CASKIN2_1 2299 1.658 0.774 - - - 0.884 - - - -
56. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.656 0.786 - - - 0.870 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
57. cndp2 ENSDARG00000003931 1177 1.655 0.771 - - - - - 0.884 - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
58. fermt1 ENSDARG00000052652 2394 1.645 0.755 - - - - - 0.890 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
59. abl1 ENSDARG00000035187 3553 1.642 - - - - - 0.737 0.905 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
60. RAMP1 RAMP1 736 1.638 - - - - - 0.717 0.921 - -
61. tmem176l.1 ENSDARG00000099491 860 1.637 - - - - 0.875 0.762 - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
62. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.635 0.756 - - - - - 0.879 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
63. CABZ01081490.1 ENSDARG00000111653 11892 1.633 - - - - - 0.787 0.846 - -
64. calrl calrl 16799 1.632 - - - - - 0.853 0.779 - -
65. celsr1a ENSDARG00000069185 1894 1.631 - - - - - 0.702 0.929 - - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
66. arl1 ENSDARG00000101680 5973 1.628 0.782 - - - - - 0.846 - - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
67. NDUFA3 ENSDARG00000041400 7939 1.619 - - - - - 0.719 0.900 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
68. g6pca.2 ENSDARG00000013721 2034 1.618 0.716 - - - 0.902 - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
69. unc5b ENSDARG00000033327 3432 1.618 - - - - 0.849 - 0.769 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
70. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.616 - 0.834 - - - 0.782 - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
71. tcea1 ENSDARG00000003531 2912 1.61 0.770 - - - 0.840 - - - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
72. gmfb ENSDARG00000028327 6522 1.608 0.883 - - - - 0.725 - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
73. ppifb ENSDARG00000052842 3533 1.607 0.823 - - - - - 0.784 - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
74. lmnb2 ENSDARG00000101624 11304 1.605 - - - - 0.775 - 0.830 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
75. lcat ENSDARG00000099424 357 1.602 0.884 - - - - 0.718 - - - lecithin-cholesterol acyltransferase [Source:ZFIN;Acc:ZDB-GENE-010716-3]
76. zgc:162356 zgc:162356 5115 1.601 - - - - 0.717 - 0.884 - -
77. clpxb ENSDARG00000067796 1918 1.6 0.846 - - - - 0.754 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
78. tmod2 ENSDARG00000002571 5119 1.6 - - - - - 0.721 0.879 - - tropomodulin 2 [Source:ZFIN;Acc:ZDB-GENE-040912-185]
79. sdprb sdprb 13647 1.594 - - - - 0.859 0.735 - - -
80. CPEB4 CPEB4 3249 1.593 0.704 - - - 0.889 - - - -
81. col14a1a ENSDARG00000005762 4778 1.593 - - - - 0.714 - 0.879 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
82. kdelr2a ENSDARG00000005254 13871 1.593 0.752 - - - - - 0.841 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
83. aldh18a1 ENSDARG00000099579 2185 1.59 - - - - 0.869 0.721 - - - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
84. chchd1 ENSDARG00000029100 2121 1.588 - - - - - 0.701 0.887 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
85. WDR1 ENSDARG00000114022 7532 1.588 - 0.879 - - - 0.709 - - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
86. sec23b ENSDARG00000019360 6210 1.584 0.858 - 0.726 - - - - - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
87. tbca ENSDARG00000016754 6427 1.583 0.793 - - - - 0.790 - - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
88. ivns1abpa ENSDARG00000031100 3806 1.583 - - - - - 0.731 0.852 - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
89. dspa ENSDARG00000022309 7434 1.579 0.821 - - - - - 0.758 - - desmoplakin a [Source:ZFIN;Acc:ZDB-GENE-030131-2743]
90. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 1.575 0.837 - - - - - 0.738 - - regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
91. golga7 ENSDARG00000057676 4691 1.569 0.750 - - - 0.819 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
92. mpp1 ENSDARG00000105287 1359 1.564 0.813 - - - - 0.751 - - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
93. CABZ01092303.1 CABZ01092303.1 8825 1.556 0.777 - - - - 0.779 - - -
94. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.53 0.829 - - - - 0.701 - - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
95. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.515 0.717 - - - - - 0.798 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
96. slc26a5 ENSDARG00000022424 976 1.506 0.805 - - - - 0.701 - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
97. CBFA2T3 ENSDARG00000079012 6799 1.482 0.740 - - - 0.742 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
98. tecrb ENSDARG00000025904 4612 1.46 - - - - - 0.706 0.754 - - trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
99. met ENSDARG00000070903 2088 1.458 0.715 - - - - 0.743 - - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
100. EIF4G1 EIF4G1 19676 1.452 - 0.723 - - - 0.729 - - -

There are 1278 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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