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Results for scn1lab

Gene Name Gene ID Reads Annotation
scn1lab ENSDARG00000062744 155 sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]










Genes with expression patterns similar to scn1lab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn1lab ENSDARG00000062744 155 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
2. KCNIP4 ENSDARG00000088100 86 3.542 0.928 0.731 - - - 0.893 0.990 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
3. bsk146 ENSDARG00000099069 274 3.242 0.731 0.731 - - - 0.870 0.910 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
4. nrsn1 ENSDARG00000111235 123 3.175 0.873 - - - - 0.839 0.753 0.710 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
5. CU928222.1 ENSDARG00000097436 1662 3.116 0.701 0.779 - - - 0.730 0.906 - -
6. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.771 - 0.884 - - - 0.949 0.938 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
7. CLIP3 ENSDARG00000054456 734 2.715 - 0.842 - - - 0.949 0.924 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
8. BX957337.1 BX957337.1 1685 2.689 - 0.878 - - - 0.885 0.926 - -
9. DTX4 ENSDARG00000076302 2642 2.675 0.870 - - - - 0.907 0.898 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
10. pkib ENSDARG00000053110 527 2.635 0.806 - - - - 0.917 0.912 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
11. atp1b4 ENSDARG00000053262 1337 2.626 - 0.877 - - - 0.922 0.827 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
12. st18 663 2.621 - 0.796 - - - 0.900 0.925 - - suppression of tumorigenicity 18, zinc finger
13. her15.2 her15.2 1701 2.62 - 0.751 - - - 0.937 0.932 - -
14. prph ENSDARG00000028306 242 2.592 0.847 - - - - 0.892 0.853 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
15. dpysl4 ENSDARG00000103490 534 2.588 - - - - - 0.878 0.910 0.800 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
16. rims2b ENSDARG00000102690 275 2.584 - 0.941 - - - 0.742 0.901 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
17. lhfpl4a ENSDARG00000111810 206 2.576 - 0.941 0.844 - - - 0.791 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
18. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.57 - 0.731 - - - 0.864 0.975 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
19. cacng8b ENSDARG00000070626 176 2.552 0.871 - - - - 0.767 0.914 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
20. ROBO3_1 ROBO3_1 468 2.546 - 0.764 - - - 0.902 0.880 - -
21. hmp19 2554 2.545 0.740 - - - - 0.869 0.936 - - HMP19 protein
22. trim2b ENSDARG00000076174 250 2.531 0.753 - - - - 0.860 0.918 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
23. PPFIA3 ENSDARG00000077053 310 2.528 - 0.731 - - - 0.854 0.943 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
24. prdm12b ENSDARG00000007430 914 2.524 - 0.800 - - - 0.821 0.903 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
25. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.504 - 0.896 - - - 0.842 0.766 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
26. pknox2 ENSDARG00000055349 784 2.49 - 0.819 - - - 0.877 0.794 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
27. lrrc4.1 ENSDARG00000069402 323 2.469 0.815 - - - - 0.719 0.935 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
28. gphnb ENSDARG00000100851 118 2.463 0.887 0.731 - - - - 0.845 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
29. fbxo41 ENSDARG00000078908 95 2.458 0.768 0.731 - - - - 0.959 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
30. thsd7ba ENSDARG00000095022 231 2.451 - 0.794 - - - 0.904 0.753 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
31. nmnat2 ENSDARG00000004580 370 2.45 - 0.837 - - - 0.762 0.851 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
32. nhlh2 ENSDARG00000025495 1860 2.45 0.787 0.703 - - - - 0.960 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
33. CABZ01029738.1 CABZ01029738.1 327 2.445 0.889 0.719 - - - - 0.837 - -
34. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 2.445 0.775 0.731 - - - - 0.939 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
35. CABZ01065506.1 CABZ01065506.1 204 2.445 - 0.731 - - - 0.832 0.882 - -
36. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.436 - 0.759 - - - 0.809 0.868 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
37. ccdc28b ENSDARG00000011222 528 2.433 0.764 - - - - 0.827 0.842 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
38. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.413 - 0.757 - - - 0.866 0.790 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
39. add2 ENSDARG00000074581 1402 2.399 - - - - - 0.762 0.931 0.706 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
40. irx5b ENSDARG00000074070 459 2.398 0.776 - - - - 0.900 0.722 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
41. her4.1 ENSDARG00000056732 1264 2.385 0.773 - - - - 0.743 0.869 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
42. gad1b ENSDARG00000027419 440 2.374 0.715 - - - - 0.751 0.908 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
43. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.37 - 0.731 - - - 0.732 0.907 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
44. CABZ01028287.1 CABZ01028287.1 626 2.367 0.847 0.712 - - - - 0.808 - -
45. sprn ENSDARG00000056004 128 2.366 - 0.731 - - - - 0.913 0.722 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
46. nrcam nrcam 397 2.349 - 0.731 - - - 0.831 0.787 - -
47. RPH3A RPH3A 309 2.328 0.742 - - - - 0.731 0.855 - -
48. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.327 - 0.756 - - - 0.720 0.851 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
49. dnajc6 ENSDARG00000079891 438 1.924 - - - - - 0.969 0.955 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
50. CABZ01080599.2 CABZ01080599.2 192 1.904 - 0.929 - - - - 0.975 - -
51. RAB39B RAB39B 482 1.898 - 1.000 - - - - 0.898 - -
52. st8sia5 ENSDARG00000036584 529 1.89 - - - - - 0.922 0.968 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
53. BSN_1 BSN_1 21 1.877 0.928 - - - - - 0.949 - -
54. TRIM46 TRIM46 73 1.87 0.928 - - - - - 0.942 - -
55. nxph1 ENSDARG00000033447 182 1.865 - - - - - 0.927 0.938 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
56. tnika ENSDARG00000056218 728 1.856 - - - - - 0.935 0.921 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
57. pcsk1nl ENSDARG00000076170 1232 1.855 - - - - - 0.878 0.977 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
58. plp1a ENSDARG00000103732 3544 1.855 - - - - - 0.909 0.946 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
59. nexmifb ENSDARG00000029296 416 1.852 - - - - - 0.929 0.923 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
60. mapk12b ENSDARG00000006409 2246 1.85 - - - - - 0.928 0.922 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
61. syn2a ENSDARG00000045945 434 1.849 - - - - - 0.884 0.965 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
62. ADAM22 ENSDARG00000060532 2259 1.846 - - - - - 0.925 0.921 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
63. si:ch73-21g5.7 ENSDARG00000093156 9412 1.845 - - - - - 0.913 0.932 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
64. zic3 ENSDARG00000071497 1448 1.838 - - - - - 0.900 0.938 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
65. map6 map6 70 1.837 0.929 - - - - - 0.908 - -
66. cbln1 ENSDARG00000057296 165 1.837 - - - - - 0.882 0.955 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
67. C19H7orf41 C19H7orf41 2243 1.835 - - - - - 0.943 0.892 - -
68. cldn5a ENSDARG00000043716 3865 1.833 - - - - - 0.923 0.910 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
69. st8sia2 ENSDARG00000018788 2183 1.832 - - - - - 0.890 0.942 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
70. slc6a1b ENSDARG00000039647 1301 1.832 - - - - - 0.951 0.881 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
71. WNK2 ENSDARG00000104989 429 1.831 0.882 - - - - - 0.949 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
72. st6gal1 ENSDARG00000044514 142 1.83 - - - - - 0.885 0.945 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
73. stmn1b ENSDARG00000033655 9491 1.826 - - - - - 0.907 0.919 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
74. ENTHD1 ENTHD1 235 1.823 0.913 - - - - - 0.910 - -
75. cnrip1a ENSDARG00000091683 1491 1.821 - - - - - 0.894 0.927 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
76. adarb1a ENSDARG00000041609 476 1.821 - - - - - 0.941 0.880 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
77. sox2 ENSDARG00000070913 2763 1.817 - - - - - 0.910 0.907 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
78. pcdh1gc5 ENSDARG00000104826 10052 1.817 - - - - - 0.854 0.963 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
79. cacng8a ENSDARG00000020450 32 1.816 - - - - - 0.859 0.957 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
80. sez6l2 ENSDARG00000076052 360 1.814 - - - - - 0.875 0.939 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
81. rdh12 ENSDARG00000018069 396 1.812 - - - - - 0.874 0.938 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
82. elavl4 ENSDARG00000045639 998 1.811 - 0.849 - - - - 0.962 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
83. AL929252.1 AL929252.1 81 1.811 - - - - - 0.869 0.942 - -
84. eno2 ENSDARG00000014287 2162 1.809 - - - - - 0.878 0.931 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
85. notch1b ENSDARG00000052094 7874 1.807 - - - - - 0.907 0.900 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
86. syt11a ENSDARG00000057913 1145 1.806 - - - - - 0.861 0.945 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
87. glra1 ENSDARG00000012019 315 1.805 - - - - - 0.911 0.894 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
88. mpz ENSDARG00000038609 1740 1.803 0.868 - - - - - 0.935 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
89. lgi3 ENSDARG00000041358 46 1.803 - - - - - 0.863 0.940 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
90. stxbp1a ENSDARG00000001994 5154 1.802 - - - - - 0.856 0.946 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
91. rap2ip rap2ip 681 1.799 - - - - - 0.844 0.955 - -
92. kcnn1a ENSDARG00000091306 95 1.796 - - - - - 0.899 0.897 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
93. si:ch211-133l11.10 ENSDARG00000005626 381 1.795 - - - - - 0.890 0.905 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
94. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.788 - - - - - 0.941 0.847 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
95. cers6 ENSDARG00000053583 247 1.787 - - - - - 0.821 0.966 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
96. C7H4orf48 C7H4orf48 1455 1.786 - - - - - 0.856 0.930 - -
97. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.786 - - - - - 0.864 0.922 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
98. LINGO2 LINGO2 300 1.785 - - - - - 0.902 0.883 - -
99. mnx2a ENSDARG00000042106 939 1.784 - 0.911 - - - - 0.873 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
100. itm2ca ENSDARG00000043448 1265 1.784 - 0.814 - - - - 0.970 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]

There are 2289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA