Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for scarb1

Gene Name Gene ID Reads Annotation
scarb1 ENSDARG00000101557 503 scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]










Genes with expression patterns similar to scarb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scarb1 ENSDARG00000101557 503 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
2. itsn1 ENSDARG00000000086 684 1.813 0.991 - - - - - - 0.822 - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
3. armc8 ENSDARG00000062258, ENSDARG00000110157 467 1.805 0.994 - - - - - - 0.811 - armadillo repeat containing 8 [Source:ZFIN;Acc:ZDB-GENE-061027-88]
4. snx11 ENSDARG00000052522 1030 1.792 0.971 - - - - - - 0.821 - sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
5. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 1.785 0.992 0.793 - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
6. pelo ENSDARG00000055477 1927 1.753 0.953 - - 0.800 - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
7. BX511263.1 BX511263.1 64 1.753 - 0.807 - - - - - 0.946 -
8. pfkfb3 ENSDARG00000001953 656 1.711 0.991 - - 0.720 - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
9. FEZ2_1 FEZ2_1 153 1.709 - - - 0.772 - - - 0.937 -
10. timm10b ENSDARG00000043898 1233 1.705 0.989 - - - - - - 0.716 - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
11. nudt5 ENSDARG00000078073 779 1.689 0.974 - - - - - - 0.715 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
12. cd40 ENSDARG00000054968 90 1.688 - 0.740 - - - - - 0.948 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
13. nlgn3b ENSDARG00000062376 171 1.682 - - - 0.782 - - - 0.900 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
14. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.641 - 0.828 - - - - - 0.813 - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
15. ar ENSDARG00000067976, ENSDARG00000114287 192 1.641 - - - 0.739 - - - 0.902 - androgen receptor [Source:ZFIN;Acc:ZDB-GENE-060131-1]
16. atp8b1 ENSDARG00000060980 181 1.614 - 0.820 - - - - - 0.794 - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
17. mysm1 ENSDARG00000034693 291 1.603 - 0.711 - - - - - 0.892 - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
18. megf10 ENSDARG00000017229 656 1.592 - - - - - - 0.843 0.749 - multiple EGF-like-domains 10 [Source:ZFIN;Acc:ZDB-GENE-080506-1]
19. slc39a10 ENSDARG00000005823 2634 1.591 - - - - - - 0.804 0.787 - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
20. hsd17b4 ENSDARG00000101239 301 1.582 - - - 0.752 - - 0.830 - - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
21. PIGB ENSDARG00000105011 277 1.58 - - - 0.793 - - 0.787 - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
22. thbs3b ENSDARG00000012060 922 1.58 - 0.772 - - - - 0.808 - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
23. zgc:136254 ENSDARG00000068465 27 1.565 - 0.789 0.776 - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
24. GRAMD1C ENSDARG00000076238 795 1.564 - - - - - - 0.742 0.822 - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
25. cenpo ENSDARG00000075619, ENSDARG00000111160 378 1.559 - - - - - 0.702 - 0.857 - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
26. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 1.557 - - - - - 0.709 - 0.848 - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
27. 5S_rRNA_18 5S_rRNA_18 270 1.554 - 0.768 - 0.786 - - - - -
28. adat3 ENSDARG00000005640 96 1.55 - - - 0.795 - - - - 0.755 adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
29. foxa3 ENSDARG00000012788 405 1.537 - - 0.782 - - - - 0.755 - forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]
30. tmem30c ENSDARG00000009430, ENSDARG00000117066 124 1.528 - 0.700 - - - - 0.828 - - transmembrane protein 30C [Source:ZFIN;Acc:ZDB-GENE-040426-1127]
31. trap1_1 ENSDARG00000024317, ENSDARG00000114173 480 1.525 - 0.784 - 0.741 - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
32. otof otof 127 1.522 - 0.789 - 0.733 - - - - -
33. si:dkeyp-82a1.6 ENSDARG00000094336 228 1.513 - 0.720 - 0.793 - - - - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
34. arhgap10 ENSDARG00000078326 994 1.509 - - - 0.764 - - 0.745 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
35. mroh1 ENSDARG00000016573 287 1.5 - - - - - - 0.712 0.788 - maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
36. maml3 ENSDARG00000079552 357 1.495 - - - 0.759 - - - 0.736 - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
37. armc9 ENSDARG00000087299 459 1.463 - - 0.762 - - 0.701 - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
38. sdr39u1 ENSDARG00000099617 225 1.452 - 0.710 - - - - - 0.742 - short chain dehydrogenase/reductase family 39U, member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-104]
39. si:dkey-98p3.7 si:dkey-98p3.7 147 1.423 - 0.707 0.716 - - - - - -
40. GAS2L1 ENSDARG00000078803 315 0.997 0.997 - - - - - - - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
41. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.996 0.996 - - - - - - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
42. selj 884 0.996 0.996 - - - - - - - - selenoprotein J
43. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.996 0.996 - - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
44. cp ENSDARG00000010312 1245 0.995 0.995 - - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
45. SLC6A16_1 SLC6A16_1 1130 0.994 0.994 - - - - - - - -
46. si:dkey-10f21.16 si:dkey-10f21.16 252 0.993 0.993 - - - - - - - -
47. evi5b ENSDARG00000070839 239 0.993 0.993 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
48. MRAS_1 ENSDARG00000075285 318 0.993 0.993 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
49. rgs12b ENSDARG00000036774 5088 0.993 0.993 - - - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
50. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.993 0.993 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
51. spata13 ENSDARG00000062837 5330 0.993 0.993 - - - - - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
52. dnajb6a ENSDARG00000004680 914 0.993 0.993 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-45]
53. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.993 0.993 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
54. si:ch211-71m22.1 ENSDARG00000058638 169 0.993 0.993 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
55. ENSDARG00000090222 ENSDARG00000090222 402 0.993 0.993 - - - - - - - -
56. TTC9 ENSDARG00000074363 196 0.993 0.993 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
57. ENSDARG00000076021 ENSDARG00000076021 162 0.993 0.993 - - - - - - - -
58. ppcs ENSDARG00000061889 224 0.993 0.993 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
59. IRF2 ENSDARG00000040465 453 0.992 0.992 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
60. FRMPD1_1 FRMPD1_1 1589 0.992 0.992 - - - - - - - -
61. nab1b ENSDARG00000040700 289 0.992 0.992 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
62. sos1 ENSDARG00000100503 388 0.992 0.992 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
63. CU459072.2 CU459072.2 322 0.992 0.992 - - - - - - - -
64. wu:fj13e08 1223 0.992 0.992 - - - - - - - - wu:fj13e08
65. snai2 ENSDARG00000040046 2415 0.991 0.991 - - - - - - - - snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
66. wdtc1 ENSDARG00000059760 1218 0.991 0.991 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
67. tfcp2 ENSDARG00000060306 1024 0.991 0.991 - - - - - - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
68. mboat2a ENSDARG00000031845 1255 0.991 0.991 - - - - - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
69. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.991 0.991 - - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
70. arhgef12b ENSDARG00000100913 1358 0.991 0.991 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
71. MYADML2 ENSDARG00000053953 810 0.991 0.991 - - - - - - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
72. ttc27 ENSDARG00000007918 1228 0.991 0.991 - - - - - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
73. egfra ENSDARG00000013847 2912 0.991 0.991 - - - - - - - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
74. PDCL3 ENSDARG00000100651 164 0.991 0.991 - - - - - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
75. poll ENSDARG00000039613 395 0.991 0.991 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
76. b4galnt3b ENSDARG00000058939 413 0.991 0.991 - - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
77. TMEM184B TMEM184B 1280 0.99 0.990 - - - - - - - -
78. tbc1d19 ENSDARG00000013842 253 0.99 0.990 - - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
79. cahz ENSDARG00000011166 5771 0.99 0.990 - - - - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
80. zrsr2 ENSDARG00000058448 335 0.99 0.990 - - - - - - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
81. FAM210A FAM210A 437 0.99 0.990 - - - - - - - -
82. HOMEZ HOMEZ 1824 0.99 0.990 - - - - - - - -
83. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.989 0.989 - - - - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
84. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 0.989 0.989 - - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
85. BAHD1 ENSDARG00000086789 1194 0.989 0.989 - - - - - - - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
86. cab39 ENSDARG00000043451 1326 0.989 0.989 - - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
87. TOM1L2 ENSDARG00000056394 793 0.989 0.989 - - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
88. aacs ENSDARG00000012468 1138 0.989 0.989 - - - - - - - - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
89. ugt5a5 807 0.989 0.989 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide A5
90. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 0.988 0.988 - - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
91. agpat4 ENSDARG00000069044 4487 0.988 0.988 - - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
92. ctsf ENSDARG00000063095 4564 0.987 0.987 - - - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
93. si:dkey-42i9.4 ENSDARG00000008049 4752 0.987 0.987 - - - - - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
94. GIT1 ENSDARG00000039489 1157 0.987 0.987 - - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
95. zgc:66448 ENSDARG00000022952 1045 0.987 0.987 - - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
96. camlg ENSDARG00000100409 2157 0.987 0.987 - - - - - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
97. mier1b ENSDARG00000001447 1680 0.987 0.987 - - - - - - - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
98. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 0.986 0.986 - - - - - - - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
99. chmp2bb ENSDARG00000002190 4629 0.986 0.986 - - - - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
100. kank1 kank1 2430 0.986 0.986 - - - - - - - -

There are 1183 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA