Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for samd7

Gene Name Gene ID Reads Annotation
samd7 ENSDARG00000060354 15 sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]










Genes with expression patterns similar to samd7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. samd7 ENSDARG00000060354 15 5 - - 1.000 1.000 1.000 - - 1.000 1.000 sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
2. atoh7 ENSDARG00000069552 254 1.728 - - - - - - - 0.857 0.871 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
3. tmx3 5 1.714 - - - - - - - 0.891 0.823 thioredoxin-related transmembrane protein 3
4. six6a ENSDARG00000025187 40 1.691 - - - - - - - 0.890 0.801 SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
5. si:dkey-225h23.4 si:dkey-225h23.4 7 1.681 - - - - 0.795 - - 0.886 -
6. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.656 - - - - - - - 0.733 0.923 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
7. irx4a ENSDARG00000035648 71 1.63 - - - - - - - 0.806 0.824 iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
8. zgc:110045 ENSDARG00000057141, ENSDARG00000110961 4 1.627 - - - - - - - 0.886 0.741 zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]
9. ndrg1b ENSDARG00000010420 116 1.616 - - - - - - - 0.720 0.896 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
10. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.6 - - 0.821 0.779 - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
11. nkx2.1a nkx2.1a 156 1.574 - - - - - - - 0.803 0.771
12. epb41l3b ENSDARG00000019917 9 1.572 - - 0.790 - - - - - 0.782 erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
13. zgc:171531 zgc:171531 77 1.554 - - - - - - - 0.731 0.823
14. six6b ENSDARG00000031316 132 1.537 - - - - - - - 0.819 0.718 SIX homeobox 6b [Source:ZFIN;Acc:ZDB-GENE-050522-308]
15. CABZ01030033.1 ENSDARG00000117613 3 1.537 - - - - - - - 0.786 0.751
16. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.531 - - - - - - - 0.757 0.774 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
17. hes2.2 ENSDARG00000068168 197 1.527 - - - - - - - 0.737 0.790 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
18. vsx2 ENSDARG00000005574 102 1.514 - - - - - - - 0.807 0.707 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
19. RNASEH2C_1 RNASEH2C_1 10 1.454 - - - 0.733 - - - 0.721 -
20. FMN1_1 FMN1_1 13 1.453 - - 0.733 - 0.720 - - - -
21. sinup ENSDARG00000017163 5 1 - - 1.000 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
22. BX548078.2 BX548078.2 6 1 - - 1.000 - - - - - -
23. tmem26b ENSDARG00000014682 2 1 - - 1.000 - - - - - - transmembrane protein 26b [Source:ZFIN;Acc:ZDB-GENE-080204-66]
24. ankar ENSDARG00000000516 3 1 - - 1.000 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
25. zswim6 ENSDARG00000101282 1 1 - - 1.000 - - - - - - zinc finger, SWIM-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-060602-4]
26. CR792453.1 ENSDARG00000095699 4 1 - - 1.000 - - - - - -
27. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 - - 1.000 - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
28. GPR137B GPR137B 50 1 - - 1.000 - - - - - -
29. smpdl3a ENSDARG00000053119 1 1 - - 1.000 - - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
30. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - 1.000 - - - - - -
31. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - 1.000 - - - - - -
32. kcnc2 ENSDARG00000057468 12 1 - - 1.000 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
33. clcf1 ENSDARG00000076140 5 1 - - 1.000 - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
34. clcn1b ENSDARG00000012269 12 1 - - 1.000 - - - - - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
35. dfnb31b 1 1 - - 1.000 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
36. neu4 ENSDARG00000057677 1 1 - - 1.000 - - - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
37. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - 1.000 - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
38. fank1 ENSDARG00000039657 9 1 - - 1.000 - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
39. runx2a ENSDARG00000040261 1 1 - - 1.000 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
40. CU596012.1 CU596012.1 24 1 - - 1.000 - - - - - -
41. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - - 1.000 - - - - - -
42. si:ch1073-75o15.4 ENSDARG00000094478 1 1 - - 1.000 - - - - - - si:ch1073-75o15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-199]
43. TDRD12 ENSDARG00000075217 3 1 - - 1.000 - - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
44. CR753866.2 CR753866.2 6 0.993 - - 0.993 - - - - - -
45. si:ch211-202h22.7 ENSDARG00000073912 18 0.991 - - 0.991 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
46. taf4b ENSDARG00000075732 3 0.977 - - 0.977 - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
47. si:ch211-207e19.16 si:ch211-207e19.16 3 0.977 - - 0.977 - - - - - -
48. lhpp ENSDARG00000060196 34 0.977 - - 0.977 - - - - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
49. crfb16 ENSDARG00000075181 40 0.977 - - 0.977 - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
50. slc25a15b ENSDARG00000062271, ENSDARG00000111891 75 0.964 - - 0.964 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15b [Source:ZFIN;Acc:ZDB-GENE-060526-35]
51. si:ch73-83c10.2 si:ch73-83c10.2 22 0.96 - - - 0.960 - - - - -
52. mir133b 1 0.96 - - - 0.960 - - - - - microRNA 133b
53. SGTA_1 SGTA_1 4 0.96 - - - 0.960 - - - - -
54. si:ch211-95j8.3 ENSDARG00000092580 20 0.96 - - 0.960 - - - - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
55. si:dkey-30j22.1 ENSDARG00000042829 25 0.96 - - - 0.960 - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
56. CCL-C11B CCL-C11B 51 0.96 - - - 0.960 - - - - -
57. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.96 - - - 0.960 - - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
58. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 0.958 - - 0.958 - - - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
59. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.958 - - 0.958 - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
60. nt5c1ba ENSDARG00000018153 31 0.958 - - - - - - - - 0.958 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
61. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 0.953 - - - 0.953 - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
62. ftr58 ENSDARG00000071238 10 0.952 - - 0.952 - - - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
63. cnga4 ENSDARG00000069383 6 0.952 - - - 0.952 - - - - - cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
64. RBM44 RBM44 25 0.95 - - 0.950 - - - - - -
65. frmd4bb ENSDARG00000076496 18 0.949 - - - 0.949 - - - - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
66. si:dkey-1b17.1 ENSDARG00000102258 15 0.948 - - - 0.948 - - - - - si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
67. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.944 - - - 0.944 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
68. CU896645.1 CU896645.1 10 0.939 - - - 0.939 - - - - -
69. wu:fd58b11 wu:fd58b11 21 0.935 - - - 0.935 - - - - -
70. USP43 USP43 14 0.934 - - 0.934 - - - - - -
71. SNORA14 SNORA14 10 0.933 - - - 0.933 - - - - -
72. LAMC2 ENSDARG00000068288 37 0.93 - - 0.930 - - - - - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
73. lhx2a ENSDARG00000037964 3 0.929 - - 0.929 - - - - - - LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
74. rx2 ENSDARG00000040321 112 0.928 - - - - - - - - 0.928 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
75. prdm1b ENSDARG00000098925 440 0.915 - - - - - - - - 0.915 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
76. TTC18 TTC18 58 0.907 - - - 0.907 - - - - -
77. irf8 ENSDARG00000056407 85 0.901 - - 0.901 - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
78. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 0.901 - - - 0.901 - - - - -
79. dnm3 dnm3 45 0.898 - - 0.898 - - - - - -
80. si:dkey-193h7.5 si:dkey-193h7.5 156 0.893 - - - 0.893 - - - - -
81. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 0.892 - - - - - - - - 0.892 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
82. FOLR1 FOLR1 25 0.89 - - 0.890 - - - - - -
83. trim35-31 ENSDARG00000052097, ENSDARG00000111232 0 0.886 - - - - - - - 0.886 - tripartite motif containing 35-31 [Source:ZFIN;Acc:ZDB-GENE-061009-3]
84. si:dkey-118j18.3 si:dkey-118j18.3 4 0.886 - - - - - - - 0.886 -
85. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 0.886 - - - - - - - 0.886 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
86. fabp11b ENSDARG00000002311 354 0.886 - - - - - - - - 0.886 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
87. ftr64 ENSDARG00000101514 33 0.886 - - - - - - - 0.886 - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
88. FNDC3A ENSDARG00000105503 11 0.886 - - - - - - - 0.886 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
89. ipp ENSDARG00000075339 3 0.886 - - - - - - - 0.886 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
90. phc3 ENSDARG00000074604 2 0.886 - - - - - - - 0.886 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
91. ASCC3 ENSDARG00000086678 1 0.886 - - - - - - - 0.886 - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
92. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 0.886 - - - - - - - 0.886 - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
93. RP1L1 RP1L1 15 0.886 - - - - - - - 0.886 -
94. nt5dc1 ENSDARG00000006797 3 0.886 - - - - - - - 0.886 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
95. U5_3 U5_3 3 0.886 - - - - - - - 0.886 -
96. si:ch211-264f5.5 si:ch211-264f5.5 2 0.886 - - - - - - - 0.886 -
97. BX927308.3 BX927308.3 126 0.886 - - - - - - - 0.886 -
98. SLCO2B1 ENSDARG00000054609 0 0.886 - - - - - - - 0.886 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
99. NLRC5 ENSDARG00000024631 11 0.886 - - - - - - - 0.886 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
100. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 0.886 - - - - - - - 0.886 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]

There are 364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA