Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for saa

Gene Name Gene ID Reads Annotation
saa ENSDARG00000045999 0 serum amyloid A [Source:ZFIN;Acc:ZDB-GENE-040927-15]










Genes with expression patterns similar to saa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TNFRSF14_1 TNFRSF14_1 165 1 - - - - - - - - 1.000
2. tmem167b ENSDARG00000059400 9 1 - - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
3. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - - - - - 1.000 si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
4. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - - - - 1.000
5. CR388152.1 CR388152.1 7 1 - - - - - - - - 1.000
6. CU855899.1 CU855899.1 2 1 - - - - - - - - 1.000
7. BX664622.1 ENSDARG00000101754 39 1 - - - - - - - - 1.000
8. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
9. CT573264.1 ENSDARG00000110089 0 1 - - - - - - - - 1.000
10. DIAPH2 ENSDARG00000076060 1 1 - - - - - - - - 1.000 diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
11. U5_7 U5_7 0 1 - - - - - - - - 1.000
12. CABZ01019905.2 CABZ01019905.2 1 1 - - - - - - - - 1.000
13. sh2d4b sh2d4b 1 1 - - - - - - - - 1.000
14. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
15. WNK4 WNK4 0 1 - - - - - - - - 1.000
16. si:dkey-14d8.2 38 1 - - - - - - - - 1.000 si:dkey-14d8.2
17. ugt5c1 ENSDARG00000061444 6 1 - - - - - - - - 1.000 UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
18. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
19. C2CD4C C2CD4C 4 1 - - - - - - - - 1.000
20. adarb2 ENSDARG00000071823 1 1 - - - - - - - - 1.000 adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
21. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
22. BX649314.1 BX649314.1 3 1 - - - - - - - - 1.000
23. mib mib 1 1 - - - - - - - - 1.000
24. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - - - - - 1.000
25. CR631122.1 ENSDARG00000044534 8 1 - - - - - - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
26. CR846080.4 CR846080.4 6 1 - - - - - - - - 1.000
27. tirap ENSDARG00000074371 10 1 - - - - - - - - 1.000 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
28. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - - - - - - - 1.000 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
29. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
30. sts ENSDARG00000053241 10 1 - - - - - - - - 1.000 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
31. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
32. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - - 1.000
33. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - - - - 1.000
34. MYO9B_1 ENSDARG00000078313 1 1 - - - - - - - - 1.000 myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
35. FMNL1 FMNL1 7 1 - - - - - - - - 1.000
36. prdm11 ENSDARG00000074468 2 1 - - - - - - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
37. si:dkey-30c15.12 ENSDARG00000058546 12 1 - - - - - - - - 1.000 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
38. si:ch211-269m17.1 si:ch211-269m17.1 1 1 - - - - - - - - 1.000
39. RAB35 RAB35 4 1 - - - - - - - - 1.000
40. TACR3 TACR3 1 1 - - - - - - - - 1.000
41. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - - - - 1.000 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
42. ccdc170 ENSDARG00000016161 18 1 - - - - - - - - 1.000 coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
43. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - - - - 1.000
44. BX511021.4 ENSDARG00000117436 4 1 - - - - - - - - 1.000
45. CU104716.1 ENSDARG00000109332 12 1 - - - - - - - - 1.000
46. snR50 snR50 1 1 - - - - - - - - 1.000
47. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - - - - - - - 1.000
48. zgc:173619_1 2 1 - - - - - - - - 1.000 zgc:173619
49. cox5aa ENSDARG00000088383 21 1 - - - - - - - - 1.000 cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
50. U4_1 U4_1 2 1 - - - - - - - - 1.000
51. pin1 ENSDARG00000101915 1 1 - - - - - - - - 1.000 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1714]
52. si:ch211-113a14.17 15 1 - - - - - - - - 1.000 si:ch211-113a14.17
53. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
54. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - - 1.000 si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
55. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - - - - - - - 1.000
56. zgc:174180 ENSDARG00000098677, ENSDARG00000101389 5 1 - - - - - - - - 1.000 zgc:174180 [Source:ZFIN;Acc:ZDB-GENE-080206-1]
57. saa ENSDARG00000045999 0 1 - - - - - - - - 1.000 serum amyloid A [Source:ZFIN;Acc:ZDB-GENE-040927-15]
58. fam19a1 7 1 - - - - - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
59. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
60. CR812472.3 ENSDARG00000109834 0 1 - - - - - - - - 1.000 platelet-derived growth factor beta polypeptide b [Source:NCBI gene;Acc:796490]
61. CMA1_13 CMA1_13 0 1 - - - - - - - - 1.000
62. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - - - - 1.000
63. itpr2 ENSDARG00000011909 3 1 - - - - - - - - 1.000 inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
64. mgat4a ENSDARG00000063330 3 1 - - - - - - - - 1.000 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
65. XRCC2 ENSDARG00000013933 15 1 - - - - - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
66. slc8a1a ENSDARG00000013422 12 0.994 - - - - - - - - 0.994 solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
67. si:dkey-29d8.3 ENSDARG00000091879 21 0.977 - - - - - - - - 0.977 si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
68. EPS15L1 EPS15L1 22 0.977 - - - - - - - - 0.977
69. STRC ENSDARG00000105391 10 0.97 - - - - - - - - 0.970 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
70. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 0.951 - - - - - - - - 0.951 fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
71. CABZ01064671.1 ENSDARG00000039935 21 0.944 - - - - - - - - 0.944
72. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 0.935 - - - - - - - - 0.935 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
73. dnajc5b ENSDARG00000058147 6 0.935 - - - - - - - - 0.935 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
74. vap ENSDARG00000093053, ENSDARG00000100949 6 0.917 - - - - - - - - 0.917 vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
75. ttll5 ENSDARG00000036793 4 0.917 - - - - - - - - 0.917 tubulin tyrosine ligase-like family, member 5 [Source:ZFIN;Acc:ZDB-GENE-100922-236]
76. si:dkey-222o15.4 si:dkey-222o15.4 4 0.917 - - - - - - - - 0.917
77. zgc:173652_1 4 0.917 - - - - - - - - 0.917 zgc:173652
78. ciita ENSDARG00000090851 5 0.917 - - - - - - - - 0.917 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
79. zgc:100951 ENSDARG00000111442 24 0.916 - - - - - - - - 0.916 zgc:100951 [Source:ZFIN;Acc:ZDB-GENE-040801-141]
80. slc7a9 ENSDARG00000005894 29 0.858 - - - - - - - - 0.858 solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
81. si:ch211-225h9.2 si:ch211-225h9.2 16 0.858 - - - - - - - - 0.858
82. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 0.837 - - - - - - - - 0.837 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
83. nptx2b ENSDARG00000045164 5 0.837 - - - - - - - - 0.837 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
84. DNM2 DNM2 2 0.837 - - - - - - - - 0.837
85. PEG3_7 PEG3_7 15 0.837 - - - - - - - - 0.837
86. acer3 ENSDARG00000093366 7 0.837 - - - - - - - - 0.837 alkaline ceramidase 3 [Source:ZFIN;Acc:ZDB-GENE-091204-155]
87. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.834 - - - - - - - - 0.834 zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
88. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 0.832 - - - - - - - - 0.832 forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
89. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 0.832 - - - - - - - - 0.832 forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
90. pou4f3 ENSDARG00000006206 8 0.821 - - - - - - - - 0.821 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
91. grin2da ENSDARG00000086207 28 0.814 - - - - - - - - 0.814 glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
92. nox1_1 ENSDARG00000087574 1 0.805 - - - - - - - - 0.805 NADPH oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-070404-1]
93. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 0.805 - - - - - - - - 0.805
94. CU062628.1 ENSDARG00000090267 3 0.805 - - - - - - - - 0.805 trypsin-2-like [Source:NCBI gene;Acc:103908930]
95. si:dkey-4c15.9 ENSDARG00000092152 1 0.805 - - - - - - - - 0.805 si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
96. si:dkey-14o6.7 si:dkey-14o6.7 9 0.805 - - - - - - - - 0.805
97. CU179703.1 CU179703.1 5 0.805 - - - - - - - - 0.805
98. CU694951.2 CU694951.2 1 0.805 - - - - - - - - 0.805
99. CR382327.1 ENSDARG00000088739 56 0.801 - - - - - - - - 0.801
100. CABZ01064972.1 ENSDARG00000098966 199 0.795 - - - - - - - - 0.795 uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]

There are 29 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA