Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rrh

Gene Name Gene ID Reads Annotation
rrh ENSDARG00000039534 4 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]










Genes with expression patterns similar to rrh

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rrh ENSDARG00000039534 4 5 - - - 1.000 1.000 1.000 - 1.000 1.000 retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
2. nid2b ENSDARG00000009471 4 2 - - - - 1.000 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
3. asic4a ENSDARG00000025162 25 2 - - - - 1.000 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
4. FAM13C FAM13C 1 2 - - - - 1.000 1.000 - - -
5. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1.867 - - - - - 1.000 - - 0.867 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
6. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.867 - - - - - 1.000 - - 0.867 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
7. CR774179.1 ENSDARG00000086969 3 1.867 - - - - 1.000 - - - 0.867
8. zgc:92161 ENSDARG00000101749 27 1.867 - - - - - 1.000 - - 0.867 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
9. FAM185A ENSDARG00000019142 3 1.867 - - - - 1.000 - - - 0.867 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
10. CABZ01112732.1 ENSDARG00000068453 4 1.867 - - - - - 1.000 - - 0.867 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
11. cyp2p9 ENSDARG00000022631 1 1.867 - - - - 1.000 - - - 0.867 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
12. grin2cb ENSDARG00000077560 9 1.867 - - - - - 1.000 - - 0.867 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
13. lifra ENSDARG00000098857 11 1.867 - - - - 1.000 - - - 0.867 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
14. ahr1b ENSDARG00000023537 44 1.829 - - - - - 1.000 - - 0.829 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
15. CR855307.2 CR855307.2 1 1.761 - - - - 1.000 - - 0.761 -
16. zgc:112958 zgc:112958 5 1.761 - - - - 1.000 - - 0.761 -
17. CABZ01023423.1 CABZ01023423.1 8 1.758 - - - 0.758 - 1.000 - - -
18. si:dkey-208k4.10 si:dkey-208k4.10 1 1.753 - - - - 0.753 1.000 - - -
19. BX546499.1 ENSDARG00000092602 1 1.628 - - - - - - - 0.761 0.867
20. npy8br ENSDARG00000005780 15 1.58 - - - - - 0.864 - 0.716 - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
21. BX248324.1 ENSDARG00000096489 3 1.567 - - - - 0.806 - - 0.761 -
22. SERINC4 ENSDARG00000044815 45 1.491 - - - - - 0.749 - - 0.742 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
23. SRCIN1 SRCIN1 5 1.487 - - - 0.736 - - - - 0.751
24. si:ch211-167b20.7 si:ch211-167b20.7 3 1.485 - - - - 0.724 - - 0.761 -
25. si:ch211-3o3.8 si:ch211-3o3.8 2 1 - - - - - 1.000 - - -
26. pmch ENSDARG00000073959 1 1 - - - - 1.000 - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
27. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
28. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
29. PLD4 1 1 - - - - 1.000 - - - - phospholipase D family member 4
30. sh2b3 ENSDARG00000069958 0 1 - - - - 1.000 - - - - SH2B adaptor protein 3 [Source:ZFIN;Acc:ZDB-GENE-041210-359]
31. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
32. VWDE_1 VWDE_1 2 1 - - - - 1.000 - - - -
33. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - 1.000 - - - - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
34. fgd1 ENSDARG00000100402 18 1 - - - - 1.000 - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
35. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
36. si:dkey-4p15.4 ENSDARG00000096658 0 1 - - - - 1.000 - - - - si:dkey-4p15.4 [Source:ZFIN;Acc:ZDB-GENE-121214-305]
37. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - 1.000 - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
38. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
39. usp34 0 1 - - - - 1.000 - - - - ubiquitin specific peptidase 34
40. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
41. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
42. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
43. si:dkeyp-50f5.4 si:dkeyp-50f5.4 0 1 - - - - 1.000 - - - -
44. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - 1.000 - - - -
45. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - 1.000 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
46. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - - - 1.000 - - -
47. rx3 ENSDARG00000052893 43 1 - - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
48. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
49. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
50. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
51. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
52. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
53. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
54. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
55. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
56. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
57. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
58. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
59. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
60. PDE4A ENSDARG00000032344 1 1 - - - - 1.000 - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
61. AL935186.6 ENSDARG00000112275 5 1 - - - - 1.000 - - - -
62. PPAPDC3 PPAPDC3 14 1 - - - - - 1.000 - - -
63. hid1b ENSDARG00000100583 35 1 - - - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
64. ca10b ENSDARG00000009568 8 1 - - - - 1.000 - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
65. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 - - - - 1.000 - - - -
66. CABZ01059099.1 ENSDARG00000067927 1 1 - - - - 1.000 - - - - protein eva-1 homolog A-like [Source:NCBI gene;Acc:101882949]
67. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - - 1.000 - - - -
68. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
69. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
70. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
71. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
72. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
73. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
74. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
75. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
76. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
77. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
78. kcnk2b ENSDARG00000007151 1 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 2b [Source:ZFIN;Acc:ZDB-GENE-051120-69]
79. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
80. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
81. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
82. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
83. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
84. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
85. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
86. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
87. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
88. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - 1.000 - - - -
89. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
90. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - 1.000 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
91. si:ch211-202n12.3 si:ch211-202n12.3 0 1 - - - - 1.000 - - - -
92. FAM78A FAM78A 61 1 - - - - - 1.000 - - -
93. ndr2 ENSDARG00000101279 2 1 - - - - 1.000 - - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
94. cngb3 cngb3 12 1 - - - - - 1.000 - - -
95. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
96. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
97. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
98. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
99. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
100. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -

There are 806 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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