Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpp38

Gene Name Gene ID Reads Annotation
rpp38 ENSDARG00000040350 558 ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]










Genes with expression patterns similar to rpp38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpp38 ENSDARG00000040350 558 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]
2. aaas ENSDARG00000102274 1192 1.847 - - - - - 0.918 - 0.929 - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
3. zhx2 zhx2 365 1.737 - - - 0.791 - - - 0.946 -
4. fabp7b ENSDARG00000034650 397 1.721 0.753 - - - - - - 0.968 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
5. alg8 ENSDARG00000044627, ENSDARG00000114612 325 1.68 - - - - - 0.729 - 0.951 - ALG8, alpha-1,3-glucosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5812]
6. xirp2b ENSDARG00000091090 759 1.63 0.717 - - - - - - 0.913 - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
7. prmt1 ENSDARG00000010246 11311 1.543 - 0.702 - - - - - 0.841 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
8. ssb ENSDARG00000029252 3394 1.542 - 0.731 - - - - - 0.811 - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
9. si:dkey-273g18.1 ENSDARG00000097405, ENSDARG00000105439 64 1.519 0.717 - - - - 0.802 - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
10. SNORA2 SNORA2 486 1.491 0.772 0.719 - - - - - - -
11. nap1l4b ENSDARG00000068868 3285 1.45 - 0.732 - - - - - 0.718 - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
12. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.446 - - - - - 0.712 - 0.734 - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
13. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.978 - - - - - - - 0.978 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
14. celsr1b ENSDARG00000058259 1219 0.978 - - - - - - - 0.978 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
15. speg speg 334 0.977 - - - - - - - 0.977 -
16. hiat1b ENSDARG00000043055 757 0.977 - - - - - - - 0.977 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
17. ENSDARG00000089986 ENSDARG00000089986 308 0.976 - - - - - - - 0.976 -
18. gtf3c3 ENSDARG00000043247 202 0.976 - - - - - - - 0.976 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
19. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.976 - - - - - - - 0.976 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
20. dna2 ENSDARG00000078759 846 0.975 - - - - - - - 0.975 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
21. vhl ENSDARG00000070617 663 0.975 - - - - - - - 0.975 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
22. obfc1 obfc1 156 0.975 - - - - - - - 0.975 -
23. si:dkey-170k13.3 si:dkey-170k13.3 397 0.975 - - - - - - - 0.975 -
24. sec22c ENSDARG00000063387 203 0.974 - - - - - - - 0.974 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
25. CABZ01066957.1 CABZ01066957.1 161 0.974 - - - - - - - 0.974 -
26. uso1 ENSDARG00000019581 479 0.974 - - - - - - - 0.974 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
27. ogfr ENSDARG00000037837 1001 0.974 - - - - - - - 0.974 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
28. NUDT12 ENSDARG00000100813 378 0.974 - - - - - - - 0.974 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
29. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.974 - - - - - - - 0.974 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
30. WIZ WIZ 1188 0.974 - - - - - - - 0.974 -
31. lnx2b ENSDARG00000071478 654 0.973 - - - - - - - 0.973 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
32. C24H8orf33 C24H8orf33 406 0.973 - - - - - - - 0.973 -
33. siae ENSDARG00000040527, ENSDARG00000111850 186 0.973 - - - - - - - 0.973 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
34. smfn ENSDARG00000009806 1280 0.973 - - - - - - - 0.973 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
35. CABZ01027547.1 CABZ01027547.1 128 0.973 - - - - - - - 0.973 -
36. il21r il21r 74 0.973 - - - - - - - 0.973 -
37. fam86a fam86a 174 0.973 - - - - - - - 0.973 -
38. glipr1b ENSDARG00000030078 73 0.973 - - - - - - - 0.973 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
39. lingo4b ENSDARG00000078527 235 0.973 - - - - - - - 0.973 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
40. adcy1b ENSDARG00000088634 44 0.972 - - - - - - - 0.972 - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
41. GRIK3 ENSDARG00000077715 178 0.972 - - - - - - - 0.972 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
42. ENGASE ENSDARG00000010035 232 0.972 - - - - - - - 0.972 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
43. si:dkey-15h14.4 si:dkey-15h14.4 118 0.972 - - - - - - - 0.972 -
44. gucy1b3 92 0.972 - - - - - - - 0.972 - guanylate cyclase 1, soluble, beta 3
45. gpr37l1a ENSDARG00000006079 422 0.972 - - - - - - - 0.972 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
46. ftr29 ENSDARG00000075355 172 0.971 - - - - - - - 0.971 - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
47. lrit2 ENSDARG00000030626 69 0.971 - - - - - - - 0.971 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
48. scrn2 ENSDARG00000043497 204 0.971 - - - - - - - 0.971 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
49. wnt8b ENSDARG00000006911 98 0.971 - - - - - - - 0.971 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
50. cabp2b ENSDARG00000052277 119 0.971 - - - - - - - 0.971 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
51. syt5b ENSDARG00000011640 70 0.971 - - - - - - - 0.971 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
52. zdhhc3 zdhhc3 152 0.971 - - - - - - - 0.971 -
53. ZNF337_21 ZNF337_21 53 0.971 - - - - - - - 0.971 -
54. gtf3c2 ENSDARG00000004574 153 0.971 - - - - - - - 0.971 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
55. si:ch211-76l23.6 si:ch211-76l23.6 68 0.971 - - - - - - - 0.971 -
56. st6galnac1.2 ENSDARG00000043816 51 0.971 - - - - - - - 0.971 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
57. cdan1 ENSDARG00000042261 658 0.971 - - - - - - - 0.971 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
58. rgs9bp ENSDARG00000009466 41 0.971 - - - - - - - 0.971 - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
59. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 0.971 - - - - - - - 0.971 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
60. ZNF337_7 ZNF337_7 198 0.971 - - - - - - - 0.971 -
61. slc25a40 ENSDARG00000015856 359 0.97 - - - - - - - 0.970 - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
62. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.97 - - - - - - - 0.970 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
63. FBXO48 ENSDARG00000086184 110 0.97 - - - - - - - 0.970 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
64. si:ch211-57i17.2 ENSDARG00000093354 58 0.97 - - - - - - - 0.970 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
65. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.97 - - - - - - - 0.970 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
66. CR942805.1 CR942805.1 94 0.97 - - - - - - - 0.970 -
67. E2F2 E2F2 871 0.97 - - - - - - - 0.970 -
68. tgs1 190 0.97 - - - - - - - 0.970 - trimethylguanosine synthase 1, transcript variant X1
69. CABZ01058048.1 CABZ01058048.1 268 0.97 - - - - - - - 0.970 -
70. BX324131.3 BX324131.3 278 0.97 - - - - - - - 0.970 -
71. mier1a ENSDARG00000041072 1690 0.969 - - - - - - - 0.969 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
72. inaa ENSDARG00000011862 115 0.969 - - - - - - - 0.969 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
73. CR954963.1 ENSDARG00000097153 1135 0.969 - - - - - - - 0.969 -
74. zcchc10 ENSDARG00000091092 1333 0.969 - - - - - - - 0.969 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
75. cplx4c ENSDARG00000094889 253 0.969 - - - - - - - 0.969 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
76. CABZ01066717.1 CABZ01066717.1 351 0.969 - - - - - - - 0.969 -
77. rlbp1a ENSDARG00000012504 111 0.969 - - - - - - - 0.969 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
78. gnat2 ENSDARG00000042529 112 0.969 - - - - - - - 0.969 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
79. slc35b1_1 ENSDARG00000038213 194 0.968 - - - - - - - 0.968 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
80. bag5 ENSDARG00000017316 195 0.968 - - - - - - - 0.968 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
81. C16H8orf76 C16H8orf76 329 0.968 - - - - - - - 0.968 -
82. BX000999.4_1 BX000999.4_1 222 0.968 - - - - - - - 0.968 -
83. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 0.967 - - - - - - - 0.967 - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
84. prrg4 ENSDARG00000030753 1008 0.967 - - - - - - - 0.967 - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
85. vps18 ENSDARG00000070433 320 0.967 - - - - - - - 0.967 - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
86. txndc11 ENSDARG00000101291 589 0.967 - - - - - - - 0.967 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
87. exd3 ENSDARG00000063140 119 0.967 - - - - - - - 0.967 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
88. CABZ01073174.1 CABZ01073174.1 581 0.967 - - - - - - - 0.967 -
89. trps1 ENSDARG00000104082 918 0.967 - - - - - - - 0.967 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
90. ctnnal1 ENSDARG00000018162 747 0.966 - - - - - - - 0.966 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
91. zgc:112001 ENSDARG00000078034 93 0.966 - - - - - - - 0.966 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
92. pcyt1ba ENSDARG00000058162 206 0.966 - - - - - - - 0.966 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
93. smoc2 ENSDARG00000088157 646 0.966 - - - - - - - 0.966 - SPARC related modular calcium binding 2 [Source:ZFIN;Acc:ZDB-GENE-021031-5]
94. slco5a1 slco5a1 383 0.966 - - - - - - - 0.966 -
95. otx1b 96 0.965 - - - - - - - 0.965 - orthodenticle homeobox 1b
96. dnase2 ENSDARG00000073893 141 0.965 - - - - - - - 0.965 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
97. ABHD17A ABHD17A 453 0.965 - - - - - - - 0.965 -
98. BX927349.2 BX927349.2 325 0.965 - - - - - - - 0.965 -
99. topbp1 ENSDARG00000059322 241 0.965 - - - - - - - 0.965 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
100. fra10ac1 ENSDARG00000102615 425 0.965 - - - - - - - 0.965 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]

There are 973 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA