Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpap3

Gene Name Gene ID Reads Annotation
rpap3 ENSDARG00000087962 22 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]










Genes with expression patterns similar to rpap3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpap3 ENSDARG00000087962 22 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
2. GPR137B_1 GPR137B_1 8 2.38 - - - 0.714 - 0.962 - 0.704 -
3. si:dkey-40j3.1 si:dkey-40j3.1 1 2 - 1.000 - - - 1.000 - - -
4. CABZ01078124.1 CABZ01078124.1 4 1.881 - 1.000 - 0.881 - - - - -
5. cdc14aa ENSDARG00000013858 18 1.876 - 0.876 - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
6. si:ch211-105d18.8 si:ch211-105d18.8 38 1.866 - - 0.866 1.000 - - - - -
7. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.841 - - - 1.000 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
8. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1.828 - 1.000 0.828 - - - - - -
9. olig1 ENSDARG00000040948 1 1.778 - - - 1.000 0.778 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
10. im:7151068 im:7151068 2 1.778 - - - 1.000 0.778 - - - -
11. si:ch211-57m13.1 ENSDARG00000095927 1 1.778 - - - 1.000 0.778 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
12. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1.773 - - - 0.773 - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
13. shank3b ENSDARG00000063054 148 1.771 - - 0.806 - - 0.965 - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
14. LRTM1 ENSDARG00000098742 21 1.771 - 0.903 0.868 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
15. edil3 edil3 24 1.755 - 1.000 0.755 - - - - - -
16. C7H15orf43 C7H15orf43 10 1.754 - 1.000 - - - 0.754 - - -
17. si:ch211-26b3.4 ENSDARG00000075491 50 1.734 - 1.000 0.734 - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
18. si:dkey-163m14.7 65 1.733 - 1.000 0.733 - - - - - - si:dkey-163m14.7
19. CCDC74B CCDC74B 8 1.731 - - - 0.731 - 1.000 - - -
20. si:dkey-43k4.4 si:dkey-43k4.4 4 1.728 - - - - - 1.000 - - 0.728
21. CABZ01065246.2 CABZ01065246.2 45 1.723 - 0.945 - - 0.778 - - - -
22. vps13d ENSDARG00000017986 183 1.713 - 0.903 0.810 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
23. NETO2_1 NETO2_1 15 1.709 - 1.000 - - - 0.709 - - -
24. trim54 ENSDARG00000029907 10 1.705 - 1.000 - 0.705 - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
25. ANGEL1 ENSDARG00000077567 38 1.68 - 0.906 0.774 - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
26. polm ENSDARG00000103470 49 1.593 - - 0.864 - - - - - 0.729 polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
27. MLF1IP MLF1IP 15 1.487 - - - - 0.778 - - - 0.709
28. tmprss15 ENSDARG00000079393 25 1 - 1.000 - - - - - - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
29. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
30. arhgap15 ENSDARG00000062349 28 1 - 1.000 - - - - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
31. si:ch1073-219n12.1 71 1 - - - 1.000 - - - - - si:ch1073-219n12.1, transcript variant X1
32. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
33. myo7ab ENSDARG00000044632 1 1 - 1.000 - - - - - - - myosin VIIAb [Source:ZFIN;Acc:ZDB-GENE-091110-4]
34. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - 1.000 - - - - - - -
35. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - 1.000 - - - - -
36. setd1bb ENSDARG00000077244 34 1 - - - - - 1.000 - - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
37. CABZ01002339.1 CABZ01002339.1 0 1 - - - 1.000 - - - - -
38. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - 1.000 - - - - -
39. tshb tshb 7 1 - - - - - 1.000 - - -
40. kiss1 ENSDARG00000075829 4 1 - - - 1.000 - - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
41. NINJ1 ENSDARG00000103663 43 1 - 1.000 - - - - - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
42. PDE4A ENSDARG00000032344 1 1 - - - 1.000 - - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
43. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - 1.000 - - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
44. PCDH10 PCDH10 7 1 - - - 1.000 - - - - -
45. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - 1.000 - - - - -
46. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - 1.000 - - - - -
47. SNORD35_2 SNORD35_2 5 1 - - - 1.000 - - - - -
48. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - 1.000 - - - - - - -
49. batf ENSDARG00000011818 2 1 - 1.000 - - - - - - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
50. C12H10orf107 C12H10orf107 8 1 - 1.000 - - - - - - -
51. cnga3a ENSDARG00000070726 8 1 - 1.000 - - - - - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
52. dok1a ENSDARG00000078108 9 1 - 1.000 - - - - - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
53. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
54. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
55. habp2 ENSDARG00000057498 75 1 - 1.000 - - - - - - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
56. ASCC3 ENSDARG00000086678 1 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
57. BX908759.1 BX908759.1 52 1 - 1.000 - - - - - - -
58. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
59. SNORD65_1 SNORD65_1 25 1 - - - - - 1.000 - - -
60. SLC16A7 ENSDARG00000098258 4 1 - 1.000 - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
61. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - 1.000 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
62. snx33 ENSDARG00000014954 45 1 - - - - - 1.000 - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
63. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - 1.000 - - - - - - -
64. dnaaf3 ENSDARG00000092662 20 1 - - - 1.000 - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
65. CR354382.1 CR354382.1 42 1 - 1.000 - - - - - - -
66. cryba2a ENSDARG00000030349 1342 1 - - - - - 1.000 - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
67. si:dkey-32e6.6 ENSDARG00000070857 79 1 - 1.000 - - - - - - - si:dkey-32e6.6 [Source:ZFIN;Acc:ZDB-GENE-081031-90]
68. PPP2R2B PPP2R2B 257 1 - 1.000 - - - - - - -
69. si:dkey-185p13.1 ENSDARG00000095837 12 1 - - - 1.000 - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
70. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - 1.000 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
71. si:dkeyp-80c12.4 ENSDARG00000036479 7 1 - - - - - 1.000 - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
72. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
73. CABZ01044048.1 ENSDARG00000011463 20 1 - 1.000 - - - - - - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
74. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
75. phc3 ENSDARG00000074604 2 1 - - - 1.000 - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
76. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - 1.000 - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
77. dnajc5b ENSDARG00000058147 6 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
78. insl5b ENSDARG00000069294 1 1 - - - - - 1.000 - - - insulin-like 5b [Source:ZFIN;Acc:ZDB-GENE-070122-5]
79. notchl ENSDARG00000088308 28 1 - 1.000 - - - - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
80. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 - 1.000 - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
81. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
82. si:dkey-126g1.6 si:dkey-126g1.6 1 1 - - - - - 1.000 - - -
83. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
84. CU207245.1 ENSDARG00000102559 15 1 - 1.000 - - - - - - -
85. grk7a ENSDARG00000020602 10 1 - - - - - 1.000 - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
86. si:dkey-16j24.1 2 1 - 1.000 - - - - - - - si:dkey-16j24.1, transcript variant X1
87. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
88. mthfsd ENSDARG00000062042 34 1 - - - - - 1.000 - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
89. si:dkey-98j1.5 ENSDARG00000094005 10 1 - 1.000 - - - - - - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
90. GBF1 ENSDARG00000027016 30 1 - 1.000 - - - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
91. ZNF219 ENSDARG00000079738 1 1 - 1.000 - - - - - - - zinc finger protein 219 [Source:ZFIN;Acc:ZDB-GENE-110623-1]
92. RNF222 24 1 - - - - - 1.000 - - - ring finger protein 222
93. CU855880.2 CU855880.2 3 1 - - - - - 1.000 - - -
94. sh3bp1 ENSDARG00000078119 5 1 - - - - - 1.000 - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
95. XCR1 XCR1 9 1 - - - - - 1.000 - - -
96. acap3b ENSDARG00000099240 24 1 - 1.000 - - - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
97. si:dkeyp-66d7.5 si:dkeyp-66d7.5 1 1 - - - - - 1.000 - - -
98. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
99. BX005082.1 ENSDARG00000098558 2 1 - - - 1.000 - - - - -
100. cd8a ENSDARG00000044797 7 1 - - - - - 1.000 - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA