Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhot1b

Gene Name Gene ID Reads Annotation
rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]










Genes with expression patterns similar to rhot1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
2. si:ch211-119d14.3 ENSDARG00000075332 12 1.934 0.934 - - - - 1.000 - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
3. isg15 ENSDARG00000086374 8 1.804 - - - - - 1.000 0.804 - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
4. BPHL ENSDARG00000102877 28 1.801 0.801 - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
5. nphp3 ENSDARG00000078261 110 1.793 - 0.952 - - - - 0.841 - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
6. SLC4A8 ENSDARG00000015531 16 1.777 0.777 - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
7. si:ch211-76l23.4 ENSDARG00000096242 202 1.777 0.777 - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
8. SRCRB4D SRCRB4D 4 1.772 - - - - 0.772 1.000 - - -
9. slc35f3a ENSDARG00000075909 1 1.771 - 0.771 - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
10. PGBD4_4 PGBD4_4 15 1.771 - 0.771 - - - 1.000 - - -
11. ugt2b5 ugt2b5 17 1.691 - 0.771 - - - - 0.920 - -
12. KCNK3 KCNK3 115 1.65 0.811 - - - - - 0.839 - -
13. gprc6a ENSDARG00000005371 7 1.611 - 0.771 - - - - 0.840 - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
14. CABZ01063556.1 ENSDARG00000116344 319 1.61 - 0.714 - - - - 0.896 - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
15. fam160b1 ENSDARG00000060168 22 1.599 - - 0.759 - - - 0.840 - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
16. dnmt5 dnmt5 379 1.594 - 0.709 - - - - 0.885 - -
17. fut11 ENSDARG00000102402 56 1.593 0.777 - - - 0.816 - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
18. SLC38A8 SLC38A8 17 1.58 - 0.781 - - - 0.799 - - -
19. GFOD1 ENSDARG00000061363 67 1.564 - - - - - 0.791 0.773 - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
20. RP1L1 RP1L1 15 1.563 - 0.771 - - 0.792 - - - -
21. si:ch211-229i14.2 ENSDARG00000086048 19 1.554 - 0.771 - - - 0.783 - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
22. ugt5e1 ENSDARG00000058048 25 1.539 - 0.771 - - 0.768 - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
23. KIF21B ENSDARG00000009733 53 1.533 - - - 0.761 0.772 - - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
24. si:ch73-381a20.2 si:ch73-381a20.2 11 1.529 0.758 0.771 - - - - - - -
25. oraov1 497 1.528 - - - - - 0.748 0.780 - - oral cancer overexpressed 1
26. lcp2a ENSDARG00000055955 23 1.527 0.777 - - - 0.750 - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
27. klc1a ENSDARG00000009796 10 1.514 0.777 - - 0.737 - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
28. CABZ01055343.4 CABZ01055343.4 9 1.504 - 0.781 - 0.723 - - - - -
29. r3hcc1 ENSDARG00000099593 188 1.469 - 0.741 - - - - 0.728 - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
30. phactr2 ENSDARG00000027172 306 1.432 0.700 0.732 - - - - - - - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
31. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
32. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
33. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
34. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
35. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
36. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
37. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
38. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - 1.000 - - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
39. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
40. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
41. clcn2 clcn2 13 1 - - - - - 1.000 - - -
42. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
43. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
44. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
45. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
46. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
47. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
48. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
49. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
50. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
51. tmem44 ENSDARG00000068193 8 1 - - - - - 1.000 - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
52. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
53. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
54. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
55. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
56. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
57. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - 1.000 - - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
58. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
59. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
60. CU570981.1 CU570981.1 9 1 - - - - - 1.000 - - -
61. lonrf1 ENSDARG00000075048 13 1 - - - - - 1.000 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
62. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
63. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
64. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
65. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
66. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
67. NEFH NEFH 101 1 - 1.000 - - - - - - -
68. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -
69. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
70. UBXN11 ENSDARG00000053828 22 1 - - - - - 1.000 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
71. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
72. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
73. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
74. dnajc17 ENSDARG00000104959 70 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
75. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - - 1.000 - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
76. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - - - - - 1.000 - - -
77. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
78. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
79. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
80. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
81. si:dkey-57l19.1 ENSDARG00000098143 1 1 - - - - - 1.000 - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
82. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
83. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
84. si:ch211-274k16.9 ENSDARG00000095918 1 1 - - - - - 1.000 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]
85. rnasel2 ENSDARG00000043196 0 1 - - - - - 1.000 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
86. EPHB1 ENSDARG00000076757 20 1 - - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
87. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
88. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
89. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - 1.000 - - -
90. ctdnep1b ENSDARG00000035781 65 1 - - - - - 1.000 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
91. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
92. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
93. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
94. DEF6 DEF6 19 1 - - - - - 1.000 - - -
95. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
96. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
97. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
98. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
99. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
100. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -

There are 895 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA