Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhbdl3

Gene Name Gene ID Reads Annotation
rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]










Genes with expression patterns similar to rhbdl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
2. CU928222.1 ENSDARG00000097436 1662 3.467 - 0.952 - - - 0.857 0.935 - 0.723
3. her15.2 her15.2 1701 2.924 0.980 0.961 - - - - 0.983 - -
4. calca ENSDARG00000056590 150 2.787 - 0.937 - - - 0.882 0.968 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
5. neurog1 ENSDARG00000056130 3924 2.734 - 0.949 - - - 0.829 0.956 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
6. ptprnb ENSDARG00000077047 2743 2.73 - 0.929 - - - 0.859 0.942 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
7. SLC5A7 SLC5A7 453 2.718 - 0.932 - - - 0.847 0.939 - -
8. ADAMTS3 ENSDARG00000060127 2839 2.703 - 0.877 - - - 0.843 0.983 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
9. scg2a 800 2.697 - 0.876 - - - 0.911 0.910 - - secretogranin II (chromogranin C) a
10. nkx6.1 ENSDARG00000022569 3779 2.655 - 0.914 - - - 0.789 0.952 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
11. cdh7 582 2.64 - 0.874 - - - 0.834 0.932 - - cadherin 7, type 2, transcript variant X1
12. slc18a3a ENSDARG00000006356 1285 2.628 - 0.920 - - - 0.747 0.961 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
13. nes ENSDARG00000088805 2710 2.624 - 0.925 - - - 0.715 0.984 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
14. sox19b ENSDARG00000040266 532 2.619 - 0.929 - - - 0.775 0.915 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
15. CR848045.1 CR848045.1 459 2.612 - 0.871 - - - 0.827 0.914 - -
16. nhlh2 ENSDARG00000025495 1860 2.594 - 0.893 - - - 0.714 0.987 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
17. nadl1.1 1200 2.583 - 0.906 - - - 0.703 0.974 - - neural adhesion molecule L1.1, transcript variant X1
18. CABZ01080599.2 CABZ01080599.2 192 2.577 - 0.721 - - - 0.890 0.966 - -
19. CABZ01029738.1 CABZ01029738.1 327 2.526 - 0.929 - - - 0.714 0.883 - -
20. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.515 - 0.848 - - - 0.723 0.944 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
21. sv2bb ENSDARG00000060711 196 2.506 - 0.848 - - - 0.725 0.933 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
22. chrna2a ENSDARG00000006602 163 2.498 - 0.744 - - - 0.817 0.937 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
23. SSX2IP SSX2IP 316 2.493 - 0.819 - - - 0.704 0.970 - -
24. nova2 ENSDARG00000017673 7685 2.492 - 0.827 - - - 0.704 0.961 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
25. AL935029.1 AL935029.1 514 2.484 - 0.728 - - - 0.790 0.966 - -
26. dbx1a ENSDARG00000086393 3161 2.475 - 0.945 - - - 0.767 0.763 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
27. C8H1orf106 C8H1orf106 2690 2.464 - 0.755 - - - 0.791 0.918 - -
28. urp2 ENSDARG00000067781 85 2.462 - 0.848 - - - 0.912 0.702 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
29. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.461 - 0.793 - - - 0.725 0.943 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
30. zgc:113531 ENSDARG00000038794 2063 2.453 - 0.717 - - - 0.836 0.900 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
31. mnx2a ENSDARG00000042106 939 2.447 - 0.789 - - - 0.714 0.944 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
32. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.442 - 0.731 - - - 0.750 0.961 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
33. fyna ENSDARG00000011370 1679 2.408 - 0.742 - - - 0.804 0.862 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
34. ptpreb ENSDARG00000021151 739 2.395 - - - 0.866 - 0.718 0.811 - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
35. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 2.377 - 0.792 - - - 0.768 0.817 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
36. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.364 - 0.810 - - - 0.767 0.787 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
37. lhfpl4a ENSDARG00000111810 206 2.36 - 0.755 - - - 0.833 0.772 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
38. si:ch211-247j9.1 ENSDARG00000079283 217 2.313 - 0.707 - - - 0.800 0.806 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
39. nkx2.2a ENSDARG00000053298 747 2.18 - 0.737 - - - 0.731 0.712 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
40. sox2 ENSDARG00000070913 2763 1.928 - 0.955 - - - - 0.973 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
41. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.924 - 0.951 - - - - 0.973 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
42. lhx4 ENSDARG00000039458 328 1.92 - - - - - 0.946 0.974 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
43. slc35g2b ENSDARG00000045447 378 1.899 - 0.937 - - - - 0.962 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
44. itm2ca ENSDARG00000043448 1265 1.895 - 0.936 - - - - 0.959 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
45. pcdh1gc5 ENSDARG00000104826 10052 1.875 - 0.902 - - - - 0.973 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
46. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.872 - 0.906 - - - - 0.966 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
47. st18 663 1.868 - 0.899 - - - - 0.969 - - suppression of tumorigenicity 18, zinc finger
48. sst1.1 ENSDARG00000040799 677 1.866 - - - - - 0.933 0.933 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
49. dla ENSDARG00000010791 9281 1.864 - 0.915 - - - - 0.949 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
50. mir10d-1 mir10d-1 860 1.857 - 0.963 - - - - 0.894 - -
51. hectd2 ENSDARG00000061194 559 1.855 - - - - - 0.928 0.927 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
52. stxbp1a ENSDARG00000001994 5154 1.845 - 0.907 - - - - 0.938 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
53. CLIP3 ENSDARG00000054456 734 1.832 - 0.921 - - - - 0.911 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
54. pkd1b ENSDARG00000033029 461 1.829 - - - - - 0.935 0.894 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
55. her13 ENSDARG00000007097 2000 1.826 - 0.834 - - - - 0.992 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
56. olig2 ENSDARG00000040946 1405 1.822 - 0.847 - - - - 0.975 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
57. chga ENSDARG00000008829 1086 1.809 - - - - - 0.867 0.942 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
58. TRIM46 TRIM46 73 1.807 - - - - - 0.863 0.944 - -
59. LRRN3 LRRN3 261 1.804 - 0.848 - - - - 0.956 - -
60. im:7162084 im:7162084 665 1.803 - - - - - 0.888 0.915 - -
61. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.802 - 0.853 - - - - 0.949 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
62. dbx2 2971 1.795 - 0.869 - - - - 0.926 - - developing brain homeobox 2
63. nkx6.2 ENSDARG00000104735 5081 1.792 - - - - - 0.870 0.922 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
64. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.792 - 0.848 - - - - 0.944 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
65. pcsk1nl ENSDARG00000076170 1232 1.79 - 0.821 - - - - 0.969 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
66. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.788 - - - - - 0.857 0.931 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
67. si:ch73-21g5.7 ENSDARG00000093156 9412 1.788 - 0.836 - - - - 0.952 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
68. dlg4 88 1.786 - - - - - 0.846 0.940 - - discs large MAGUK scaffold protein 4, transcript variant X5
69. gdap1l1 ENSDARG00000028628 233 1.783 0.822 - - - - - 0.961 - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
70. si:dkey-17e6.2 si:dkey-17e6.2 72 1.783 - - - - - 0.831 0.952 - -
71. tmie ENSDARG00000069423 305 1.783 - - - - - 0.873 0.910 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
72. b3galnt2 ENSDARG00000046133 68 1.779 - 0.835 - - - - 0.944 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
73. atp2b3b ENSDARG00000023445 1424 1.776 - 0.782 - - - - 0.994 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
74. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.774 - 0.931 - - - - 0.843 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
75. sox21b ENSDARG00000008540 1460 1.774 - 0.842 - - - - 0.932 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
76. pax6a ENSDARG00000103379 3061 1.77 - 0.936 - - - - 0.834 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
77. LRCH4 ENSDARG00000068258 22 1.768 - - - 0.824 - - 0.944 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
78. her4.3 ENSDARG00000070770 613 1.767 - - - - - 0.789 0.978 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
79. jph3 ENSDARG00000102204 175 1.766 - - - - - 0.868 0.898 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
80. elavl3 ENSDARG00000014420 8644 1.765 - - - - - 0.802 0.963 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
81. ROBO3_1 ROBO3_1 468 1.765 - 0.904 - - - - 0.861 - -
82. tnika ENSDARG00000056218 728 1.764 - 0.827 - - - - 0.937 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
83. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.763 - 0.794 - - - - 0.969 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
84. dync1i1 ENSDARG00000060948 554 1.763 - - - - - 0.783 0.980 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
85. BX511121.1 ENSDARG00000029997 1774 1.762 - - - - - 0.805 0.957 - -
86. tmem35 ENSDARG00000052567 5685 1.76 - - - - - 0.817 0.943 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
87. zic4 ENSDARG00000031307 1228 1.759 - 0.865 - - - - 0.894 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
88. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.759 - - - - - 0.818 0.941 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
89. SNAP91 ENSDARG00000098809 556 1.757 - 0.830 - - - - 0.927 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
90. chat chat 463 1.752 - - - - - 0.808 0.944 - -
91. adam23a ENSDARG00000062323 580 1.751 - 0.771 - - - - 0.980 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
92. rap2ip rap2ip 681 1.751 - 0.766 - - - - 0.985 - -
93. GLRA3 ENSDARG00000011066 242 1.75 - 0.826 - - - - 0.924 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
94. si:dkey-169l5.3 si:dkey-169l5.3 239 1.75 - - - - - 0.811 0.939 - -
95. ascl1a ENSDARG00000038386 1290 1.75 - 0.857 - - - - 0.893 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
96. BX957337.1 BX957337.1 1685 1.75 - 0.868 - - - - 0.882 - -
97. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.75 - - - - - 0.757 0.993 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
98. HSPA4L ENSDARG00000053544 363 1.749 - 0.831 - - - - 0.918 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
99. atp1b4 ENSDARG00000053262 1337 1.747 - 0.831 - - - - 0.916 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
100. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.746 - 0.858 - - - - 0.888 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]

There are 1914 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA