Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rhbdd2

Gene Name Gene ID Reads Annotation
rhbdd2 ENSDARG00000092463 937 rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]










Genes with expression patterns similar to rhbdd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rhbdd2 ENSDARG00000092463 937 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
2. dmtn ENSDARG00000013110 791 2.135 0.718 - - - - 0.709 - 0.708 - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
3. reep3l reep3l 608 1.885 - - - - 0.997 - - 0.888 -
4. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.849 0.853 - - - 0.996 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
5. ppme1 ENSDARG00000009771 1697 1.833 - - - - 0.993 0.840 - - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
6. smarcal1 ENSDARG00000102265 1921 1.832 - - - 0.834 0.998 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
7. tjp2a ENSDARG00000063309 1947 1.803 - - - - 0.994 - - 0.809 - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
8. ubtf ENSDARG00000035066 4070 1.764 - - - - 0.981 - - 0.783 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
9. rnf44 ENSDARG00000068582 1612 1.758 - - - - 0.968 - - 0.790 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
10. zgc:113333 ENSDARG00000038242 797 1.746 - 0.750 - - 0.996 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
11. TTF1_4 TTF1_4 504 1.742 - 0.859 - - - - - 0.883 -
12. zgc:111991 zgc:111991 159 1.72 - 0.810 - 0.910 - - - - -
13. xkr8.2 ENSDARG00000076820 51 1.705 0.784 - - 0.921 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
14. si:dkey-17e16.17 615 1.692 - 0.842 - 0.850 - - - - - si:dkey-17e16.17
15. nadl1.2 695 1.69 - 0.783 - - - - - 0.907 - neural adhesion molecule L1.2, transcript variant X1
16. kcnh7 ENSDARG00000062687 172 1.689 0.874 - - - - - 0.815 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
17. pemt ENSDARG00000103614 474 1.671 - - - 0.816 - - - 0.855 - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
18. C8H9orf172 C8H9orf172 113 1.664 0.752 - - 0.912 - - - - -
19. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 1.657 - 0.738 - - - - 0.919 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
20. si:dkey-17e6.2 si:dkey-17e6.2 72 1.65 0.752 - - - - - - 0.898 -
21. sin3ab ENSDARG00000059812 2140 1.639 - 0.889 - - - - 0.750 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
22. atp6ap1a ENSDARG00000041417 898 1.635 - 0.771 - - - - - 0.864 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
23. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.635 - 0.771 - - - - - 0.864 - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
24. adcyap1a ENSDARG00000004015 67 1.632 0.755 - - - - - - 0.877 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
25. usf1 ENSDARG00000041689 1619 1.632 - 0.813 - - - 0.819 - - - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
26. nrxn2b ENSDARG00000063150 343 1.626 0.714 - - - - - - 0.912 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
27. cbln1 ENSDARG00000057296 165 1.624 0.765 - - 0.859 - - - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
28. ncoa6 ENSDARG00000071272 759 1.621 - 0.732 - - - - - 0.889 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
29. dhrs13a.3 ENSDARG00000041137 271 1.617 - - - 0.844 - - 0.773 - - dehydrogenase/reductase (SDR family) member 13a, duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041114-134]
30. med14 ENSDARG00000009953 1383 1.613 - 0.818 - - - - - 0.795 - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
31. si:ch73-211l2.1 605 1.611 - 0.846 - - - - 0.765 - - si:ch73-211l2.1
32. ralgps2 ENSDARG00000026519 1610 1.601 - 0.759 - - - - - 0.842 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
33. parp6a ENSDARG00000042703 112 1.6 - 0.719 - 0.881 - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
34. ppp1r11 ENSDARG00000036063 587 1.598 - - - - - - 0.778 0.820 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
35. lmx1bb ENSDARG00000068365 627 1.596 0.855 0.741 - - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
36. oxct1a ENSDARG00000013063 1517 1.592 - - - 0.831 - - - 0.761 - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
37. nasp ENSDARG00000039208, ENSDARG00000114134 873 1.592 - 0.750 - - - 0.842 - - - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
38. GLIS2 GLIS2 141 1.58 - 0.784 - - - - 0.796 - -
39. arrdc2 ENSDARG00000020761 621 1.58 - 0.787 - - - - - 0.793 - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
40. alkbh4 ENSDARG00000052247 306 1.577 - - - 0.801 - - 0.776 - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
41. smap1 ENSDARG00000031302 222 1.574 - 0.703 - 0.871 - - - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
42. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1.571 - 0.770 - - - - 0.801 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
43. TUBB8P7 TUBB8P7 1353 1.567 0.747 - - 0.820 - - - - -
44. mtdhb ENSDARG00000004939 1225 1.561 - - - 0.857 - - - 0.704 - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
45. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.558 - - - - - 0.764 - 0.794 - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
46. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.555 - 0.717 - - - - - 0.838 - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
47. rreb1a ENSDARG00000063701 915 1.555 - - - 0.720 - - 0.835 - - ras responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030219-137]
48. lppr5b lppr5b 23 1.553 0.752 - - - - - 0.801 - -
49. si:dkeyp-1h4.8 208 1.55 - - - - - - 0.831 0.719 - si:dkeyp-1h4.8
50. wdr47a ENSDARG00000078136 522 1.549 - - - - - 0.768 0.781 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
51. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1.538 - 0.754 - - - - 0.784 - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
52. cnot10 ENSDARG00000058528 478 1.538 - 0.768 - - - - 0.770 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
53. hs3st3l ENSDARG00000059903 184 1.538 0.701 - - - - - 0.837 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
54. GPR158 GPR158 64 1.536 - 0.754 - - - - 0.782 - -
55. drd4a ENSDARG00000038363 82 1.534 0.739 - - - - - 0.795 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
56. trim45 ENSDARG00000076781 578 1.53 - - - 0.776 - - - 0.754 - tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
57. CR559945.3 CR559945.3 1029 1.529 - - - 0.707 - - - 0.822 -
58. cbx8a ENSDARG00000087327 361 1.527 - 0.738 - - - - 0.789 - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
59. cdc25 cdc25 3913 1.524 - - - 0.751 - 0.773 - - -
60. becn1 ENSDARG00000079128 581 1.523 0.751 0.772 - - - - - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
61. asic1b ENSDARG00000101866 61 1.522 0.752 0.770 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
62. iqsec3b ENSDARG00000093091 10 1.522 0.752 0.770 - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
63. fam92a1 ENSDARG00000004436 658 1.513 - 0.805 - - - - 0.708 - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
64. cdc45 ENSDARG00000043720 353 1.511 - - - 0.702 - - 0.809 - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
65. SEMA5B SEMA5B 1316 1.508 - - - 0.757 - - - 0.751 -
66. tacc1 ENSDARG00000073753 1127 1.508 - 0.785 - - - - 0.723 - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
67. wdr59 ENSDARG00000088817 1005 1.505 - 0.776 - - - - 0.729 - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
68. b3gnt3.1 ENSDARG00000043482 1991 1.504 - 0.744 - 0.760 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
69. kif5bb 1645 1.473 - - - - - - 0.725 0.748 - kinesin family member 5B, b
70. CABZ01021433.1 ENSDARG00000105696 74 1.471 0.752 0.719 - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
71. igsf21a ENSDARG00000031049 165 1.461 - - - - - - 0.702 0.759 - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
72. CDCA7L CDCA7L 1365 1.456 - 0.744 - - - - - 0.712 -
73. ppfia4 ENSDARG00000053205 276 1.451 0.703 0.748 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
74. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.442 - 0.725 - - - 0.717 - - - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
75. plek2 ENSDARG00000012789 102 1.439 0.727 - - - - - 0.712 - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
76. cpz ENSDARG00000075521 2356 1.436 - 0.704 - - - - - 0.732 - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
77. shisa3 ENSDARG00000075467 485 0.998 - - - - 0.998 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
78. NDST1 NDST1 1584 0.998 - - - - 0.998 - - - -
79. zgc:162816 ENSDARG00000070416 974 0.998 - - - - 0.998 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
80. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.998 - - - - 0.998 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
81. ABTB2 ABTB2 584 0.998 - - - - 0.998 - - - -
82. emid1 ENSDARG00000076119 862 0.998 - - - - 0.998 - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
83. commd3 ENSDARG00000045402 1601 0.998 - - - - 0.998 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
84. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.998 - - - - 0.998 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
85. zfyve21 ENSDARG00000027887 1687 0.997 - - - - 0.997 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
86. rnf11a ENSDARG00000010442 592 0.997 - - - - 0.997 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
87. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.997 - - - - 0.997 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
88. st3gal4 ENSDARG00000041006 636 0.997 - - - - 0.997 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
89. mutyh 512 0.997 - - - - 0.997 - - - - mutY DNA glycosylase
90. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.997 - - - - 0.997 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
91. foxi3a ENSDARG00000055926 749 0.997 - - - - 0.997 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
92. KDM5A ENSDARG00000104567 450 0.997 - - - - 0.997 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
93. gli2b ENSDARG00000020884 1468 0.997 - - - - 0.997 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
94. ccdc19 ccdc19 495 0.997 - - - - 0.997 - - - -
95. zgc:162967 zgc:162967 2132 0.997 - - - - 0.997 - - - -
96. tmem223 ENSDARG00000069494 1528 0.996 - - - - 0.996 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
97. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.996 - - - - 0.996 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
98. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.996 - - - - 0.996 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
99. dnajb12a ENSDARG00000039363 1072 0.996 - - - - 0.996 - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
100. si:dkey-20i20.2 ENSDARG00000071719 659 0.996 - - - - 0.996 - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]

There are 1718 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA