Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rgs3a

Gene Name Gene ID Reads Annotation
rgs3a ENSDARG00000099746 727 regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]










Genes with expression patterns similar to rgs3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rgs3a ENSDARG00000099746 727 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
2. ints3 ENSDARG00000016811 339 2.444 - 0.846 - - - 0.778 0.820 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
3. MLLT1 MLLT1 349 2.338 - 0.771 - - - 0.821 0.746 - -
4. arhgap27 ENSDARG00000104255 439 1.77 - - 0.887 - - 0.883 - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
5. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 1.769 - - 0.906 - - 0.863 - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
6. zgc:85910 zgc:85910 299 1.753 - - 0.890 - - 0.863 - - -
7. ptk2.1 ptk2.1 766 1.737 - - 0.894 - - - 0.843 - -
8. vps72 1164 1.734 - - 0.891 - - 0.843 - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
9. gpr144 gpr144 479 1.729 - - 0.927 - - 0.802 - - -
10. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.728 - - 0.911 - - - 0.817 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
11. si:dkey-270b7.1 si:dkey-270b7.1 83 1.715 - 0.815 - - - 0.900 - - -
12. rnd1 rnd1 1086 1.7 - - - - - 0.881 0.819 - -
13. fbxw8 ENSDARG00000079089 571 1.687 - - 0.911 0.776 - - - - - F-box and WD repeat domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-080204-111]
14. hs3st3l ENSDARG00000059903 184 1.683 - - - - - 0.884 0.799 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
15. erfl3 ENSDARG00000062801 149 1.677 - 0.835 - - - 0.842 - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
16. wu:fd44f01 wu:fd44f01 391 1.671 - - - - - 0.803 0.868 - -
17. CASK CASK 1750 1.669 - - 0.854 - - - 0.815 - -
18. mphosph10 ENSDARG00000012495 1679 1.667 - - 0.897 - - 0.770 - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
19. zgc:66484 ENSDARG00000030478 167 1.663 - - 0.924 - - 0.739 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
20. GPSM3 GPSM3 257 1.662 - - 0.908 - - - 0.754 - -
21. bmp4 ENSDARG00000019995 2038 1.658 - - 0.859 - - 0.799 - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
22. TRIP10 TRIP10 1079 1.658 - - 0.906 - - - 0.752 - -
23. bub1bb ENSDARG00000074927 1667 1.656 - - 0.811 - - 0.845 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
24. KIF26A KIF26A 1077 1.65 - - 0.891 - - 0.759 - - -
25. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 1.648 - - 0.908 - - - 0.740 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
26. pelo ENSDARG00000055477 1927 1.642 - - 0.932 0.710 - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
27. cdc5l ENSDARG00000043797 985 1.64 - - 0.889 - - - 0.751 - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
28. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1.637 - - - - - 0.820 0.817 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
29. rapgef1a ENSDARG00000043593 416 1.637 - - 0.908 - - 0.729 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
30. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.632 - - 0.907 - - 0.725 - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
31. CU638738.1 CU638738.1 131 1.628 - 0.739 - - - 0.889 - - -
32. phldb1a ENSDARG00000061093 1637 1.626 - - 0.827 - - 0.799 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
33. pik3c3 ENSDARG00000054829 559 1.625 - 0.775 - - - 0.850 - - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
34. SLC36A4 ENSDARG00000039661 175 1.621 - - - - - 0.850 0.771 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
35. DFNA5 DFNA5 201 1.618 - 0.794 - - - - 0.824 - -
36. C1H9orf156 C1H9orf156 122 1.617 - 0.814 - - - - 0.803 - -
37. layna ENSDARG00000035169 515 1.61 - - 0.886 - - 0.724 - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
38. fam46c 1913 1.597 - - 0.769 - - - 0.828 - - family with sequence similarity 46, member C
39. MIS12 ENSDARG00000026454 649 1.597 - - - - - 0.833 0.764 - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
40. senp6a ENSDARG00000102923 908 1.596 - - - - - 0.876 0.720 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
41. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.592 - 0.746 - - - 0.846 - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
42. map2k2b ENSDARG00000068918 676 1.592 - - - 0.765 - 0.827 - - - mitogen-activated protein kinase kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080219-34]
43. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.59 - - - - - 0.775 0.815 - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
44. polr1d ENSDARG00000037570 860 1.587 - 0.759 0.828 - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
45. hcfc1b ENSDARG00000012519 3633 1.585 - 0.753 - - - 0.832 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
46. tbc1d5 ENSDARG00000036212 2580 1.584 - - 0.822 - - 0.762 - - - TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
47. TBC1D13 815 1.579 - - 0.860 - - - 0.719 - - TBC1 domain family, member 13
48. tmem214 ENSDARG00000016968 3772 1.578 - - 0.837 - - - 0.741 - - transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
49. sin3ab ENSDARG00000059812 2140 1.576 - - - - - 0.802 0.774 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
50. BX571712.1 ENSDARG00000097833 764 1.561 - - - 0.739 - - 0.822 - -
51. TMEM186 ENSDARG00000074264, ENSDARG00000109974 245 1.56 - 0.737 - - - - 0.823 - - transmembrane protein 186 [Source:ZFIN;Acc:ZDB-GENE-081022-122]
52. rangap1a ENSDARG00000041317 1456 1.552 - - - - - 0.798 0.754 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
53. RBM12B ENSDARG00000079717 541 1.551 - - - - - 0.799 0.752 - - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
54. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.548 - 0.746 - - - - 0.802 - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
55. aplnrb ENSDARG00000036670 546 1.536 - 0.714 - - - - 0.822 - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
56. PPFIBP1_2 PPFIBP1_2 1274 1.527 - - - - - 0.701 0.826 - -
57. TULP3 TULP3 433 1.523 - 0.798 - - - 0.725 - - -
58. kif5bb 1645 1.522 - 0.718 - - - - 0.804 - - kinesin family member 5B, b
59. C22H10orf76 C22H10orf76 1103 1.517 - 0.702 - - - 0.815 - - -
60. b4galt7 ENSDARG00000021899 546 1.517 - 0.716 - - - 0.801 - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
61. rerea ENSDARG00000077353 4162 1.511 - - 0.773 - - 0.738 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
62. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.508 - - - - - 0.740 0.768 - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
63. hoxc6b ENSDARG00000101954 967 1.501 - - - - - 0.736 0.765 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
64. sae1 ENSDARG00000010487 2028 1.499 - - 0.761 - - 0.738 - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
65. LSM5 ENSDARG00000071573 371 1.499 - 0.704 - - - 0.795 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
66. rcc1 ENSDARG00000037158 1165 1.494 - - - - - 0.704 0.790 - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
67. si:rp71-36a1.2 ENSDARG00000093686 81 1.494 - - - - - 0.748 0.746 - - si:rp71-36a1.2 [Source:ZFIN;Acc:ZDB-GENE-050208-646]
68. tenm1 ENSDARG00000003403 148 1.481 - 0.752 - - - 0.729 - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
69. dgat1b ENSDARG00000054914 119 1.479 - - - - - 0.716 0.763 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
70. CELF6 ENSDARG00000101933 228 1.475 - - - 0.705 - 0.770 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
71. TMEM185A TMEM185A 5505 1.475 0.701 - - - - 0.774 - - -
72. CR382298.3 CR382298.3 666 1.47 - - - 0.712 - 0.758 - - -
73. exoc3l4 ENSDARG00000058180 923 1.464 - - - 0.715 - 0.749 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
74. si:dkeyp-53d3.6 204 1.464 - - - 0.724 - 0.740 - - - si:dkeyp-53d3.6, transcript variant X1
75. MRPL52 ENSDARG00000090568 4402 1.459 - 0.721 0.738 - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
76. phf3 ENSDARG00000034768 1372 1.455 0.704 - - - - 0.751 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
77. myo1b ENSDARG00000024694 1761 1.455 - - - - - 0.735 0.720 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
78. nr2f6a ENSDARG00000003607 4779 1.449 - - 0.737 - - - 0.712 - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
79. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.444 - - 0.735 - - 0.709 - - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
80. zc3h15 ENSDARG00000015889 3861 1.434 - - 0.725 - - - 0.709 - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
81. snx29 ENSDARG00000077317 239 1.43 - - - - - 0.728 0.702 - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
82. rnd3a ENSDARG00000076799 4705 1.418 - 0.706 0.712 - - - - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
83. CDC42BPA CDC42BPA 295 0.956 - - - - - 0.956 - - -
84. lhfp 700 0.943 - - 0.943 - - - - - - lipoma HMGIC fusion partner
85. iah1 ENSDARG00000015765 326 0.937 - - - - - 0.937 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
86. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 0.935 - - - - - 0.935 - - - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
87. shox2 ENSDARG00000075713 104 0.932 - - - - - 0.932 - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
88. ATF6B 960 0.931 - - 0.931 - - - - - - activating transcription factor 6 beta
89. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.931 - - 0.931 - - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
90. cdk12 ENSDARG00000063726 1220 0.929 - - - - - 0.929 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
91. commd3 ENSDARG00000045402 1601 0.928 - - - - - 0.928 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
92. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.927 - - - - - 0.927 - - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
93. timm50 ENSDARG00000031098, ENSDARG00000109900 988 0.927 - - - - - - 0.927 - - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
94. rcbtb2 ENSDARG00000090687 1658 0.926 - - 0.926 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
95. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 0.925 - - 0.925 - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
96. SCARF2 1117 0.924 - - 0.924 - - - - - - scavenger receptor class F, member 2
97. rnf114 ENSDARG00000009886 725 0.924 - - 0.924 - - - - - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
98. BX649554.3_1 BX649554.3_1 1071 0.923 - - 0.923 - - - - - -
99. ildr2 ENSDARG00000014180 791 0.922 - - - - - 0.922 - - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
100. arhgap29b ENSDARG00000017748 812 0.922 - - 0.922 - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]

There are 1958 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA