Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rfx3

Gene Name Gene ID Reads Annotation
rfx3 ENSDARG00000014550 2 regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]










Genes with expression patterns similar to rfx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx3 ENSDARG00000014550 2 3 - - 1.000 1.000 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
2. si:dkey-276l13.5 si:dkey-276l13.5 3 1.941 - - - 0.941 1.000 - - - -
3. ATP9A ENSDARG00000115869 9 1.699 - - 0.791 - 0.908 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
4. si:ch211-212n6.18 si:ch211-212n6.18 233 1.54 - - 0.817 - 0.723 - - - -
5. U1_3 U1_3 1 1 - - - 1.000 - - - - -
6. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
7. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
8. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
9. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
10. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
11. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
12. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
13. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
14. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
15. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
16. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
17. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
18. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
19. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
20. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
21. zgc:162872 ENSDARG00000012184 1 1 - - - - 1.000 - - - - zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]
22. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
23. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
24. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
25. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
26. U1_15 U1_15 1 1 - - - - 1.000 - - - -
27. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
28. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
29. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
30. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
31. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
32. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
33. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
34. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
35. BX000442.2 BX000442.2 8 1 - - - - 1.000 - - - -
36. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
37. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
38. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
39. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
40. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
41. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
42. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
43. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
44. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
45. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
46. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
47. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
48. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
49. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
50. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
51. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
52. BIN1 BIN1 11 1 - - - - 1.000 - - - -
53. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
54. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
55. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
56. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
57. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
58. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
59. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
60. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
61. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
62. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
63. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
64. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
65. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
66. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
67. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
68. wibg wibg 2 1 - - - - 1.000 - - - -
69. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
70. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
71. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
72. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
73. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
74. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
75. MOB2 MOB2 4 1 - - - - 1.000 - - - -
76. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
77. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
78. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
79. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
80. ido1 ENSDARG00000033594 0 1 - - - - 1.000 - - - - indoleamine 2,3-dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-080228-2]
81. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
82. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
83. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
84. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
85. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
86. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
87. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
88. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
89. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
90. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
91. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
92. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
93. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
94. F13A1 F13A1 1 1 - - - - 1.000 - - - -
95. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
96. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
97. CU570981.1 CU570981.1 9 1 - - - - 1.000 - - - -
98. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
99. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
100. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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