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Results for rfx3

Gene Name Gene ID Reads Annotation
rfx3 ENSDARG00000014550 2 regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]










Genes with expression patterns similar to rfx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rfx3 ENSDARG00000014550 2 3 - - 1.000 1.000 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
2. si:dkey-276l13.5 si:dkey-276l13.5 3 1.941 - - - 0.941 1.000 - - - -
3. ATP9A ENSDARG00000115869 9 1.699 - - 0.791 - 0.908 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
4. si:ch211-212n6.18 si:ch211-212n6.18 233 1.54 - - 0.817 - 0.723 - - - -
5. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
6. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
7. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
8. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
9. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
10. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
11. U1_3 U1_3 1 1 - - - 1.000 - - - - -
12. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
13. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
14. wibg wibg 2 1 - - - - 1.000 - - - -
15. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
16. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
17. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
18. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
19. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
20. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
21. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
22. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
23. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
24. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
25. F13A1 F13A1 1 1 - - - - 1.000 - - - -
26. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
27. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
28. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
29. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
30. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
31. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
32. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
33. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
34. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
35. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
36. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
37. ODF2 ODF2 6 1 - - - - 1.000 - - - -
38. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
39. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
40. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
41. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
42. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
43. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
44. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
45. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
46. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
47. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
48. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
49. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
50. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
51. si:ch211-3o3.7 si:ch211-3o3.7 0 1 - - - - 1.000 - - - -
52. MOB2 MOB2 4 1 - - - - 1.000 - - - -
53. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
54. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
55. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
56. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
57. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
58. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
59. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
60. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
61. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
62. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
63. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
64. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
65. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
66. C2 C2 5 1 - - - 1.000 - - - - -
67. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
68. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
69. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
70. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
71. U1_15 U1_15 1 1 - - - - 1.000 - - - -
72. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
73. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
74. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
75. si:dkey-27p18.6 4 1 - - - - 1.000 - - - - si:dkey-27p18.6, transcript variant X1
76. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
77. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
78. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
79. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
80. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
81. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
82. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
83. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
84. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
85. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
86. BIN1 BIN1 11 1 - - - - 1.000 - - - -
87. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
88. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
89. mlxip ENSDARG00000059474 12 1 - - - - 1.000 - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
90. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
91. CST7 CST7 22 1 - - - - 1.000 - - - -
92. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
93. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
94. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
95. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
96. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
97. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
98. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
99. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
100. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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