Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rasgef1bb

Gene Name Gene ID Reads Annotation
rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]










Genes with expression patterns similar to rasgef1bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
2. nrg1 ENSDARG00000104314 1081 2.657 - - - 0.847 - 0.868 - - 0.942 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
3. BX569781.3 BX569781.3 576 2.449 0.725 0.780 - - - - - - 0.944
4. mid1ip1b ENSDARG00000019302 1589 2.352 - - - - - 0.794 0.701 - 0.857 MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
5. sema4e ENSDARG00000052997 607 2.269 - 0.705 - 0.838 - - 0.726 - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
6. C25H12orf4 C25H12orf4 317 1.832 - 0.875 - - - - - - 0.957
7. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.827 - - - 0.869 - - - - 0.958 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
8. cldnf ENSDARG00000043133 1006 1.827 - - - - - 0.955 - - 0.872 claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
9. FUZ ENSDARG00000079730 821 1.815 - - - - - 0.864 - - 0.951 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
10. CABZ01008011.1 CABZ01008011.1 761 1.794 - - - - - 0.857 - - 0.937
11. SLC22A15 ENSDARG00000055445 111 1.789 - 0.872 - - - 0.917 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
12. mov10b.1 ENSDARG00000061177 370 1.786 - - - 0.850 - - - - 0.936 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
13. btbd9 ENSDARG00000068983 356 1.777 - 0.870 - - - 0.907 - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
14. THEM6_1 ENSDARG00000103914 469 1.772 - 0.862 - - - 0.910 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
15. GDPD2 ENSDARG00000073870 229 1.772 - 0.853 - - - 0.919 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
16. cux1b ENSDARG00000043134 641 1.77 - 0.866 - - - 0.904 - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
17. nudt15 ENSDARG00000113961 381 1.768 - 0.828 - - - - - - 0.940 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
18. hiat1a ENSDARG00000013117 607 1.767 - - - 0.903 - 0.864 - - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
19. yif1a ENSDARG00000019636 2215 1.765 - - - - - 0.875 - - 0.890 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
20. kif3b ENSDARG00000101120 1158 1.763 - 0.857 - - - - - - 0.906 kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
21. itsn1 ENSDARG00000000086 684 1.762 - 0.882 - - - 0.880 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
22. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.76 - - - 0.851 - 0.909 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
23. rassf9 ENSDARG00000074721 448 1.758 - - - 0.881 - 0.877 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
24. prpf6 ENSDARG00000091367 1868 1.751 - - - 0.849 - - - - 0.902 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
25. mogat3b ENSDARG00000003635 394 1.748 - 0.854 - - - 0.894 - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
26. TTF1_1 TTF1_1 299 1.745 - 0.876 - 0.869 - - - - -
27. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.742 - - - - - 0.809 - - 0.933 mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
28. fkbp2 ENSDARG00000044540 1615 1.739 - - - - - 0.879 - - 0.860 FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
29. HOOK3 ENSDARG00000114329 1980 1.738 - - - - - 0.887 - - 0.851 hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
30. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.737 - - - 0.815 - - - - 0.922 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
31. chmp5b ENSDARG00000103718 1608 1.733 - - - - - 0.910 - - 0.823 charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
32. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.731 - - - 0.825 - - - - 0.906 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
33. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.719 - - - - - 0.778 - - 0.941 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
34. epn2 ENSDARG00000008377 5458 1.719 - - - - - 0.904 - - 0.815 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
35. klhl11 ENSDARG00000045130 800 1.699 - - - 0.788 - 0.911 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
36. arhgap29b ENSDARG00000017748 812 1.699 0.840 - - - - 0.859 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
37. brd8 ENSDARG00000025071 2605 1.698 - - - - - 0.810 - - 0.888 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
38. mapk13 ENSDARG00000058470 1001 1.696 - - - 0.842 - 0.854 - - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
39. dbnla ENSDARG00000008170 2129 1.696 - - - - - 0.946 - - 0.750 drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
40. BX321921.1 BX321921.1 525 1.695 - 0.818 - - - 0.877 - - -
41. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.691 - 0.837 - 0.854 - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
42. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.687 - - - - - 0.883 - - 0.804 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
43. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.683 - - - 0.766 - - - - 0.917 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
44. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.68 - - - 0.817 - 0.863 - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
45. nfu1 ENSDARG00000068125 1743 1.679 - - - - - - 0.727 - 0.952 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
46. si:dkey-117n7.3 ENSDARG00000092944 2518 1.673 - - - - - 0.809 - - 0.864 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
47. HYAL1 ENSDARG00000059916 134 1.672 - 0.849 - 0.823 - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
48. yeats4 ENSDARG00000045874 1168 1.668 - 0.781 - 0.887 - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
49. smarcd2 ENSDARG00000088877 416 1.665 - 0.724 - - - - - - 0.941 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
50. tp53i11b ENSDARG00000006025 569 1.662 - 0.703 - - - - - - 0.959 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
51. zgc:77391 zgc:77391 1445 1.662 - - - 0.808 - - - - 0.854
52. xrcc5_1 ENSDARG00000099298 1533 1.66 - 0.837 - - - - - - 0.823 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
53. mesdc2 776 1.654 - - - 0.738 - 0.916 - - - mesoderm development candidate 2, transcript variant X2
54. guk1a ENSDARG00000030340 517 1.654 - - - 0.814 - 0.840 - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
55. atl3 ENSDARG00000004270 2806 1.654 - - - 0.758 - 0.896 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
56. ptgs1 ENSDARG00000052148 2443 1.653 - - - - - - 0.704 - 0.949 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
57. slc25a44a ENSDARG00000045927 1067 1.65 - - - 0.814 - - 0.836 - - solute carrier family 25, member 44 a [Source:ZFIN;Acc:ZDB-GENE-041114-38]
58. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.649 - - - - - 0.714 - - 0.935 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
59. si:dkeyp-110g5.4 ENSDARG00000092482 249 1.649 - 0.738 - - - 0.911 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
60. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 1.646 - 0.764 - - - 0.882 - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
61. PVRL4_1 PVRL4_1 702 1.645 - 0.845 - - - 0.800 - - -
62. SEMA6B_1 SEMA6B_1 430 1.643 - 0.859 - 0.784 - - - - -
63. stard3 ENSDARG00000017809 727 1.643 - - - 0.776 - 0.867 - - - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
64. hat1 ENSDARG00000034916 5712 1.638 - 0.795 - - - - - - 0.843 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
65. aebp1 ENSDARG00000091726 906 1.638 - 0.712 - - - - - - 0.926 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
66. atg5 ENSDARG00000023396 1726 1.634 - 0.810 - - - 0.824 - - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
67. adhfe1 ENSDARG00000053518 499 1.63 - 0.758 - - - 0.872 - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
68. dus3l ENSDARG00000099528 1192 1.626 - - - 0.709 - - - - 0.917 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
69. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.62 - 0.730 - - - 0.890 - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
70. cdc123 ENSDARG00000075025 418 1.619 - 0.791 - 0.828 - - - - - cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]
71. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.619 - - - 0.791 - - - - 0.828 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
72. sptssa ENSDARG00000071203 2306 1.618 - - - 0.739 - 0.879 - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
73. slc39a10 ENSDARG00000005823 2634 1.617 - - - - - 0.852 0.765 - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
74. psd3l ENSDARG00000104820 1201 1.616 - - - 0.737 - - - - 0.879 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
75. vps37a ENSDARG00000017119, ENSDARG00000110505 772 1.611 - 0.850 - - - - 0.761 - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
76. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.601 - - - 0.754 - 0.847 - - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
77. nrg2a ENSDARG00000077818 854 1.591 - 0.713 - 0.878 - - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
78. pef1 ENSDARG00000023989 3013 1.589 - - - - - 0.869 - - 0.720 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
79. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.588 - 0.701 - - - 0.887 - - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
80. mettl3 ENSDARG00000012827 728 1.575 - 0.852 - 0.723 - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
81. bcas2 ENSDARG00000043631 1971 1.574 - - - - - 0.851 0.723 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
82. C21H5orf15 C21H5orf15 2318 1.565 0.734 - - - - - - - 0.831
83. sly1 sly1 2403 1.565 - - - 0.788 - 0.777 - - -
84. SNORA21 SNORA21 547 1.56 - - - 0.837 - - 0.723 - -
85. riok1 ENSDARG00000016399 936 1.552 - 0.782 - 0.770 - - - - - RIO kinase 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1927]
86. CCNYL1 ENSDARG00000099692 1330 1.546 - - - 0.765 - 0.781 - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
87. PPP4R1L ENSDARG00000099379 2132 1.544 - - - - - 0.812 0.732 - - protein phosphatase 4, regulatory subunit 1-like [Source:ZFIN;Acc:ZDB-GENE-121022-4]
88. fdx1l 461 1.544 - 0.813 - - - - 0.731 - - ferredoxin 1-like
89. tfam ENSDARG00000063145 4524 1.543 - 0.702 - - - 0.841 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
90. CABZ01057013.1 CABZ01057013.1 1308 1.54 - 0.704 - - - 0.836 - - -
91. pcmtd1 ENSDARG00000053152 564 1.537 - - - 0.779 - - 0.758 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5387]
92. PLEKHH3 ENSDARG00000070174 2117 1.535 - - - 0.742 - - - - 0.793 pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
93. rac2 ENSDARG00000038010 5837 1.532 - - - - - 0.768 - - 0.764 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
94. dbnlb ENSDARG00000016016 1412 1.522 - 0.730 - - - 0.792 - - - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
95. g2e3 ENSDARG00000001313 1485 1.512 - - - - - 0.728 - - 0.784 G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
96. tnikb ENSDARG00000009031 1836 1.512 - - - - - 0.801 - - 0.711 TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
97. myo6a ENSDARG00000044016 847 1.502 - - - 0.775 - 0.727 - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
98. slc20a1b ENSDARG00000010641 2564 1.501 - - 0.754 - - 0.747 - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
99. nfkbiz ENSDARG00000102097 218 1.494 0.717 0.777 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
100. six4.3 six4.3 492 1.49 - - - - - - 0.764 0.726 -

There are 1751 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA