Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for raph1

Gene Name Gene ID Reads Annotation
raph1 raph1 442










Genes with expression patterns similar to raph1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. raph1 raph1 442 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mapre1a ENSDARG00000042927 164 1.576 - 0.796 - - - 0.780 - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
3. kat6a ENSDARG00000018907 250 1.547 - 0.738 - - - 0.809 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
4. DIDO1 ENSDARG00000057940 312 1.53 - - - 0.788 - 0.742 - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
5. si:dkey-71b5.9 si:dkey-71b5.9 398 1.523 - 0.719 - - - 0.804 - - -
6. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 1.507 - 0.747 - - - - 0.760 - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
7. ube2j1 ENSDARG00000033489 497 1.505 - 0.765 - 0.740 - - - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
8. MDFIC ENSDARG00000074223 781 1.463 - 0.711 - - - 0.752 - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
9. si:dkey-10g2.5 si:dkey-10g2.5 72 1.455 - 0.717 - - - 0.738 - - -
10. CABZ01081749.1 CABZ01081749.1 637 1.424 - 0.718 - - - 0.706 - - -
11. REPS2 ENSDARG00000076768 564 0.915 - - - 0.915 - - - - - RALBP1 associated Eps domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130415-3]
12. itgb6 ENSDARG00000002494 559 0.914 - 0.914 - - - - - - - integrin, beta 6 [Source:ZFIN;Acc:ZDB-GENE-100812-2]
13. zgc:162344 ENSDARG00000070040 126 0.911 - - - - - 0.911 - - - zgc:162344 [Source:ZFIN;Acc:ZDB-GENE-030131-6058]
14. epsti1 ENSDARG00000094578 33 0.905 - - - - - 0.905 - - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
15. zgc:153738 ENSDARG00000069230 84 0.901 - - - - - 0.901 - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
16. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.893 - - - - - 0.893 - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
17. cdr2l ENSDARG00000026834 254 0.893 - - - - - 0.893 - - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
18. MAP7_1 MAP7_1 42 0.892 - - - - - 0.892 - - -
19. ssrp1b ENSDARG00000016994 58 0.89 - - - - - 0.890 - - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
20. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.887 - - - - - 0.887 - - - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
21. roraa ENSDARG00000031768 278 0.887 - - - - - 0.887 - - - RAR-related orphan receptor A, paralog a [Source:ZFIN;Acc:ZDB-GENE-060306-2]
22. srfbp1 ENSDARG00000075323 2262 0.884 - 0.884 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
23. si:dkey-34m19.3 ENSDARG00000078814 321 0.884 - - - - - 0.884 - - - si:dkey-34m19.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2206]
24. cdc23 ENSDARG00000044484 767 0.88 - - - - - 0.880 - - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
25. IP6K2 IP6K2 778 0.877 0.877 - - - - - - - -
26. pgap1 ENSDARG00000062465 30 0.874 - - - - - 0.874 - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
27. SLC44A1 SLC44A1 43 0.874 - - - - - 0.874 - - -
28. CABZ01020840.1 ENSDARG00000090401 263 0.873 - 0.873 - - - - - - - apoptosis facilitator Bcl-2-like protein 14 [Source:NCBI gene;Acc:101885512]
29. si:dkey-114c15.7 237 0.871 - - - - - 0.871 - - - si:dkey-114c15.7
30. adcy5 ENSDARG00000091342 122 0.87 - - - - - 0.870 - - - adenylate cyclase 5 [Source:ZFIN;Acc:ZDB-GENE-081104-470]
31. si:dkey-253d23.11 ENSDARG00000079236 128 0.87 - - - - - 0.870 - - - si:dkey-253d23.11 [Source:ZFIN;Acc:ZDB-GENE-050208-631]
32. CLIP4 ENSDARG00000096961 363 0.869 - - - - - 0.869 - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
33. ppp6r2b ENSDARG00000069654 323 0.869 - - - 0.869 - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
34. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 0.869 - - - - - 0.869 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
35. zgc:174178 zgc:174178 104 0.868 - - - - - 0.868 - - -
36. KCTD14 ENSDARG00000110240 122 0.867 - - - - - - 0.867 - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
37. BX649554.3_1 BX649554.3_1 1071 0.865 - - - - - 0.865 - - -
38. tbr1a ENSDARG00000076259 341 0.864 - - - - - 0.864 - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
39. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.863 - - - - - 0.863 - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
40. ZNF784_3 ZNF784_3 44 0.862 - - - - - 0.862 - - -
41. PFKL PFKL 9 0.86 - - - - - 0.860 - - -
42. POLR2H ENSDARG00000038505 2031 0.86 - 0.860 - - - - - - - info polymerase (RNA) II (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-050417-66]
43. KDM5A ENSDARG00000104567 450 0.86 - - - - - 0.860 - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
44. tbc1d2b ENSDARG00000061986 247 0.859 - - - - - 0.859 - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
45. BX571714.2 BX571714.2 1344 0.859 - 0.859 - - - - - - -
46. cops4 ENSDARG00000043732 1508 0.858 - 0.858 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
47. bcl6ab ENSDARG00000069295 656 0.858 - 0.858 - - - - - - - B-cell CLL/lymphoma 6a, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-7523]
48. tmem237b ENSDARG00000074248 139 0.858 - - - - - 0.858 - - - transmembrane protein 237b [Source:ZFIN;Acc:ZDB-GENE-040912-63]
49. SENP7 SENP7 1097 0.857 - 0.857 - - - - - - -
50. UBA6 UBA6 229 0.856 - - - - - 0.856 - - -
51. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 0.856 - - - 0.856 - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
52. sesn2 ENSDARG00000070012 294 0.856 - - - - - 0.856 - - - sestrin 2 [Source:ZFIN;Acc:ZDB-GENE-070108-1]
53. SEMA6B_1 SEMA6B_1 430 0.855 - 0.855 - - - - - - -
54. zgc:113227 ENSDARG00000058874 266 0.854 - - - - - 0.854 - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
55. usp10 ENSDARG00000103422 4247 0.854 - 0.854 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
56. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 0.854 - - - - - 0.854 - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
57. chsy1 ENSDARG00000079027 455 0.853 - - - 0.853 - - - - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
58. camk2b1 ENSDARG00000011065 79 0.852 - - - - - 0.852 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
59. PDXP ENSDARG00000109823 195 0.851 - - - - - 0.851 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
60. arntl1a ENSDARG00000006791 550 0.85 - 0.850 - - - - - - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
61. mapk6 ENSDARG00000032103 6422 0.85 - 0.850 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
62. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 0.85 - - - - - 0.850 - - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
63. rbbp5 ENSDARG00000042147 702 0.849 - 0.849 - - - - - - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
64. anxa13 ENSDARG00000013976 2476 0.849 - 0.849 - - - - - - - annexin A13 [Source:ZFIN;Acc:ZDB-GENE-010406-1]
65. dcps ENSDARG00000009862 571 0.848 - 0.848 - - - - - - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
66. zgc:171971 ENSDARG00000042054 388 0.848 - - - - - 0.848 - - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
67. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.847 - - - - - 0.847 - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
68. si:dkeyp-14d3.1 66 0.847 - - - - - 0.847 - - - si:dkeyp-14d3.1, transcript variant X4
69. si:dkey-220o10.1 si:dkey-220o10.1 63 0.847 - - - - - 0.847 - - -
70. UNC13C 119 0.847 - - - - - 0.847 - - - unc-13 homolog C (C. elegans)
71. FAM120A ENSDARG00000075021 73 0.846 - - - - - 0.846 - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
72. STXBP6 ENSDARG00000088862 988 0.846 - 0.846 - - - - - - - syntaxin binding protein 6 (amisyn) [Source:ZFIN;Acc:ZDB-GENE-040625-31]
73. sptssb ENSDARG00000091658 42 0.845 - - - - - 0.845 - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
74. ezh2 ENSDARG00000010571 3273 0.844 - 0.844 - - - - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
75. RNF4 ENSDARG00000090993 688 0.844 - 0.844 - - - - - - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
76. gfra4 gfra4 287 0.844 - - - - - 0.844 - - -
77. otx2 766 0.843 - - - - - 0.843 - - - orthodenticle homeobox 2, transcript variant X2
78. adcyap1a ENSDARG00000004015 67 0.843 - - - - - 0.843 - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
79. fosl1a ENSDARG00000015355 139 0.843 - - - - - 0.843 - - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
80. NSUN6 ENSDARG00000103478 29 0.843 - - - - - 0.843 - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
81. si:dkey-11f4.14 ENSDARG00000098461 35 0.843 - - - - - 0.843 - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
82. PTPDC1_1 PTPDC1_1 12 0.843 - - - - - 0.843 - - -
83. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 0.843 - - - - - 0.843 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
84. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.843 - 0.843 - - - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
85. memo1 ENSDARG00000010823 1681 0.842 - 0.842 - - - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
86. angpt1 ENSDARG00000030364 588 0.84 - 0.840 - - - - - - - angiopoietin 1 [Source:ZFIN;Acc:ZDB-GENE-010817-1]
87. nle1 ENSDARG00000057105 522 0.839 - 0.839 - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
88. FAM210A FAM210A 437 0.839 - 0.839 - - - - - - -
89. SNORD27 SNORD27 181 0.838 - - - - - 0.838 - - -
90. tnxb 30 0.838 - - - - - 0.838 - - - tenascin XB
91. gramd1a ENSDARG00000076689 1148 0.837 - 0.837 - - - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
92. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.837 - 0.837 - - - - - - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
93. nfkbil1 ENSDARG00000003157 78 0.836 - - - - - 0.836 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040116-7]
94. RCVRN RCVRN 66 0.836 - - - - - 0.836 - - -
95. rbm22 ENSDARG00000010238 523 0.835 - 0.835 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
96. mrps23 ENSDARG00000033973 2265 0.835 - - - 0.835 - - - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
97. rrp15 ENSDARG00000013478 1126 0.835 - 0.835 - - - - - - - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
98. dennd6b ENSDARG00000011605 412 0.834 - - - - - 0.834 - - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
99. luc7l ENSDARG00000055903 3357 0.833 - 0.833 - - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
100. slc7a3a ENSDARG00000020645 1458 0.832 0.832 - - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA