Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab5b

Gene Name Gene ID Reads Annotation
rab5b ENSDARG00000016059, ENSDARG00000114966 1252 RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]










Genes with expression patterns similar to rab5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
2. rab5c ENSDARG00000026712 4733 2.524 0.793 - - - 0.952 - 0.779 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
3. PTDSS2 ENSDARG00000101018 881 2.375 0.847 - - - - 0.730 0.798 - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
4. pard6a ENSDARG00000069378, ENSDARG00000115700 665 2.333 0.731 0.797 - - - - 0.805 - - par-6 family cell polarity regulator alpha [Source:ZFIN;Acc:ZDB-GENE-070705-215]
5. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 2.328 0.783 - - - - - 0.842 0.703 - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
6. ncoa2 ENSDARG00000017929 2520 2.279 0.764 - - - - 0.755 0.760 - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
7. jagn1b ENSDARG00000014995 2063 1.866 0.893 - - - 0.973 - - - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
8. cables2a ENSDARG00000076964 1330 1.855 - 0.874 - - 0.981 - - - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
9. cyp2aa4 ENSDARG00000098803 1762 1.821 - - - - 0.965 - 0.856 - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
10. lum ENSDARG00000045580 5395 1.812 0.838 - - - 0.974 - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
11. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.804 - - - - 0.985 0.819 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
12. MANBAL ENSDARG00000059853 636 1.798 - - - - 0.991 0.807 - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
13. pip5k2 pip5k2 5743 1.792 0.874 - - - 0.918 - - - -
14. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.788 - - - - 0.954 0.834 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
15. zgc:110239 ENSDARG00000077664 7015 1.782 - - - - 0.985 - 0.797 - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
16. slmapa ENSDARG00000054458 966 1.776 0.875 - - - 0.901 - - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
17. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 1.761 - 0.781 - - 0.980 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
18. bmi1a ENSDARG00000006010 2061 1.741 - - - - 0.987 - 0.754 - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
19. exoc3l4 ENSDARG00000058180 923 1.729 0.740 - - - 0.989 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
20. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.699 0.717 - - - 0.982 - - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
21. CR759921.2 CR759921.2 583 1.693 - - - - 0.987 0.706 - - -
22. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.685 0.877 - - - - - 0.808 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
23. znf598 ENSDARG00000014945 1838 1.684 0.871 - - - - - 0.813 - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
24. nckap1 ENSDARG00000060853 3540 1.678 0.721 - - - 0.957 - - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
25. ctsf ENSDARG00000063095 4564 1.664 - 0.838 - - - - 0.826 - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
26. rassf10a 417 1.66 0.758 - - - - 0.902 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
27. plod1a ENSDARG00000059746 3364 1.659 0.704 - - - 0.955 - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
28. lin7c ENSDARG00000027322 3083 1.653 - 0.856 - - - 0.797 - - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
29. C18H12orf23 C18H12orf23 5362 1.642 - 0.760 - - 0.882 - - - -
30. itpkcb ENSDARG00000067741 2370 1.641 0.835 - - - - 0.806 - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
31. elovl7b ENSDARG00000100185 2032 1.639 0.787 0.852 - - - - - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
32. rdh5 ENSDARG00000008306 272 1.635 0.887 - - - - - 0.748 - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
33. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.634 0.804 0.830 - - - - - - - ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
34. s100z ENSDARG00000038729 442 1.632 0.898 - - - - - 0.734 - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
35. lipin2 2021 1.622 - 0.803 - - - 0.819 - - - lipin 2, transcript variant X2
36. lrpprc ENSDARG00000043970 3847 1.617 - - - - 0.875 0.742 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
37. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.616 - 0.811 - - - - 0.805 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
38. prrg4 ENSDARG00000030753 1008 1.615 0.768 - - - - - 0.847 - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
39. wdr91 ENSDARG00000015153 388 1.614 0.831 - - - - 0.783 - - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
40. dsc2l ENSDARG00000039677 2747 1.6 0.853 - - - - - 0.747 - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
41. stx2b ENSDARG00000068217 2567 1.592 0.758 - - - - - 0.834 - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
42. COL4A3BP COL4A3BP 3288 1.589 0.805 - - - - - 0.784 - -
43. copz1 ENSDARG00000017844 7277 1.588 0.864 - - - - - 0.724 - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
44. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.588 0.843 - - - - - 0.745 - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
45. si:dkey-58f10.12 ENSDARG00000092680 258 1.584 0.822 - - - - - 0.762 - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
46. prkci ENSDARG00000021225 2472 1.581 0.836 - - - - - 0.745 - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
47. akap7 ENSDARG00000043843 3596 1.581 0.750 - - - - - 0.831 - - A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
48. zgc:158309 zgc:158309 2696 1.579 0.858 - - - - - 0.721 - -
49. ACTR3 ENSDARG00000091138 1739 1.575 0.852 - - - - - 0.723 - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
50. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 1.572 0.791 - - - - - 0.781 - - Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
51. etfdh ENSDARG00000038834 1811 1.566 0.778 - - - - 0.788 - - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
52. raraa ENSDARG00000056783 1404 1.557 - 0.838 - - - - 0.719 - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
53. esrrgb ENSDARG00000011696 108 1.556 0.823 - - - - - 0.733 - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
54. CU633910.1 CU633910.1 828 1.552 - 0.712 - - - - 0.840 - -
55. hps3 ENSDARG00000015749 481 1.549 0.775 - - - - - 0.774 - - Hermansky-Pudlak syndrome 3 [Source:ZFIN;Acc:ZDB-GENE-061110-115]
56. coro1b ENSDARG00000008660 1220 1.542 - - - - - 0.747 0.795 - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
57. patl1 ENSDARG00000017423 2744 1.537 0.810 - - - - 0.727 - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
58. ctnna1 ENSDARG00000102441 7984 1.528 - - - - - 0.786 0.742 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
59. zgc:85975 4738 1.528 0.714 0.814 - - - - - - - zgc:85975
60. GPA33 2465 1.526 0.759 - - - - - 0.767 - - glycoprotein A33 (transmembrane)
61. arcn1a ENSDARG00000002792 2847 1.526 0.787 0.739 - - - - - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
62. atp8a2 ENSDARG00000077492 3637 1.526 0.805 - - - - - 0.721 - - ATPase phospholipid transporting 8A2 [Source:ZFIN;Acc:ZDB-GENE-100209-2]
63. SMAD4 SMAD4 3233 1.521 0.745 - - - - - 0.776 - -
64. PIK3CA_1 PIK3CA_1 4065 1.52 0.781 0.739 - - - - - - -
65. tgfbr2 tgfbr2 1117 1.518 0.801 - - - - 0.717 - - -
66. CABZ01073174.1 CABZ01073174.1 581 1.515 0.781 - - - - 0.734 - - -
67. zgc:55512 zgc:55512 4436 1.509 0.782 0.727 - - - - - - -
68. ctsc ENSDARG00000101334 3691 1.509 - - - - 0.807 - 0.702 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
69. atp6v0b ENSDARG00000031681 4611 1.506 - 0.726 - - - - 0.780 - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
70. anxa5b ENSDARG00000016470 2934 1.494 0.760 - - - - - 0.734 - - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
71. BX957362.1 ENSDARG00000105682 1941 1.493 - 0.730 - - - - 0.763 - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
72. b3gnt2l ENSDARG00000068219 1875 1.493 0.701 - - - - - 0.792 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
73. gab1 ENSDARG00000037018 1489 1.489 0.731 - - - - 0.758 - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
74. ankrd54 ENSDARG00000055743 1575 1.487 0.759 0.728 - - - - - - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
75. uap1 ENSDARG00000052170 1168 1.485 - 0.727 - - - - 0.758 - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
76. ugt1b4 ENSDARG00000097024 1848 1.475 - 0.738 - - - - 0.737 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
77. slc7a8a ENSDARG00000075831 2987 1.461 0.708 - - - - - 0.753 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
78. snx7 ENSDARG00000105185 2977 1.456 - 0.707 - - - 0.749 - - - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
79. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.452 0.751 - - - - 0.701 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
80. shc1 ENSDARG00000075437 3278 1.441 0.727 - - - - - 0.714 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
81. BX296557.2 BX296557.2 1083 1.431 0.709 0.722 - - - - - - -
82. golga7 ENSDARG00000057676 4691 1.404 - 0.703 - - - - 0.701 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
83. slc2a15b ENSDARG00000053269 899 0.992 - - - - 0.992 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
84. ccr10 ENSDARG00000040643 255 0.992 - - - - 0.992 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
85. med13b ENSDARG00000003910 1143 0.992 - - - - 0.992 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
86. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.991 - - - - 0.991 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
87. bloc1s3 ENSDARG00000068828 502 0.991 - - - - 0.991 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
88. fut8 fut8 652 0.991 - - - - 0.991 - - - -
89. pfkpb ENSDARG00000012801 223 0.991 - - - - 0.991 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
90. fam193b ENSDARG00000102831 442 0.991 - - - - 0.991 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
91. aspg ENSDARG00000052942 1406 0.991 - - - - 0.991 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
92. larp7 ENSDARG00000017315 1194 0.991 - - - - 0.991 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
93. FOXL2 239 0.991 - - - - 0.991 - - - - forkhead box L2, transcript variant X1
94. gorab ENSDARG00000042031 483 0.991 - - - - 0.991 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
95. myl2b ENSDARG00000053424 226 0.991 - - - - 0.991 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
96. cuedc2 ENSDARG00000039365 484 0.991 - - - - 0.991 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
97. ccdc28b ENSDARG00000011222 528 0.99 - - - - 0.990 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
98. wdr24 ENSDARG00000025507 505 0.99 - - - - 0.990 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
99. dopey1 438 0.99 - - - - 0.990 - - - - dopey family member 1, transcript variant X4
100. lig4 ENSDARG00000060620 369 0.99 - - - - 0.990 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]

There are 1190 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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