Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab42a

Gene Name Gene ID Reads Annotation
rab42a ENSDARG00000034215 692 RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]










Genes with expression patterns similar to rab42a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab42a ENSDARG00000034215 692 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
2. CDH12_1 CDH12_1 57 2.86 - 1.000 - - - - 0.980 0.880 -
3. snap25b ENSDARG00000058117 469 2.6 - - - 0.908 - 0.790 - 0.902 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
4. npdc1 npdc1 221 2.546 - - - - - 0.772 0.887 0.887 -
5. GABRG1 ENSDARG00000101995 201 1.917 - 1.000 - - - 0.917 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
6. napgl napgl 39 1.84 - - - - - - 0.960 0.880 -
7. atr ENSDARG00000079625 231 1.793 - - - 0.804 - - 0.989 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
8. foxl2 61 1.792 - - - - - - 0.861 0.931 - forkhead box L2, transcript variant X1
9. grin1a ENSDARG00000027828 1327 1.792 - - - - - 0.793 - - 0.999 glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
10. CR376785.2 CR376785.2 175 1.769 - - - - - 0.860 - 0.909 -
11. serp2 ENSDARG00000094003 64 1.761 - - - - - 0.988 0.773 - - stress-associated endoplasmic reticulum protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-081104-143]
12. pitx2 ENSDARG00000036194 2279 1.755 - - - - - - - 0.760 0.995 paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
13. isl2b ENSDARG00000053499 132 1.74 - - - 0.828 - 0.912 - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
14. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1.737 - - - - - - 0.857 0.880 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
15. c1ql3b ENSDARG00000028521, ENSDARG00000036483 40 1.728 - 1.000 - - - - 0.728 - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
16. pdrg1 ENSDARG00000045017 628 1.723 - - - 0.852 - - - 0.871 - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
17. si:ch73-196i15.3 ENSDARG00000094281 1005 1.721 - 0.743 - - - - 0.978 - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
18. galnt13 ENSDARG00000099227 1059 1.716 - - - - - 0.806 - 0.910 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
19. USH1G USH1G 25 1.707 - 0.712 - - - - 0.995 - -
20. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1.707 - 0.712 - - - - 0.995 - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
21. CBFA2T3 ENSDARG00000079012 6799 1.688 - - - - - 0.761 - - 0.927 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
22. scrt2 ENSDARG00000056175 4331 1.685 0.713 - - - - - - - 0.972 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
23. CABZ01088365.1 CABZ01088365.1 66 1.685 - 0.712 - - - - 0.973 - -
24. trim35-27 ENSDARG00000035009 62 1.672 - 0.712 - - - - 0.960 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
25. apba1b ENSDARG00000074328 254 1.67 - - - - - 0.771 - 0.899 - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
26. celf4 ENSDARG00000070045 1537 1.67 - 0.905 - - - 0.765 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
27. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 1.655 - - - - - 0.731 0.924 - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
28. ankrd46b ENSDARG00000015780 213 1.653 - - - - - 0.812 - 0.841 - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
29. gng8 ENSDARG00000042970 117 1.652 - - - - - - 0.799 0.853 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
30. mapre3a ENSDARG00000020231 100 1.649 - - - - - 0.766 - 0.883 - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
31. mov10b.1 ENSDARG00000061177 370 1.644 - 0.864 - 0.780 - - - - - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
32. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.641 - - - - - 0.817 0.824 - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
33. CR848836.6 CR848836.6 93 1.64 - 0.712 - - - - 0.928 - -
34. CU074314.1 CU074314.1 354 1.632 - - - 0.783 - - - 0.849 -
35. slc1a3b ENSDARG00000043148 431 1.628 - 0.712 - - - 0.916 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
36. tmie ENSDARG00000069423 305 1.627 - - - 0.779 - 0.848 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
37. sdccag3 239 1.621 - 0.718 - - - - 0.903 - - serologically defined colon cancer antigen 3, transcript variant X2
38. isl1 ENSDARG00000004023 981 1.613 - 0.908 - 0.705 - - - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
39. rcv1 rcv1 77 1.604 - 0.712 - - - - - 0.892 -
40. cers6 ENSDARG00000053583 247 1.602 - 0.797 - - - - - 0.805 - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
41. pitpnab ENSDARG00000044091 306 1.594 - - - - - 0.784 - 0.810 - phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]
42. kif5c ENSDARG00000076027 424 1.593 - 0.752 - - - 0.841 - - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
43. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.586 - - - - - - 0.795 0.791 - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
44. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.581 0.705 - - - - 0.876 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
45. dpysl5b ENSDARG00000059311 600 1.574 - 0.749 - - - 0.825 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
46. TUSC3 ENSDARG00000078854 1021 1.57 - - - - - 0.864 - 0.706 - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
47. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.569 - - - 0.778 - 0.791 - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
48. pou4f1 ENSDARG00000005559 821 1.568 - - - 0.793 - 0.775 - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
49. LMTK3 LMTK3 222 1.567 0.701 - - - - 0.866 - - -
50. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.565 0.732 - - - - 0.833 - - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
51. SYNDIG1 ENSDARG00000100751 165 1.563 - 0.712 - - - 0.851 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
52. kif26aa ENSDARG00000042368 674 1.562 - - - 0.758 - 0.804 - - - kinesin family member 26Aa [Source:ZFIN;Acc:ZDB-GENE-041001-148]
53. dync2i1 dync2i1 83 1.554 0.718 0.836 - - - - - - -
54. PPP2R5B ENSDARG00000054931 213 1.554 - 0.712 - - - 0.842 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
55. tagln3a ENSDARG00000079805 123 1.544 0.742 - - - - 0.802 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
56. stim1b ENSDARG00000061560 146 1.543 - - - 0.802 - - 0.741 - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
57. tmem68 ENSDARG00000086737 209 1.538 - - - - - 0.716 - 0.822 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
58. sox1b ENSDARG00000008131 379 1.537 - - - - - 0.814 - 0.723 - SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]
59. CABZ01054965.1 ENSDARG00000090844 74 1.532 - 0.705 - 0.827 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
60. lhfpl4a ENSDARG00000111810 206 1.531 0.810 - - - - 0.721 - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
61. bccip ENSDARG00000004948 593 1.529 - - - 0.757 - - - 0.772 - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
62. SPOCK1 ENSDARG00000074644 794 1.528 - 0.735 - - - 0.793 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
63. CU928220.1 CU928220.1 146 1.525 - 0.712 - 0.813 - - - - -
64. vax2 ENSDARG00000058702 175 1.525 - 0.712 - - - - 0.813 - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
65. EPB41L1 EPB41L1 1896 1.522 - 0.774 - - - 0.748 - - -
66. sall3b ENSDARG00000057586 982 1.519 - 0.731 - - - 0.788 - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
67. cspg5b ENSDARG00000099793 67 1.518 - 0.712 - - - 0.806 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
68. fam102bb ENSDARG00000002333 1483 1.517 - - - - - 0.785 - 0.732 - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
69. RNF208 ENSDARG00000078056 60 1.517 0.767 - - - - 0.750 - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
70. neurog1 ENSDARG00000056130 3924 1.515 0.715 - - - - 0.800 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
71. msi1 ENSDARG00000010710 2634 1.515 0.714 - - - - 0.801 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
72. GIPC3 ENSDARG00000053074 182 1.515 - 0.732 - - - - - 0.783 - GIPC PDZ domain containing family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-326]
73. lzts3b ENSDARG00000058558 166 1.512 - 0.718 - - - 0.794 - - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
74. cadpsb ENSDARG00000070567 458 1.511 0.729 - - - - 0.782 - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
75. ctnnd2b ENSDARG00000003779 964 1.507 - 0.735 - - - 0.772 - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
76. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.507 0.703 - - - - 0.804 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
77. nlgn3b ENSDARG00000062376 171 1.494 0.718 - - - - 0.776 - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
78. GRIN3A ENSDARG00000075802 27 1.49 - 0.712 - - - 0.778 - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
79. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1.486 - 0.712 - - - - 0.774 - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
80. AGO1 ENSDARG00000092644 4521 1.48 0.735 - - - - 0.745 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
81. mapk11 ENSDARG00000045836 846 1.471 0.764 - - - - 0.707 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
82. si:ch211-120c15.3 ENSDARG00000101807 19 1.467 0.755 0.712 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
83. lrrn3 lrrn3 137 1.464 0.752 0.712 - - - - - - -
84. ctnna2 ENSDARG00000024785 968 1.46 0.730 - - - - - - 0.730 - catenin (cadherin-associated protein), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060815-3]
85. ankrd45 ENSDARG00000011326 62 1.459 - 0.712 - - - - 0.747 - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
86. tmem136a ENSDARG00000024920 535 1.457 0.740 - 0.717 - - - - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
87. PAXBP1 ENSDARG00000062361 626 1.455 - - - 0.709 - - - 0.746 - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
88. b3gat2 ENSDARG00000030733 348 1.452 - 0.712 - - - 0.740 - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
89. pcdh8 ENSDARG00000006467 317 1.451 - 0.712 - - - 0.739 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
90. tox3 ENSDARG00000073957 3075 1.443 0.714 - - - - 0.729 - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
91. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 1.443 0.739 - - - - - 0.704 - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
92. fgf13b ENSDARG00000056633 455 1.44 0.715 - - - - 0.725 - - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
93. polg ENSDARG00000060951 33 1.43 0.718 0.712 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
94. ncam2 ENSDARG00000017466 175 1.43 0.718 0.712 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
95. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.43 0.716 - - - - 0.714 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
96. lhfpl3 ENSDARG00000021595 107 1.427 0.717 - - - - - 0.710 - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
97. gria4a ENSDARG00000037496 88 1.416 0.704 0.712 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
98. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - 1.000 - - - - - - -
99. ARSJ ENSDARG00000077590 684 1 - - - - - - - - 1.000 arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
100. fam49a ENSDARG00000006672 939 1 - - - - - - - - 1.000 family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]

There are 1773 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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