Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab40b

Gene Name Gene ID Reads Annotation
rab40b ENSDARG00000042410, ENSDARG00000110455 121 RAB40B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-257]










Genes with expression patterns similar to rab40b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab40b ENSDARG00000042410, ENSDARG00000110455 121 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB40B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-257]
2. CMTM8_1 CMTM8_1 123 1.595 - 0.848 - - - 0.747 - - -
3. nrn1b ENSDARG00000042656 44 1.584 - 0.787 0.797 - - - - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
4. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.576 0.729 0.847 - - - - - - -
5. kcnq2a ENSDARG00000075307 7 1.576 0.729 0.847 - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
6. KCNJ12 KCNJ12 17 1.576 0.729 0.847 - - - - - - -
7. rad51d ENSDARG00000026400 108 1.571 0.727 - - - - 0.844 - - - RAD51 paralog D [Source:ZFIN;Acc:ZDB-GENE-040426-2490]
8. zgc:173702_1 ENSDARG00000110229 24 1.539 0.729 - 0.810 - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
9. CABZ01030107.1 ENSDARG00000058631 52 1.521 - - 0.790 - - 0.731 - - -
10. dcbld1 ENSDARG00000015907 36 1.495 0.745 0.750 - - - - - - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
11. jazf1a ENSDARG00000102551 767 1.486 - 0.769 - - 0.717 - - - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
12. elavl2 ENSDARG00000040732 44 1.481 0.729 - 0.752 - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
13. CABZ01071911.2 CABZ01071911.2 64 1.475 0.731 0.744 - - - - - - -
14. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.438 0.735 0.703 - - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
15. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 1.000 - - - - - - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
16. CABZ01079251.1 ENSDARG00000100498 38 0.958 0.958 - - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
17. wfs1b ENSDARG00000074617 69 0.958 0.958 - - - - - - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
18. aars2 ENSDARG00000107385 190 0.958 0.958 - - - - - - - - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
19. AVL9 ENSDARG00000055538 329 0.935 - 0.935 - - - - - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
20. ppp6r2b ENSDARG00000069654 323 0.922 - - - - - - 0.922 - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
21. colm colm 36 0.918 - 0.918 - - - - - - -
22. P2RY14 ENSDARG00000103305 41 0.918 - 0.918 - - - - - - - purinergic receptor P2Y14 [Source:HGNC Symbol;Acc:HGNC:16442]
23. mknk2a ENSDARG00000011373 230 0.917 - 0.917 - - - - - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
24. CABZ01028403.3 CABZ01028403.3 4 0.917 - 0.917 - - - - - - -
25. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.917 - 0.917 - - - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
26. nots ENSDARG00000099824 9 0.917 - 0.917 - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
27. zgc:174862 ENSDARG00000077571 201 0.917 - 0.917 - - - - - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
28. dscamb ENSDARG00000028118 82 0.917 - 0.917 - - - - - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
29. si:dkey-202n8.1 si:dkey-202n8.1 35 0.917 - 0.917 - - - - - - -
30. zgc:193682 zgc:193682 15 0.917 - 0.917 - - - - - - -
31. sc:d0661 sc:d0661 12 0.917 - 0.917 - - - - - - -
32. pou4f2 ENSDARG00000069737 451 0.917 - 0.917 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
33. CABZ01067743.1 CABZ01067743.1 48 0.917 - 0.917 - - - - - - -
34. CABZ01072511.1 CABZ01072511.1 88 0.917 - 0.917 - - - - - - -
35. fgf6b ENSDARG00000045856 136 0.917 - 0.917 - - - - - - - fibroblast growth factor 6b [Source:ZFIN;Acc:ZDB-GENE-050201-5]
36. CABZ01090951.1 CABZ01090951.1 78 0.917 - 0.917 - - - - - - -
37. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 0.917 - 0.917 - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
38. NHSL1 NHSL1 182 0.917 - 0.917 - - - - - - -
39. fbxw9 ENSDARG00000058020 28 0.915 - 0.915 - - - - - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
40. nrip2 ENSDARG00000079985 505 0.913 - - - - - 0.913 - - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
41. CU041386.1 CU041386.1 126 0.905 - 0.905 - - - - - - -
42. elovl4a ENSDARG00000006773 412 0.905 - 0.905 - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
43. 5S_rRNA 5S_rRNA 239 0.905 0.905 - - - - - - - -
44. poc5 ENSDARG00000059982 569 0.903 - 0.903 - - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
45. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 0.898 - - - - - 0.898 - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
46. VWA7 ENSDARG00000061462 816 0.898 - 0.898 - - - - - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
47. usp45 ENSDARG00000075013 227 0.897 - - - - - 0.897 - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
48. cldn7a ENSDARG00000036376, ENSDARG00000111721, ENSDARG00000115826 56 0.896 0.896 - - - - - - - - claudin 7a [Source:ZFIN;Acc:ZDB-GENE-040718-29]
49. CABZ01079192.1 ENSDARG00000101629 23 0.896 0.896 - - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
50. CR377211.1 ENSDARG00000079364 24 0.896 0.896 - - - - - - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
51. tbpl2 ENSDARG00000097302 70 0.896 0.896 - - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
52. CU467888.1 CU467888.1 30 0.896 0.896 - - - - - - - -
53. ugt2a5 ENSDARG00000011537, ENSDARG00000116508 56 0.896 0.896 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide A5 [Source:ZFIN;Acc:ZDB-GENE-060929-796]
54. gtpbp3 ENSDARG00000018650, ENSDARG00000111427 70 0.896 0.896 - - - - - - - - GTP binding protein 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050522-335]
55. RFTN1 RFTN1 140 0.892 - 0.892 - - - - - - -
56. samd13 ENSDARG00000062977 331 0.886 - - - - - 0.886 - - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
57. CCDC142 ENSDARG00000101377 161 0.886 - 0.886 - - - - - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
58. slc6a1a ENSDARG00000045944 260 0.886 - 0.886 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
59. mtpap ENSDARG00000076155, ENSDARG00000112828 272 0.882 - 0.882 - - - - - - - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
60. SLC39A8 ENSDARG00000056757 52 0.882 - 0.882 - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
61. DNAJC14 ENSDARG00000105398 20 0.882 - - - - - 0.882 - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
62. mfsd12b 8 0.882 - - - - - 0.882 - - - major facilitator superfamily domain containing 12b
63. foxd3 ENSDARG00000021032 11 0.882 - - - - - 0.882 - - - forkhead box D3 [Source:ZFIN;Acc:ZDB-GENE-980526-143]
64. MAST1 MAST1 29 0.882 - - - - - 0.882 - - -
65. zgc:113691 ENSDARG00000038898 36 0.882 - - - - - 0.882 - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
66. TTF1_5 TTF1_5 705 0.878 - 0.878 - - - - - - -
67. mep1a.1 ENSDARG00000029747 4 0.875 - - - - - 0.875 - - - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
68. hif1aa ENSDARG00000006181 109 0.873 - - - - - 0.873 - - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
69. ints12 ENSDARG00000091678 3261 0.873 0.873 - - - - - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
70. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.872 - 0.872 - - - - - - -
71. rnf144ab ENSDARG00000042557 136 0.871 - - - - - 0.871 - - - ring finger protein 144ab [Source:ZFIN;Acc:ZDB-GENE-040718-486]
72. CABZ01077218.1 ENSDARG00000089720 8 0.87 - 0.870 - - - - - - -
73. EPHB6 ENSDARG00000057729 223 0.87 - 0.870 - - - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
74. CHCHD5 ENSDARG00000091754 35 0.87 - 0.870 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
75. wasb ENSDARG00000026350 139 0.87 - 0.870 - - - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
76. si:dkey-9i5.1 si:dkey-9i5.1 36 0.87 - 0.870 - - - - - - -
77. SETDB2 ENSDARG00000101462 249 0.87 0.870 - - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
78. epdr1 ENSDARG00000045420 132 0.868 - 0.868 - - - - - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
79. zgc:153615 ENSDARG00000038981 105 0.868 0.868 - - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
80. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.868 - 0.868 - - - - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
81. BX005410.1 ENSDARG00000115561 373 0.861 - - - - 0.861 - - - - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
82. fbxo21 ENSDARG00000076611 466 0.859 - 0.859 - - - - - - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
83. nkx3.2 ENSDARG00000037639 575 0.857 - 0.857 - - - - - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
84. ZNF337_7 ZNF337_7 198 0.855 - 0.855 - - - - - - -
85. gas6 ENSDARG00000007804 405 0.854 - 0.854 - - - - - - - growth arrest-specific 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7773]
86. slx4ip ENSDARG00000039069 260 0.853 - 0.853 - - - - - - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
87. NAV1 NAV1 23 0.848 - 0.848 - - - - - - -
88. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 0.847 - 0.847 - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
89. si:ch211-253p18.2 ENSDARG00000092770 21 0.847 - 0.847 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
90. MUC5B MUC5B 1 0.847 - 0.847 - - - - - - -
91. si:ch211-67f13.8 ENSDARG00000079155 7 0.847 - 0.847 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
92. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 0.847 - 0.847 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
93. TENM2_1 ENSDARG00000037122 67 0.847 - 0.847 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
94. RBBP6_1 RBBP6_1 1 0.847 - 0.847 - - - - - - -
95. ADAP2 ENSDARG00000070565 29 0.847 - 0.847 - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
96. UNC13C 119 0.847 - 0.847 - - - - - - - unc-13 homolog C (C. elegans)
97. mrc1b ENSDARG00000038822 73 0.847 - 0.847 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
98. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 0.847 - 0.847 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
99. mcf2lb ENSDARG00000076480 50 0.847 - 0.847 - - - - - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
100. si:dkey-2j6.2 si:dkey-2j6.2 5 0.847 - 0.847 - - - - - - -

There are 622 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA